RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 EXOC4Q96A65 974 aa20.07■□□□□ 0.8
TMEM88B-201ENST00000378821 SLITRK1Q96PX8 696 aa20.07■□□□□ 0.8
TMEM88B-201ENST00000378821 KCNK16Q96T55 309 aa20.07■□□□□ 0.8
TMEM88B-201ENST00000378821 NUP62CLQ9H1M0 184 aa20.07■□□□□ 0.8
TMEM88B-201ENST00000378821 CSNK1G1Q9HCP0 422 aa20.07■□□□□ 0.8
TMEM88B-201ENST00000378821 DLL3Q9NYJ7 618 aa20.07■□□□□ 0.8
TMEM88B-201ENST00000378821 ATP8B3O60423 1300 aa20.06■□□□□ 0.8
TMEM88B-201ENST00000378821 CACNA1AO00555 2505 aa20.06■□□□□ 0.8
TMEM88B-201ENST00000378821 GOLGA6L22H0YM25 854 aa20.06■□□□□ 0.8
TMEM88B-201ENST00000378821 LEFTY2O00292 366 aa20.06■□□□□ 0.8
TMEM88B-201ENST00000378821 ZDHHC11BP0C7U3 371 aa20.06■□□□□ 0.8
TMEM88B-201ENST00000378821 EPB41P11171 864 aaKnown RBP20.06■□□□□ 0.8
TMEM88B-201ENST00000378821 YWHAQP27348 245 aa20.06■□□□□ 0.8
TMEM88B-201ENST00000378821 ASPAP45381 313 aa20.06■□□□□ 0.8
TMEM88B-201ENST00000378821 IFNAR2P48551 515 aa20.06■□□□□ 0.8
TMEM88B-201ENST00000378821 PPP3CAQ08209 521 aa20.06■□□□□ 0.8
TMEM88B-201ENST00000378821 GAB4Q2WGN9 574 aa20.06■□□□□ 0.8
TMEM88B-201ENST00000378821 TTI2Q6NXR4 508 aa20.06■□□□□ 0.8
TMEM88B-201ENST00000378821 FAM35AQ86V20 835 aa20.06■□□□□ 0.8
TMEM88B-201ENST00000378821 PDZD8Q8NEN9 1154 aa20.06■□□□□ 0.8
TMEM88B-201ENST00000378821 ELMO3Q96BJ8 720 aa20.06■□□□□ 0.8
TMEM88B-201ENST00000378821 SMARCD1Q96GM5 515 aa20.06■□□□□ 0.8
TMEM88B-201ENST00000378821 DUSP9Q99956 384 aaKnown RBP20.06■□□□□ 0.8
TMEM88B-201ENST00000378821 MYH10P35580 1976 aa20.06■□□□□ 0.8
TMEM88B-201ENST00000378821 SLC16A3O15427 465 aaKnown RBP20.05■□□□□ 0.8
TMEM88B-201ENST00000378821 LRP3O75074 770 aa20.05■□□□□ 0.8
TMEM88B-201ENST00000378821 HLA-DRAP01903 254 aa20.05■□□□□ 0.8
TMEM88B-201ENST00000378821 HOXC13P31276 330 aa20.05■□□□□ 0.8
TMEM88B-201ENST00000378821 INCA1Q0VD86 236 aa20.05■□□□□ 0.8
TMEM88B-201ENST00000378821 NR1H3Q13133 447 aa20.05■□□□□ 0.8
TMEM88B-201ENST00000378821 NAIF1Q69YI7 327 aaPredicted RBP20.05■□□□□ 0.8
TMEM88B-201ENST00000378821 ACOT1Q86TX2 421 aa20.05■□□□□ 0.8
TMEM88B-201ENST00000378821 ADGRG2Q8IZP9 1017 aa20.05■□□□□ 0.8
TMEM88B-201ENST00000378821 ZMIZ2Q8NF64 920 aa20.05■□□□□ 0.8
TMEM88B-201ENST00000378821 CD101Q93033 1021 aa20.05■□□□□ 0.8
TMEM88B-201ENST00000378821 DMAP1Q9NPF5 467 aaPredicted RBP20.05■□□□□ 0.8
TMEM88B-201ENST00000378821 RNF40O75150 1001 aa20.04■□□□□ 0.8
TMEM88B-201ENST00000378821 NFATC1O95644 943 aa20.04■□□□□ 0.8
TMEM88B-201ENST00000378821 RETP07949 1114 aa20.04■□□□□ 0.8
TMEM88B-201ENST00000378821 GCLMP48507 274 aa20.04■□□□□ 0.8
TMEM88B-201ENST00000378821 TUBP50607 506 aa20.04■□□□□ 0.8
TMEM88B-201ENST00000378821 NDST1P52848 882 aa20.04■□□□□ 0.8
TMEM88B-201ENST00000378821 STX17P56962 302 aa20.04■□□□□ 0.8
TMEM88B-201ENST00000378821 PAK1Q13153 545 aa20.04■□□□□ 0.8
TMEM88B-201ENST00000378821 SCARA5Q6ZMJ2 495 aa20.04■□□□□ 0.8
TMEM88B-201ENST00000378821 CAMKK1Q8N5S9 505 aa20.04■□□□□ 0.8
TMEM88B-201ENST00000378821 SCAMP5Q8TAC9 235 aa20.04■□□□□ 0.8
TMEM88B-201ENST00000378821 SMOQ99835 787 aa20.04■□□□□ 0.8
TMEM88B-201ENST00000378821 MMRN2Q9H8L6 949 aa20.04■□□□□ 0.8
TMEM88B-201ENST00000378821 RAB23Q9ULC3 237 aa20.04■□□□□ 0.8
TMEM88B-201ENST00000378821 CPQQ9Y646 472 aa20.04■□□□□ 0.8
TMEM88B-201ENST00000378821 EML5Q05BV3 1969 aa20.03■□□□□ 0.8
TMEM88B-201ENST00000378821 ATG2BQ96BY7 2078 aa20.03■□□□□ 0.8
TMEM88B-201ENST00000378821 BICDL2A1A5D9 508 aa20.03■□□□□ 0.8
TMEM88B-201ENST00000378821 SLC9A3R1O14745 358 aaPredicted RBP20.03■□□□□ 0.8
TMEM88B-201ENST00000378821 GTF2H1P32780 548 aa20.03■□□□□ 0.8
TMEM88B-201ENST00000378821 OPRD1P41143 372 aa20.03■□□□□ 0.8
TMEM88B-201ENST00000378821 PIK3CAP42336 1068 aa20.03■□□□□ 0.8
TMEM88B-201ENST00000378821 SLC5A3P53794 718 aa20.03■□□□□ 0.8
TMEM88B-201ENST00000378821 SIM2Q14190 667 aaPredicted RBP20.03■□□□□ 0.8
TMEM88B-201ENST00000378821 PUM1Q14671 1186 aaKnown RBP eCLIP20.03■□□□□ 0.8
TMEM88B-201ENST00000378821 SPOPLQ6IQ16 392 aa20.03■□□□□ 0.8
TMEM88B-201ENST00000378821 FOXR2Q6PJQ5 311 aa20.03■□□□□ 0.8
TMEM88B-201ENST00000378821 DDX42Q86XP3 938 aaKnown RBP eCLIP20.03■□□□□ 0.8
TMEM88B-201ENST00000378821 FAXDC2Q96IV6 333 aa20.03■□□□□ 0.8
TMEM88B-201ENST00000378821 ZFRQ96KR1 1074 aaKnown RBP20.03■□□□□ 0.8
TMEM88B-201ENST00000378821 CEP63Q96MT8 703 aa20.03■□□□□ 0.8
TMEM88B-201ENST00000378821 CYP3A43Q9HB55 503 aa20.03■□□□□ 0.8
TMEM88B-201ENST00000378821 APOBEC3GQ9HC16 384 aaKnown RBP20.03■□□□□ 0.8
TMEM88B-201ENST00000378821 PARD6AQ9NPB6 346 aa20.03■□□□□ 0.8
TMEM88B-201ENST00000378821 HMGXB4Q9UGU5 601 aa20.03■□□□□ 0.8
TMEM88B-201ENST00000378821 GMEB2Q9UKD1 530 aa20.03■□□□□ 0.8
TMEM88B-201ENST00000378821 CEP250Q9BV73 2442 aa20.03■□□□□ 0.8
TMEM88B-201ENST00000378821 AP1G2O75843 785 aa20.02■□□□□ 0.8
TMEM88B-201ENST00000378821 BEST1O76090 585 aa20.02■□□□□ 0.8
TMEM88B-201ENST00000378821 CLSTN1O94985 981 aa20.02■□□□□ 0.8
TMEM88B-201ENST00000378821 SRSF5Q13243 272 aaKnown RBP20.02■□□□□ 0.8
TMEM88B-201ENST00000378821 DCAF17Q5H9S7 520 aaPredicted RBP20.02■□□□□ 0.8
TMEM88B-201ENST00000378821 SYT13Q7L8C5 426 aa20.02■□□□□ 0.8
TMEM88B-201ENST00000378821 FILIP1Q7Z7B0 1213 aa20.02■□□□□ 0.8
TMEM88B-201ENST00000378821 TAS1R2Q8TE23 839 aa20.02■□□□□ 0.8
TMEM88B-201ENST00000378821 FBXO32Q969P5 355 aa20.02■□□□□ 0.8
TMEM88B-201ENST00000378821 HNRNPABQ99729 332 aaKnown RBP20.02■□□□□ 0.8
TMEM88B-201ENST00000378821 MED10Q9BTT4 135 aa20.02■□□□□ 0.8
TMEM88B-201ENST00000378821 TMEM8AQ9HCN3 771 aa20.02■□□□□ 0.8
TMEM88B-201ENST00000378821 KRT82Q9NSB4 513 aa20.02■□□□□ 0.8
TMEM88B-201ENST00000378821 CHORDC1Q9UHD1 332 aaPredicted RBP20.02■□□□□ 0.8
TMEM88B-201ENST00000378821 A0A0A0MRY4 1105 aa20.01■□□□□ 0.79
TMEM88B-201ENST00000378821 E2F8A0AVK6 867 aa20.01■□□□□ 0.79
TMEM88B-201ENST00000378821 PRR5-ARHGAP8B1AHC4 643 aa20.01■□□□□ 0.79
TMEM88B-201ENST00000378821 COCHO43405 550 aa20.01■□□□□ 0.79
TMEM88B-201ENST00000378821 CYP17A1P05093 508 aa20.01■□□□□ 0.79
TMEM88B-201ENST00000378821 CCDC130P13994 396 aa20.01■□□□□ 0.79
TMEM88B-201ENST00000378821 SDHBP21912 280 aa20.01■□□□□ 0.79
TMEM88B-201ENST00000378821 ARHGAP8P85298 464 aa20.01■□□□□ 0.79
TMEM88B-201ENST00000378821 LMNB2Q03252 620 aa20.01■□□□□ 0.79
TMEM88B-201ENST00000378821 HECTD3Q5T447 861 aa20.01■□□□□ 0.79
TMEM88B-201ENST00000378821 HEATR6Q6AI08 1181 aaKnown RBP20.01■□□□□ 0.79
TMEM88B-201ENST00000378821 C12orf29Q8N999 325 aa20.01■□□□□ 0.79
TMEM88B-201ENST00000378821 CCDC26Q8TAB7 109 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms