RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 ANP32DO95626 131 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 HMGCRP04035 888 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 MCF2P10911 925 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 GBP2P32456 591 aaPredicted RBP20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 OVGP1Q12889 678 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 OR6B2Q6IFH4 312 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 ZNF449Q6P9G9 518 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 SERAC1Q96JX3 654 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 CNPY3Q9BT09 278 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 VRTNQ9H8Y1 702 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 GPATCH2LQ9NWQ4 482 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 RBPJLQ9UBG7 517 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 TCRBV9S1A1TA0A576 114 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 CBX6O95503 412 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 PFKMP08237 780 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 RPSAP08865 295 aaKnown RBP20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 PHKA2P46019 1235 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 GCLCP48506 637 aaPredicted RBP20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 PTK7Q13308 1070 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 KBTBD12Q3ZCT8 623 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 ILDR2Q71H61 639 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 NLRP9Q7RTR0 991 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 RFWD2Q8NHY2 731 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 SLC7A6OSQ96CW6 309 aaPredicted RBP20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 FAXDC2Q96IV6 333 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 MMP19Q99542 508 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 MPHOSPH6Q99547 160 aaKnown RBP20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 CYP3A43Q9HB55 503 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 TSPAN16Q9UKR8 245 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 C15orf41Q9Y2V0 281 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 TEX264Q9Y6I9 313 aa20.36■□□□□ 0.85
SHROOM1-202ENST00000378676 PDGFRAP16234 1089 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 ATICP31939 592 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 SLC26A2P50443 739 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 RALGAPA2Q2PPJ7 1873 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 CYTH2Q99418 400 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 NFKBIZQ9BYH8 718 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 H7C0C1 242 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 SMAPO00193 183 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 TM9SF1O15321 606 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 MAP3K6O95382 1288 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 SLC25A27O95847 323 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 INSRRP14616 1297 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 TSHRP16473 764 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 ARF4P18085 180 aaPredicted RBP20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 CCND1P24385 295 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 ALDH3A1P30838 453 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 ATP5OP48047 213 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 RGS7P49802 495 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 INCA1Q0VD86 236 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 FAAP100Q0VG06 881 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 TMEM132DQ14C87 1099 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 SEPT7Q16181 437 aaKnown RBP20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 FAM187BQ17R55 369 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 WDR78Q5VTH9 848 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 GPC2Q8N158 579 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 C12orf29Q8N999 325 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 LRRN4Q8WUT4 740 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 NSMCE1Q8WV22 266 aa20.35■□□□□ 0.85
SHROOM1-202ENST00000378676 VTNP04004 478 aa20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 YWHAGP61981 247 aaKnown RBP eCLIP20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 KCTD2Q14681 263 aa20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 TAF1BQ53T94 588 aaPredicted RBP20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 FAXCQ5TGI0 409 aa20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 MOB2Q70IA6 237 aa20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 RNF157Q96PX1 679 aa20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 RAB3IPQ96QF0 476 aaPredicted RBP20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 USP29Q9HBJ7 922 aa20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 BARX2Q9UMQ3 279 aaPredicted RBP20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 SBF1O95248 1867 aa20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 ZNF638Q14966 1978 aaKnown RBP20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 C2CD2LO14523 706 aa20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 NEK3P51956 506 aa20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 ATP11AP98196 1134 aa20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 TNFAIP2Q03169 654 aa20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 PARP6Q2NL67 630 aa20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 PRPF39Q86UA1 669 aaKnown RBP20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 LINC01465Q8N7H1 131 aa20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 SLC44A1Q8WWI5 657 aa20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 FAF2Q96CS3 445 aa20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 ASB7Q9H672 318 aa20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 GBA2Q9HCG7 927 aaPredicted RBP20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 NOP53Q9NZM5 478 aaKnown RBP20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 DCTN4Q9UJW0 460 aa20.34■□□□□ 0.85
SHROOM1-202ENST00000378676 LPXNO60711 386 aa20.33■□□□□ 0.85
SHROOM1-202ENST00000378676 ATP5HO75947 161 aa20.33■□□□□ 0.85
SHROOM1-202ENST00000378676 MT-ND3P03897 115 aa20.33■□□□□ 0.85
SHROOM1-202ENST00000378676 IL4RP24394 825 aa20.33■□□□□ 0.85
SHROOM1-202ENST00000378676 YWHAZP63104 245 aaKnown RBP20.33■□□□□ 0.85
SHROOM1-202ENST00000378676 GOLGA7BQ2TAP0 167 aa20.33■□□□□ 0.85
SHROOM1-202ENST00000378676 CCDC14Q49A88 953 aa20.33■□□□□ 0.85
SHROOM1-202ENST00000378676 LCLAT1Q6UWP7 414 aa20.33■□□□□ 0.85
SHROOM1-202ENST00000378676 PQLC3Q8N755 202 aa20.33■□□□□ 0.85
SHROOM1-202ENST00000378676 PLD5Q8N7P1 536 aa20.33■□□□□ 0.85
SHROOM1-202ENST00000378676 ALKBH8Q96BT7 664 aaKnown RBP20.33■□□□□ 0.85
SHROOM1-202ENST00000378676 CFAP36Q96G28 342 aa20.33■□□□□ 0.85
SHROOM1-202ENST00000378676 CXCL16Q9H2A7 254 aa20.33■□□□□ 0.85
SHROOM1-202ENST00000378676 ERAP1Q9NZ08 941 aa20.33■□□□□ 0.85
SHROOM1-202ENST00000378676 TTLL3Q9Y4R7 772 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms