RNA–Protein interactions for RNA: ENST00000377759.8

SNX5-201, Transcript of sorting nexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX5, Length 2,270 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-201ENST00000377759 SLC4A5Q9BY07 1137 aa25.07■■□□□ 1.6
SNX5-201ENST00000377759 GPATCH2LQ9NWQ4 482 aa25.07■■□□□ 1.6
SNX5-201ENST00000377759 PLXNB2O15031 1838 aa25.07■■□□□ 1.6
SNX5-201ENST00000377759 DPYSL4O14531 572 aa25.07■■□□□ 1.6
SNX5-201ENST00000377759 NPTXRO95502 500 aa25.07■■□□□ 1.6
SNX5-201ENST00000377759 HOXD8P13378 290 aaPredicted RBP25.07■■□□□ 1.6
SNX5-201ENST00000377759 CA4P22748 312 aa25.07■■□□□ 1.6
SNX5-201ENST00000377759 ACVR2BQ13705 512 aa25.07■■□□□ 1.6
SNX5-201ENST00000377759 PDK4Q16654 411 aa25.07■■□□□ 1.6
SNX5-201ENST00000377759 KIZQ2M2Z5 673 aa25.07■■□□□ 1.6
SNX5-201ENST00000377759 ZNF410Q86VK4 478 aa25.07■■□□□ 1.6
SNX5-201ENST00000377759 PQLC3Q8N755 202 aa25.07■■□□□ 1.6
SNX5-201ENST00000377759 PLD5Q8N7P1 536 aa25.07■■□□□ 1.6
SNX5-201ENST00000377759 GTF3C2Q8WUA4 911 aaPredicted RBP25.07■■□□□ 1.6
SNX5-201ENST00000377759 DCAKDQ8WVC6 231 aa25.07■■□□□ 1.6
SNX5-201ENST00000377759 MIS12Q9H081 205 aa25.07■■□□□ 1.6
SNX5-201ENST00000377759 RXFP1Q9HBX9 757 aa25.07■■□□□ 1.6
SNX5-201ENST00000377759 CD248Q9HCU0 757 aa25.07■■□□□ 1.6
SNX5-201ENST00000377759 KRT4P19013 534 aa25.06■■□□□ 1.6
SNX5-201ENST00000377759 RNASELQ05823 741 aaKnown RBP25.06■■□□□ 1.6
SNX5-201ENST00000377759 TFDP2Q14188 446 aa25.06■■□□□ 1.6
SNX5-201ENST00000377759 KCNJ11Q14654 390 aa25.06■■□□□ 1.6
SNX5-201ENST00000377759 STILQ15468 1287 aa25.06■■□□□ 1.6
SNX5-201ENST00000377759 ZC3H12AQ5D1E8 599 aaKnown RBP25.06■■□□□ 1.6
SNX5-201ENST00000377759 FAM47CQ5HY64 1035 aa25.06■■□□□ 1.6
SNX5-201ENST00000377759 C1orf228Q6PIY5 440 aa25.06■■□□□ 1.6
SNX5-201ENST00000377759 ZNF467Q7Z7K2 595 aaPredicted RBP25.06■■□□□ 1.6
SNX5-201ENST00000377759 SLC10A4Q96EP9 437 aa25.06■■□□□ 1.6
SNX5-201ENST00000377759 L3MBTL3Q96JM7 780 aaPredicted RBP25.06■■□□□ 1.6
SNX5-201ENST00000377759 ADAMTS10Q9H324 1103 aa25.06■■□□□ 1.6
SNX5-201ENST00000377759 SSU72Q9NP77 194 aaKnown RBP25.06■■□□□ 1.6
SNX5-201ENST00000377759 SLCO1B3Q9NPD5 702 aa25.06■■□□□ 1.6
SNX5-201ENST00000377759 SNTG2Q9NY99 539 aa25.06■■□□□ 1.6
SNX5-201ENST00000377759 SNX9Q9Y5X1 595 aa25.06■■□□□ 1.6
SNX5-201ENST00000377759 PDHXO00330 501 aa25.06■■□□□ 1.6
SNX5-201ENST00000377759 MMP3P08254 477 aa25.06■■□□□ 1.6
SNX5-201ENST00000377759 FGFR1P11362 822 aa25.06■■□□□ 1.6
SNX5-201ENST00000377759 RDXP35241 583 aaKnown RBP25.06■■□□□ 1.6
SNX5-201ENST00000377759 ZBTB6Q15916 424 aa25.06■■□□□ 1.6
SNX5-201ENST00000377759 TMEM110Q86TL2 294 aa25.06■■□□□ 1.6
SNX5-201ENST00000377759 PALM2Q8IXS6 379 aa25.06■■□□□ 1.6
SNX5-201ENST00000377759 SLC35F5Q8WV83 523 aa25.06■■□□□ 1.6
SNX5-201ENST00000377759 ECT2Q9H8V3 914 aa25.06■■□□□ 1.6
SNX5-201ENST00000377759 FAM49BQ9NUQ9 324 aa25.06■■□□□ 1.6
SNX5-201ENST00000377759 STARD13Q9Y3M8 1113 aa25.06■■□□□ 1.6
SNX5-201ENST00000377759 CA9Q16790 459 aa25.05■■□□□ 1.6
SNX5-201ENST00000377759 KLHL38Q2WGJ6 581 aa25.05■■□□□ 1.6
SNX5-201ENST00000377759 SWT1Q5T5J6 900 aaKnown RBP25.05■■□□□ 1.6
SNX5-201ENST00000377759 SCUBE3Q8IX30 993 aa25.05■■□□□ 1.6
SNX5-201ENST00000377759 GBP7Q8N8V2 638 aaPredicted RBP25.05■■□□□ 1.6
SNX5-201ENST00000377759 LPIN3Q9BQK8 851 aa25.05■■□□□ 1.6
SNX5-201ENST00000377759 SETD4Q9NVD3 440 aa25.05■■□□□ 1.6
SNX5-201ENST00000377759 KLHL14Q9P2G3 628 aa25.05■■□□□ 1.6
SNX5-201ENST00000377759 TUBGCP4Q9UGJ1 667 aa25.05■■□□□ 1.6
SNX5-201ENST00000377759 PHTF1Q9UMS5 762 aa25.05■■□□□ 1.6
SNX5-201ENST00000377759 CHMP2BQ9UQN3 213 aa25.05■■□□□ 1.6
SNX5-201ENST00000377759 PAPSS1O43252 624 aaPredicted RBP25.05■■□□□ 1.6
SNX5-201ENST00000377759 TSHRP16473 764 aa25.05■■□□□ 1.6
SNX5-201ENST00000377759 ELK3P41970 407 aa25.05■■□□□ 1.6
SNX5-201ENST00000377759 DCAF4L1Q3SXM0 396 aa25.05■■□□□ 1.6
SNX5-201ENST00000377759 TBC1D1Q86TI0 1168 aaPredicted RBP25.05■■□□□ 1.6
SNX5-201ENST00000377759 AGGF1Q8N302 714 aaeCLIP25.05■■□□□ 1.66e-11■■□□□ 11.8
SNX5-201ENST00000377759 EIF2AQ9BY44 585 aaKnown RBP25.05■■□□□ 1.6
SNX5-201ENST00000377759 PLEKHA5Q9HAU0 1116 aa25.05■■□□□ 1.6
SNX5-201ENST00000377759 PCDH18Q9HCL0 1135 aa25.05■■□□□ 1.6
SNX5-201ENST00000377759 GJD2Q9UKL4 321 aa25.05■■□□□ 1.6
SNX5-201ENST00000377759 SLC6A3Q01959 620 aa25.04■■□□□ 1.6
SNX5-201ENST00000377759 TMEM62Q0P6H9 643 aa25.04■■□□□ 1.6
SNX5-201ENST00000377759 PDK2Q15119 407 aa25.04■■□□□ 1.6
SNX5-201ENST00000377759 SNCBQ16143 134 aa25.04■■□□□ 1.6
SNX5-201ENST00000377759 DUSP28Q4G0W2 176 aa25.04■■□□□ 1.6
SNX5-201ENST00000377759 BOLA3Q53S33 107 aa25.04■■□□□ 1.6
SNX5-201ENST00000377759 SYCP2LQ5T4T6 812 aa25.04■■□□□ 1.6
SNX5-201ENST00000377759 SCYL2Q6P3W7 929 aa25.04■■□□□ 1.6
SNX5-201ENST00000377759 PCDH19Q8TAB3 1148 aa25.04■■□□□ 1.6
SNX5-201ENST00000377759 FAM172AQ8WUF8 416 aa25.04■■□□□ 1.6
SNX5-201ENST00000377759 MS4A4AQ96JQ5 239 aa25.04■■□□□ 1.6
SNX5-201ENST00000377759 SNX27Q96L92 541 aa25.04■■□□□ 1.6
SNX5-201ENST00000377759 CDHR5Q9HBB8 845 aa25.04■■□□□ 1.6
SNX5-201ENST00000377759 NGRNQ9NPE2 291 aaKnown RBP25.04■■□□□ 1.6
SNX5-201ENST00000377759 DERAQ9Y315 318 aa25.04■■□□□ 1.6
SNX5-201ENST00000377759 CFAP73A6NFT4 308 aa25.03■■□□□ 1.6
SNX5-201ENST00000377759 BTBD19C9JJ37 291 aa25.03■■□□□ 1.6
SNX5-201ENST00000377759 H7C0C1 242 aa25.03■■□□□ 1.6
SNX5-201ENST00000377759 ADCY6O43306 1168 aa25.03■■□□□ 1.6
SNX5-201ENST00000377759 ATP5OP48047 213 aa25.03■■□□□ 1.6
SNX5-201ENST00000377759 KCNJ2P63252 427 aa25.03■■□□□ 1.6
SNX5-201ENST00000377759 KRT81Q14533 505 aa25.03■■□□□ 1.6
SNX5-201ENST00000377759 TEKT4Q8WW24 435 aa25.03■■□□□ 1.6
SNX5-201ENST00000377759 USP6NLQ92738 828 aa25.03■■□□□ 1.6
SNX5-201ENST00000377759 C18orf25Q96B23 403 aaPredicted RBP25.03■■□□□ 1.6
SNX5-201ENST00000377759 B3GNT5Q9BYG0 378 aa25.03■■□□□ 1.6
SNX5-201ENST00000377759 HES2Q9Y543 173 aa25.03■■□□□ 1.6
SNX5-201ENST00000377759 TEX264Q9Y6I9 313 aa25.03■■□□□ 1.6
SNX5-201ENST00000377759 CHUKO15111 745 aa25.03■■□□□ 1.6
SNX5-201ENST00000377759 STRNO43815 780 aa25.03■■□□□ 1.6
SNX5-201ENST00000377759 LVRNQ6Q4G3 990 aa25.03■■□□□ 1.6
SNX5-201ENST00000377759 RTP4Q96DX8 246 aa25.03■■□□□ 1.6
SNX5-201ENST00000377759 SNRNP25Q9BV90 132 aaKnown RBP25.03■■□□□ 1.6
SNX5-201ENST00000377759 GINS2Q9Y248 185 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms