RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 ARMCX1Q9P291 453 aa17.32■□□□□ 0.36
PCDHA1-201ENST00000378133 RLFQ13129 1914 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 DLDP09622 509 aaKnown RBP17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 PYGBP11216 843 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 PHBP35232 272 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 CPA2P48052 419 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 TFAMQ00059 246 aaKnown RBP17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 TRPC3Q13507 836 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 CNPY1Q3B7I2 92 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 LRRC23Q53EV4 343 aaPredicted RBP17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 ADGRD1Q6QNK2 874 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 IZUMO2Q6UXV1 221 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 RHPN2Q8IUC4 686 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 KIAA0319LQ8IZA0 1049 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 ARFGAP1Q8N6T3 406 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 JOSD2Q8TAC2 188 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 PRPF31Q8WWY3 499 aaKnown RBP17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 JDP2Q8WYK2 163 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 CPT1BQ92523 772 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 PAFAH2Q99487 392 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 ZNF518BQ9C0D4 1074 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 B2RBV5 119 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 FCHO1O14526 889 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 FAM189A1O60320 539 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 EIF4BP23588 611 aaKnown RBP17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 ERFP50548 548 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 TAP1Q03518 808 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 DUOXA2Q1HG44 320 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 DENND1BQ6P3S1 775 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 NIPA2Q8N8Q9 360 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 CCDC110Q8TBZ0 833 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 ALKBH8Q96BT7 664 aaKnown RBP17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 OXNAD1Q96HP4 312 aaPredicted RBP17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 PCYT2Q99447 389 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 AS3MTQ9HBK9 375 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 SNCAIPQ9Y6H5 919 aa17.31■□□□□ 0.36
PCDHA1-201ENST00000378133 TCRBV7S3A2A0A539 114 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 PEX10O60683 326 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 TGDSO95455 350 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 ITGBL1O95965 494 aaPredicted RBP17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 CD48P09326 243 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 SRGAP2CP0DJJ0 459 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 MYL2P10916 166 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 KRT3P12035 628 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 ANPEPP15144 967 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 RAP1GDS1P52306 607 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 ARL4CP56559 192 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 DSG1Q02413 1049 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 PTPN20Q4JDL3 420 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 PPIL6Q8IXY8 311 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 FAM81AQ8TBF8 368 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 AZIN2Q96A70 460 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 TUBGCP5Q96RT8 1024 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 SPATA16Q9BXB7 569 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 VCX3BQ9H321 246 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 VCX3AQ9NNX9 186 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 CHCHD3Q9NX63 227 aaKnown RBP17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 F8W8V4 182 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 MSCO60682 206 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 LRCH4O75427 683 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 CD19P15391 556 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 RPL22P35268 128 aaKnown RBP17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 RANBP1P43487 201 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 PCGF5Q86SE9 256 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 EMC1Q8N766 993 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 RSAD2Q8WXG1 361 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 DTNBP1Q96EV8 351 aa17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 WDR83Q9BRX9 315 aaKnown RBP17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 NXF1Q9UBU9 619 aaKnown RBP17.3■□□□□ 0.36
PCDHA1-201ENST00000378133 LPXNO60711 386 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 TOM1L1O75674 476 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 AP3M2P53677 418 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 HIRAP54198 1017 aaPredicted RBP17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 ZNF280AP59817 542 aaPredicted RBP17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 OSTNP61366 133 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 SLC25A11Q02978 314 aaKnown RBP17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 TARBP2Q15633 366 aaKnown RBP17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 ZPBP2Q6X784 338 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 CATSPERGQ6ZRH7 1159 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 TMPRSS6Q8IU80 811 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 NAT8LQ8N9F0 302 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 FBXO36Q8NEA4 188 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 NDNQ99608 321 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 UBE2OQ9C0C9 1292 aaKnown RBP17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 NMUR2Q9GZQ4 415 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 NRBP2Q9NSY0 501 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 PCSK1NQ9UHG2 260 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 CYTH4Q9UIA0 394 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 H3BRJ5 948 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 MAGEC1O60732 1142 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 LGR5O75473 907 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 CDH5P33151 784 aaPredicted RBP17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 NRLP54845 237 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 PRKD1Q15139 912 aaPredicted RBP17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 FAM182AQ5T1J6 154 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 ANKRD23Q86SG2 305 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 UNC45BQ8IWX7 931 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 ATP11CQ8NB49 1132 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 MZB1Q8WU39 189 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms