RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 CEBPBP17676 345 aa12.56□□□□□ -0.4
PCNA-201ENST00000379143 PFKLP17858 780 aa12.56□□□□□ -0.4
PCNA-201ENST00000379143 PSEN1P49768 467 aa12.56□□□□□ -0.4
PCNA-201ENST00000379143 USP46P62068 366 aa12.56□□□□□ -0.4
PCNA-201ENST00000379143 ZBED6P86452 979 aa12.56□□□□□ -0.4
PCNA-201ENST00000379143 ZP2Q05996 745 aa12.56□□□□□ -0.4
PCNA-201ENST00000379143 TAF10Q12962 218 aa12.56□□□□□ -0.4
PCNA-201ENST00000379143 TEAD2Q15562 447 aa12.56□□□□□ -0.4
PCNA-201ENST00000379143 MTSS1LQ765P7 747 aa12.56□□□□□ -0.4
PCNA-201ENST00000379143 CCDC186Q7Z3E2 898 aa12.56□□□□□ -0.4
PCNA-201ENST00000379143 SIX6OS1Q8N1H7 587 aa12.56□□□□□ -0.4
PCNA-201ENST00000379143 TMEM35BQ8NCS4 154 aa12.56□□□□□ -0.4
PCNA-201ENST00000379143 ING5Q8WYH8 240 aa12.56□□□□□ -0.4
PCNA-201ENST00000379143 NXPE3Q969Y0 559 aa12.56□□□□□ -0.4
PCNA-201ENST00000379143 SLITRK6Q9H5Y7 841 aa12.56□□□□□ -0.4
PCNA-201ENST00000379143 TASP1Q9H6P5 420 aa12.56□□□□□ -0.4
PCNA-201ENST00000379143 TLR8Q9NR97 1041 aaKnown RBP12.56□□□□□ -0.4
PCNA-201ENST00000379143 AIPL1Q9NZN9 384 aa12.56□□□□□ -0.4
PCNA-201ENST00000379143 CAPN11Q9UMQ6 739 aa12.56□□□□□ -0.4
PCNA-201ENST00000379143 LUC7L2Q9Y383 392 aaKnown RBP12.56□□□□□ -0.4
PCNA-201ENST00000379143 USP3Q9Y6I4 520 aa12.56□□□□□ -0.4
PCNA-201ENST00000379143 C2CD4DB7Z1M9 353 aa12.55□□□□□ -0.4
PCNA-201ENST00000379143 LSM8O95777 96 aaKnown RBP12.55□□□□□ -0.4
PCNA-201ENST00000379143 GJA1P17302 382 aa12.55□□□□□ -0.4
PCNA-201ENST00000379143 WEE1P30291 646 aa12.55□□□□□ -0.4
PCNA-201ENST00000379143 TKTL1P51854 596 aa12.55□□□□□ -0.4
PCNA-201ENST00000379143 CDR2Q01850 454 aa12.55□□□□□ -0.4
PCNA-201ENST00000379143 ARID5AQ03989 594 aa12.55□□□□□ -0.4
PCNA-201ENST00000379143 GPR158Q5T848 1215 aa12.55□□□□□ -0.4
PCNA-201ENST00000379143 SFMBT2Q5VUG0 894 aa12.55□□□□□ -0.4
PCNA-201ENST00000379143 SNX30Q5VWJ9 437 aa12.55□□□□□ -0.4
PCNA-201ENST00000379143 PMF1Q6P1K2 205 aa12.55□□□□□ -0.4
PCNA-201ENST00000379143 DENND1BQ6P3S1 775 aa12.55□□□□□ -0.4
PCNA-201ENST00000379143 TRIM72Q6ZMU5 477 aa12.55□□□□□ -0.4
PCNA-201ENST00000379143 GPRIN1Q7Z2K8 1008 aa12.55□□□□□ -0.4
PCNA-201ENST00000379143 TMEM150AQ86TG1 271 aa12.55□□□□□ -0.4
PCNA-201ENST00000379143 NOP9Q86U38 636 aaKnown RBP12.55□□□□□ -0.4
PCNA-201ENST00000379143 MON1AQ86VX9 555 aa12.55□□□□□ -0.4
PCNA-201ENST00000379143 VSTM4Q8IW00 320 aa12.55□□□□□ -0.4
PCNA-201ENST00000379143 SCML4Q8N228 414 aa12.55□□□□□ -0.4
PCNA-201ENST00000379143 ARHGAP18Q8N392 663 aa12.55□□□□□ -0.4
PCNA-201ENST00000379143 DDX1Q92499 740 aaKnown RBP12.55□□□□□ -0.4
PCNA-201ENST00000379143 SYN2Q92777 582 aaPredicted RBP12.55□□□□□ -0.4
PCNA-201ENST00000379143 MCRS1Q96EZ8 462 aa12.55□□□□□ -0.4
PCNA-201ENST00000379143 MYADMQ96S97 322 aa12.55□□□□□ -0.4
PCNA-201ENST00000379143 CNGB3Q9NQW8 809 aa12.55□□□□□ -0.4
PCNA-201ENST00000379143 NOCTQ9UK39 431 aaKnown RBP12.55□□□□□ -0.4
PCNA-201ENST00000379143 ZNF638Q14966 1978 aaKnown RBP12.54□□□□□ -0.4
PCNA-201ENST00000379143 ZNF840PA6NDX5 716 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 C19orf67A6NJJ6 358 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 TULP2O00295 520 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 SART1O43290 800 aaKnown RBP12.54□□□□□ -0.4
PCNA-201ENST00000379143 TADA3O75528 432 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 FBXO21O94952 628 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 ZBED1O96006 694 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 GYPCP04921 128 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 SP100P23497 879 aaPredicted RBP12.54□□□□□ -0.4
PCNA-201ENST00000379143 SSTR3P32745 418 aaPredicted RBP12.54□□□□□ -0.4
PCNA-201ENST00000379143 CDH5P33151 784 aaPredicted RBP12.54□□□□□ -0.4
PCNA-201ENST00000379143 AVPR1AP37288 418 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 RPL34P49207 117 aaKnown RBP12.54□□□□□ -0.4
PCNA-201ENST00000379143 TUBP50607 506 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 CYP4F8P98187 520 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 ADIGQ0VDE8 80 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 ASIC2Q16515 512 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 PM20D1Q6GTS8 502 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 IRF2BP2Q7Z5L9 587 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 TMEM110Q86TL2 294 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 MSANTD4Q8NCY6 345 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 ZSCAN18Q8TBC5 510 aaPredicted RBP12.54□□□□□ -0.4
PCNA-201ENST00000379143 IRGQQ8WZA9 623 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 E2F7Q96AV8 911 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 MRFAP1L1Q96HT8 127 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 MIS12Q9H081 205 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 ST7Q9NRC1 585 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 IGSF9Q9P2J2 1179 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 CHORDC1Q9UHD1 332 aaPredicted RBP12.54□□□□□ -0.4
PCNA-201ENST00000379143 BZW2Q9Y6E2 419 aaKnown RBP12.54□□□□□ -0.4
PCNA-201ENST00000379143 OBSL1O75147 1896 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 C5orf42Q9H799 3197 aa12.54□□□□□ -0.4
PCNA-201ENST00000379143 DENND4CQ5VZ89 1909 aa12.53□□□□□ -0.4
PCNA-201ENST00000379143 TRAV19A0A0A6YYK7 116 aa12.53□□□□□ -0.4
PCNA-201ENST00000379143 FAM86C2PA6NEL3 165 aa12.53□□□□□ -0.4
PCNA-201ENST00000379143 AP5Z1O43299 807 aa12.53□□□□□ -0.4
PCNA-201ENST00000379143 ABL1P00519 1130 aa12.53□□□□□ -0.4
PCNA-201ENST00000379143 MMEP08473 750 aa12.53□□□□□ -0.4
PCNA-201ENST00000379143 CFHP08603 1231 aa12.53□□□□□ -0.4
PCNA-201ENST00000379143 USP17L7P0C7H9 530 aa12.53□□□□□ -0.4
PCNA-201ENST00000379143 ZDHHC11BP0C7U3 371 aa12.53□□□□□ -0.4
PCNA-201ENST00000379143 LCP1P13796 627 aa12.53□□□□□ -0.4
PCNA-201ENST00000379143 CASP14P31944 242 aa12.53□□□□□ -0.4
PCNA-201ENST00000379143 PRKCIP41743 596 aa12.53□□□□□ -0.4
PCNA-201ENST00000379143 RGS7P49802 495 aa12.53□□□□□ -0.4
PCNA-201ENST00000379143 PDCLQ13371 301 aa12.53□□□□□ -0.4
PCNA-201ENST00000379143 TSR1Q2NL82 804 aaKnown RBP12.53□□□□□ -0.4
PCNA-201ENST00000379143 HECTD3Q5T447 861 aa12.53□□□□□ -0.4
PCNA-201ENST00000379143 TAF3Q5VWG9 929 aa12.53□□□□□ -0.4
PCNA-201ENST00000379143 TXNDC8Q6A555 127 aa12.53□□□□□ -0.4
PCNA-201ENST00000379143 PPP1R2P3Q6NXS1 205 aa12.53□□□□□ -0.4
PCNA-201ENST00000379143 TADA2BQ86TJ2 420 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms