RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 L1CAMP32004 1257 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 DSG3P32926 999 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 FDFT1P37268 417 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 HSD17B4P51659 736 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 ZNF132P52740 706 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 NR1H2P55055 460 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 FAAP100Q0VG06 881 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 GRM1Q13255 1194 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 SLFN12LQ6IEE8 588 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 APOBEC3HQ6NTF7 200 aaKnown RBP8.53□□□□□ -1.04
PTPRR-203ENST00000378778 NUP93Q8N1F7 819 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 GLIS1Q8NBF1 620 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 MCUQ8NE86 351 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 DLG3Q92796 817 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 RTP4Q96DX8 246 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 SERAC1Q96JX3 654 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 SERPINI1Q99574 410 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 ACP6Q9NPH0 428 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 PAK5Q9P286 719 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 SRP68Q9UHB9 627 aaKnown RBP8.53□□□□□ -1.04
PTPRR-203ENST00000378778 PCDHGC3Q9UN70 934 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 USTQ9Y2C2 406 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 SF3B1O75533 1304 aaKnown RBP eCLIP8.53□□□□□ -1.04
PTPRR-203ENST00000378778 TCRBV9S1A1TA0A576 114 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 KLRG2A4D1S0 409 aaPredicted RBP8.53□□□□□ -1.04
PTPRR-203ENST00000378778 C3orf70A6NLC5 250 aaPredicted RBP8.53□□□□□ -1.04
PTPRR-203ENST00000378778 MCF2LO15068 1137 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 PFDN1O60925 122 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 HLA-DRAP01903 254 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 C4BPAP04003 597 aaKnown RBP8.53□□□□□ -1.04
PTPRR-203ENST00000378778 ZSCAN5DPP0CG00 497 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 ARP10275 920 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 PROZP22891 400 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 EIF4BP23588 611 aaKnown RBP8.53□□□□□ -1.04
PTPRR-203ENST00000378778 ADSLP30566 484 aaPredicted RBP8.53□□□□□ -1.04
PTPRR-203ENST00000378778 PEX3P56589 373 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 KRT76Q01546 638 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 MSLNQ13421 630 aaPredicted RBP8.53□□□□□ -1.04
PTPRR-203ENST00000378778 SNAPC2Q13487 334 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 KCNJ11Q14654 390 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 INSCQ1MX18 579 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 BBS9Q3SYG4 887 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 FAM47CQ5HY64 1035 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 RARS2Q5T160 578 aaKnown RBP8.53□□□□□ -1.04
PTPRR-203ENST00000378778 XRRA1Q6P2D8 792 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 RAPH1Q70E73 1250 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 SETD3Q86TU7 594 aaPredicted RBP8.53□□□□□ -1.04
PTPRR-203ENST00000378778 TTC7BQ86TV6 843 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 ALYREFQ86V81 257 aaKnown RBP8.53□□□□□ -1.04
PTPRR-203ENST00000378778 KBTBD6Q86V97 674 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 MCF2L2Q86YR7 1114 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 ARID3BQ8IVW6 561 aaPredicted RBP8.53□□□□□ -1.04
PTPRR-203ENST00000378778 MCPH1Q8NEM0 835 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 POMGNT1Q8WZA1 660 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 CCDC127Q96BQ5 260 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 BIRC8Q96P09 236 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 ACAP3Q96P50 834 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 PREBQ9HCU5 417 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 KMT5AQ9NQR1 393 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 GINM1Q9NU53 330 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 MRGBPQ9NV56 204 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 POLLQ9UGP5 575 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 TCEAL9Q9UHQ7 104 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 ZNF510Q9Y2H8 683 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 DTNAQ9Y4J8 743 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 PCDHB4Q9Y5E5 795 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 UBIAD1Q9Y5Z9 338 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 BTAF1O14981 1849 aa8.53□□□□□ -1.04
PTPRR-203ENST00000378778 C15orf38-AP3S2A0A0A6YYH1 394 aa8.52□□□□□ -1.04
PTPRR-203ENST00000378778 DHX15O43143 795 aaKnown RBP8.52□□□□□ -1.04
PTPRR-203ENST00000378778 CFBP00751 764 aa8.52□□□□□ -1.04
PTPRR-203ENST00000378778 PIGRP01833 764 aa8.52□□□□□ -1.04
PTPRR-203ENST00000378778 SMIM18P0DKX4 95 aa8.52□□□□□ -1.04
PTPRR-203ENST00000378778 KRT10P13645 584 aa8.52□□□□□ -1.04
PTPRR-203ENST00000378778 HMGB2P26583 209 aaKnown RBP8.52□□□□□ -1.04
PTPRR-203ENST00000378778 NPTX2P47972 431 aa8.52□□□□□ -1.04
PTPRR-203ENST00000378778 AQP5P55064 265 aa8.52□□□□□ -1.04
PTPRR-203ENST00000378778 YWHAEP62258 255 aaKnown RBP8.52□□□□□ -1.04
PTPRR-203ENST00000378778 FOLH1Q04609 750 aa8.52□□□□□ -1.04
PTPRR-203ENST00000378778 TMED1Q13445 227 aa8.52□□□□□ -1.04
PTPRR-203ENST00000378778 DPYSL3Q14195 570 aa8.52□□□□□ -1.04
PTPRR-203ENST00000378778 RABGAP1LQ5R372 815 aa8.52□□□□□ -1.04
PTPRR-203ENST00000378778 CC2D2BQ6DHV5 1058 aa8.52□□□□□ -1.04
PTPRR-203ENST00000378778 DCUN1D2Q6PH85 259 aa8.52□□□□□ -1.04
PTPRR-203ENST00000378778 DHRS4L2Q6PKH6 230 aa8.52□□□□□ -1.04
PTPRR-203ENST00000378778 ARPINQ7Z6K5 226 aa8.52□□□□□ -1.04
PTPRR-203ENST00000378778 RNF168Q8IYW5 571 aaPredicted RBP8.52□□□□□ -1.04
PTPRR-203ENST00000378778 UBR7Q8N806 425 aa8.52□□□□□ -1.04
PTPRR-203ENST00000378778 PIWIL2Q8TC59 973 aaKnown RBP8.52□□□□□ -1.04
PTPRR-203ENST00000378778 RTKNQ9BST9 563 aa8.52□□□□□ -1.04
PTPRR-203ENST00000378778 TMEM121Q9BTD3 319 aa8.52□□□□□ -1.04
PTPRR-203ENST00000378778 RBM38Q9H0Z9 239 aaKnown RBP8.52□□□□□ -1.04
PTPRR-203ENST00000378778 RSAD1Q9HA92 442 aa8.52□□□□□ -1.04
PTPRR-203ENST00000378778 AGO4Q9HCK5 861 aaKnown RBP8.52□□□□□ -1.04
PTPRR-203ENST00000378778 ZNHIT2Q9UHR6 403 aa8.52□□□□□ -1.04
PTPRR-203ENST00000378778 AGTPBP1Q9UPW5 1226 aa8.52□□□□□ -1.04
PTPRR-203ENST00000378778 TELO2Q9Y4R8 837 aa8.52□□□□□ -1.04
PTPRR-203ENST00000378778 IVNS1ABPQ9Y6Y0 642 aa8.52□□□□□ -1.04
PTPRR-203ENST00000378778 GOLGA8IPA6NC78 632 aa8.52□□□□□ -1.05
PTPRR-203ENST00000378778 GOLGA8JA6NMD2 632 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms