RNA–Protein interactions for RNA: ENST00000377465.5

SEC23B-203, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-203ENST00000377465 RNF19AQ9NV58 838 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 LRRC42Q9Y546 428 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 KRT5P13647 590 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 SELPP16109 830 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 CTNNA1P35221 906 aaKnown RBP11.31□□□□□ -0.6
SEC23B-203ENST00000377465 HSPA9P38646 679 aaKnown RBP11.31□□□□□ -0.6
SEC23B-203ENST00000377465 DSC1Q08554 894 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 BFSP2Q13515 415 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 ACAP1Q15027 740 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 RPS6KA1Q15418 735 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 C2CD6Q53TS8 623 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 ZNF618Q5T7W0 954 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 CD300LGQ6UXG3 332 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 PEX26Q7Z412 305 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 VSIG1Q86XK7 387 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 ELOVL4Q9GZR5 314 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 DNAI2Q9GZS0 605 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 IQCGQ9H095 443 aaKnown RBP11.31□□□□□ -0.6
SEC23B-203ENST00000377465 STRIP2Q9ULQ0 834 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 O00370 1275 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 MGEA5O60502 916 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 FGFR4P22455 802 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 GUCY2DQ02846 1103 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 LRRC38Q5VT99 294 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 ECHDC2Q86YB7 292 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 ZDHHC17Q8IUH5 632 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 KCNV2Q8TDN2 545 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 TRIM31Q9BZY9 425 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 WNT8AQ9H1J5 351 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 CARD9Q9H257 536 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 ADAM22Q9P0K1 906 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 TUBGCP4Q9UGJ1 667 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 NME7Q9Y5B8 376 aa11.31□□□□□ -0.6
SEC23B-203ENST00000377465 HEXIM1O94992 359 aaKnown RBP11.3□□□□□ -0.6
SEC23B-203ENST00000377465 ITGA4P13612 1032 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 PEX5P50542 639 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 ZNF211Q13398 564 aaPredicted RBP11.3□□□□□ -0.6
SEC23B-203ENST00000377465 UPP1Q16831 310 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 CFAP221Q4G0U5 840 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 TMEM270Q6UE05 265 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 TRPM8Q7Z2W7 1104 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 LINC01599Q8WXQ3 324 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 MCRS1Q96EZ8 462 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 PKMYT1Q99640 499 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 CXCL16Q9H2A7 254 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 STARD7Q9NQZ5 370 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 DPYSL4O14531 572 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 TAF6P49848 677 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 HLTFQ14527 1009 aaKnown RBP eCLIP11.3□□□□□ -0.6
SEC23B-203ENST00000377465 TRADDQ15628 312 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 TMEM132AQ24JP5 1023 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 CDR2LQ86X02 465 aaPredicted RBP11.3□□□□□ -0.6
SEC23B-203ENST00000377465 MIS12Q9H081 205 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 UNC93B1Q9H1C4 597 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 MRPL47Q9HD33 250 aaKnown RBP11.3□□□□□ -0.6
SEC23B-203ENST00000377465 POLIQ9UNA4 740 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 ZNF510Q9Y2H8 683 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 A8MUI8 341 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 H0YGN5 161 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 PFKMP08237 780 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 CCL5P13501 91 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 SP100P23497 879 aaPredicted RBP11.3□□□□□ -0.6
SEC23B-203ENST00000377465 PCK1P35558 622 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 NCALDP61601 193 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 SOX4Q06945 474 aaPredicted RBP11.3□□□□□ -0.6
SEC23B-203ENST00000377465 TMEM62Q0P6H9 643 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 SOWAHAQ2M3V2 549 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 RNF220Q5VTB9 566 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 TMEM154Q6P9G4 183 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 FBXO46Q6PJ61 603 aaPredicted RBP11.3□□□□□ -0.6
SEC23B-203ENST00000377465 BNIPLQ7Z465 357 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 TFAP2BQ92481 460 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 SLC4A5Q9BY07 1137 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 SMYD3Q9H7B4 428 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 TRMT13Q9NUP7 481 aaKnown RBP11.3□□□□□ -0.6
SEC23B-203ENST00000377465 ASNSD1Q9NWL6 643 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 TRIM17Q9Y577 477 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 NFS1Q9Y697 457 aa11.3□□□□□ -0.6
SEC23B-203ENST00000377465 CARNS1A5YM72 827 aa11.29□□□□□ -0.6
SEC23B-203ENST00000377465 ZNF487B1APH4 448 aa11.29□□□□□ -0.6
SEC23B-203ENST00000377465 TLR3O15455 904 aaKnown RBP11.29□□□□□ -0.6
SEC23B-203ENST00000377465 CSDE1O75534 798 aaKnown RBP11.29□□□□□ -0.6
SEC23B-203ENST00000377465 PDHA1P08559 390 aa11.29□□□□□ -0.6
SEC23B-203ENST00000377465 TYMPP19971 482 aa11.29□□□□□ -0.6
SEC23B-203ENST00000377465 THPOP40225 353 aa11.29□□□□□ -0.6
SEC23B-203ENST00000377465 GPD2P43304 727 aa11.29□□□□□ -0.6
SEC23B-203ENST00000377465 ATP11AP98196 1134 aa11.29□□□□□ -0.6
SEC23B-203ENST00000377465 CMPK2Q5EBM0 449 aa11.29□□□□□ -0.6
SEC23B-203ENST00000377465 AGBL2Q5U5Z8 902 aa11.29□□□□□ -0.6
SEC23B-203ENST00000377465 LRRC8DQ7L1W4 858 aa11.29□□□□□ -0.6
SEC23B-203ENST00000377465 PIGWQ7Z7B1 504 aa11.29□□□□□ -0.6
SEC23B-203ENST00000377465 TMEM35BQ8NCS4 154 aa11.29□□□□□ -0.6
SEC23B-203ENST00000377465 PHACTR1Q9C0D0 580 aa11.29□□□□□ -0.6
SEC23B-203ENST00000377465 RNF39Q9H2S5 420 aa11.29□□□□□ -0.6
SEC23B-203ENST00000377465 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.29□□□□□ -0.6
SEC23B-203ENST00000377465 GALNT8Q9NY28 637 aa11.29□□□□□ -0.6
SEC23B-203ENST00000377465 CTTNBP2NLQ9P2B4 639 aa11.29□□□□□ -0.6
SEC23B-203ENST00000377465 ATXN10Q9UBB4 475 aa11.29□□□□□ -0.6
SEC23B-203ENST00000377465 PCDHA3Q9Y5H8 950 aa11.29□□□□□ -0.6
SEC23B-203ENST00000377465 VWA8A3KMH1 1905 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms