RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 UBXN6Q9BZV1 441 aa23.35■■□□□ 1.33
SRM-201ENST00000376957 SPATA6Q9NWH7 488 aaPredicted RBP23.35■■□□□ 1.33
SRM-201ENST00000376957 ANAPC1Q9H1A4 1944 aa23.35■■□□□ 1.33
SRM-201ENST00000376957 FAM92AA1XBS5 289 aa23.34■■□□□ 1.33
SRM-201ENST00000376957 LAMTOR5O43504 91 aa23.34■■□□□ 1.33
SRM-201ENST00000376957 BEST1O76090 585 aa23.34■■□□□ 1.33
SRM-201ENST00000376957 MBD3O95983 291 aa23.34■■□□□ 1.33
SRM-201ENST00000376957 OAS1P00973 400 aaKnown RBP23.34■■□□□ 1.33
SRM-201ENST00000376957 VDRP11473 427 aa23.34■■□□□ 1.33
SRM-201ENST00000376957 CD19P15391 556 aa23.34■■□□□ 1.33
SRM-201ENST00000376957 TARSP26639 723 aaKnown RBP23.34■■□□□ 1.33
SRM-201ENST00000376957 CTHP32929 405 aa23.34■■□□□ 1.33
SRM-201ENST00000376957 MTIF2P46199 727 aaKnown RBP23.34■■□□□ 1.33
SRM-201ENST00000376957 PSEN1P49768 467 aa23.34■■□□□ 1.33
SRM-201ENST00000376957 ZNF77Q15935 545 aa23.34■■□□□ 1.33
SRM-201ENST00000376957 JAKMIP2Q96AA8 810 aa23.34■■□□□ 1.33
SRM-201ENST00000376957 CLDN23Q96B33 292 aa23.34■■□□□ 1.33
SRM-201ENST00000376957 EBF3Q9H4W6 596 aa23.34■■□□□ 1.33
SRM-201ENST00000376957 THAP9Q9H5L6 903 aa23.34■■□□□ 1.33
SRM-201ENST00000376957 DLGAP2Q9P1A6 1054 aa23.34■■□□□ 1.33
SRM-201ENST00000376957 SCML2Q9UQR0 700 aa23.34■■□□□ 1.33
SRM-201ENST00000376957 MTF2Q9Y483 593 aaPredicted RBP23.34■■□□□ 1.33
SRM-201ENST00000376957 PCDHB4Q9Y5E5 795 aa23.34■■□□□ 1.33
SRM-201ENST00000376957 NFATC1O95644 943 aa23.33■■□□□ 1.33
SRM-201ENST00000376957 OLFM2O95897 454 aa23.33■■□□□ 1.33
SRM-201ENST00000376957 PAEPP09466 180 aa23.33■■□□□ 1.33
SRM-201ENST00000376957 GCNT1Q02742 428 aa23.33■■□□□ 1.33
SRM-201ENST00000376957 USP4Q13107 963 aa23.33■■□□□ 1.33
SRM-201ENST00000376957 DGKKQ5KSL6 1271 aa23.33■■□□□ 1.33
SRM-201ENST00000376957 TMEM270Q6UE05 265 aa23.33■■□□□ 1.33
SRM-201ENST00000376957 ANKRD52Q8NB46 1076 aa23.33■■□□□ 1.33
SRM-201ENST00000376957 TTC8Q8TAM2 541 aa23.33■■□□□ 1.33
SRM-201ENST00000376957 CDK5RAP1Q96SZ6 601 aaKnown RBP23.33■■□□□ 1.33
SRM-201ENST00000376957 GMIPQ9P107 970 aa23.33■■□□□ 1.33
SRM-201ENST00000376957 TBC1D14Q9P2M4 693 aa23.33■■□□□ 1.33
SRM-201ENST00000376957 CPQQ9Y646 472 aa23.33■■□□□ 1.33
SRM-201ENST00000376957 LEFTY2O00292 366 aa23.32■■□□□ 1.32
SRM-201ENST00000376957 BCAT1P54687 386 aa23.32■■□□□ 1.32
SRM-201ENST00000376957 TNK2Q07912 1038 aa23.32■■□□□ 1.32
SRM-201ENST00000376957 STILQ15468 1287 aa23.32■■□□□ 1.32
SRM-201ENST00000376957 ZC3H14Q6PJT7 736 aaKnown RBP23.32■■□□□ 1.32
SRM-201ENST00000376957 ENOSF1Q7L5Y1 443 aa23.32■■□□□ 1.32
SRM-201ENST00000376957 ARHGAP18Q8N392 663 aa23.32■■□□□ 1.32
SRM-201ENST00000376957 RNF38Q9H0F5 515 aa23.32■■□□□ 1.32
SRM-201ENST00000376957 LMAN1LQ9HAT1 526 aa23.32■■□□□ 1.32
SRM-201ENST00000376957 SH3BP1Q9Y3L3 701 aa23.32■■□□□ 1.32
SRM-201ENST00000376957 RALAP11233 206 aa23.31■■□□□ 1.32
SRM-201ENST00000376957 ATP5C1P36542 298 aaKnown RBP23.31■■□□□ 1.32
SRM-201ENST00000376957 MFAP3P55082 362 aa23.31■■□□□ 1.32
SRM-201ENST00000376957 GRSF1Q12849 480 aaKnown RBP eCLIP23.31■■□□□ 1.32
SRM-201ENST00000376957 DPCR1Q3MIW9 517 aa23.31■■□□□ 1.32
SRM-201ENST00000376957 SASS6Q6UVJ0 657 aa23.31■■□□□ 1.32
SRM-201ENST00000376957 GBP6Q6ZN66 633 aa23.31■■□□□ 1.32
SRM-201ENST00000376957 ECT2Q9H8V3 914 aa23.31■■□□□ 1.32
SRM-201ENST00000376957 SMPD4Q9NXE4 827 aa23.31■■□□□ 1.32
SRM-201ENST00000376957 COCHO43405 550 aa23.3■■□□□ 1.32
SRM-201ENST00000376957 ZDHHC11BP0C7U3 371 aa23.3■■□□□ 1.32
SRM-201ENST00000376957 SOX9P48436 509 aa23.3■■□□□ 1.32
SRM-201ENST00000376957 KIF11P52732 1056 aa23.3■■□□□ 1.32
SRM-201ENST00000376957 BST2Q10589 180 aaKnown RBP23.3■■□□□ 1.32
SRM-201ENST00000376957 GOLGA7BQ2TAP0 167 aa23.3■■□□□ 1.32
SRM-201ENST00000376957 TRIM68Q6AZZ1 485 aa23.3■■□□□ 1.32
SRM-201ENST00000376957 RRAGAQ7L523 313 aa23.3■■□□□ 1.32
SRM-201ENST00000376957 SYNPOQ8N3V7 929 aa23.3■■□□□ 1.32
SRM-201ENST00000376957 CCDC26Q8TAB7 109 aa23.3■■□□□ 1.32
SRM-201ENST00000376957 OTUB2Q96DC9 234 aa23.3■■□□□ 1.32
SRM-201ENST00000376957 INTS2Q9H0H0 1204 aaKnown RBP23.3■■□□□ 1.32
SRM-201ENST00000376957 LRRC4Q9HBW1 653 aa23.3■■□□□ 1.32
SRM-201ENST00000376957 FBXO4Q9UKT5 387 aa23.3■■□□□ 1.32
SRM-201ENST00000376957 MUC6Q6W4X9 2439 aa23.3■■□□□ 1.32
SRM-201ENST00000376957 HELZP42694 1942 aaKnown RBP23.29■■□□□ 1.32
SRM-201ENST00000376957 E2F8A0AVK6 867 aa23.29■■□□□ 1.32
SRM-201ENST00000376957 GTPBP10A4D1E9 387 aaKnown RBP23.29■■□□□ 1.32
SRM-201ENST00000376957 HHLA1C9JL84 531 aa23.29■■□□□ 1.32
SRM-201ENST00000376957 TLR5O60602 858 aa23.29■■□□□ 1.32
SRM-201ENST00000376957 CCDC186Q7Z3E2 898 aa23.29■■□□□ 1.32
SRM-201ENST00000376957 LMO3Q8TAP4 145 aa23.29■■□□□ 1.32
SRM-201ENST00000376957 HPS4Q9NQG7 708 aa23.29■■□□□ 1.32
SRM-201ENST00000376957 CFAP97Q9P2B7 532 aa23.29■■□□□ 1.32
SRM-201ENST00000376957 NAGPAQ9UK23 515 aa23.29■■□□□ 1.32
SRM-201ENST00000376957 TSPAN16Q9UKR8 245 aa23.29■■□□□ 1.32
SRM-201ENST00000376957 WNT6Q9Y6F9 365 aa23.29■■□□□ 1.32
SRM-201ENST00000376957 COL4A2P08572 1712 aa23.28■■□□□ 1.32
SRM-201ENST00000376957 XPO1O14980 1071 aaKnown RBP23.28■■□□□ 1.32
SRM-201ENST00000376957 TPM2P07951 284 aa23.28■■□□□ 1.32
SRM-201ENST00000376957 SETSIPP0DME0 302 aa23.28■■□□□ 1.32
SRM-201ENST00000376957 PON2Q15165 354 aa23.28■■□□□ 1.32
SRM-201ENST00000376957 MAN2A1Q16706 1144 aa23.28■■□□□ 1.32
SRM-201ENST00000376957 CHRDQ9H2X0 955 aa23.28■■□□□ 1.32
SRM-201ENST00000376957 CCSER2Q9H7U1 834 aa23.28■■□□□ 1.32
SRM-201ENST00000376957 CYLDQ9NQC7 956 aa23.28■■□□□ 1.32
SRM-201ENST00000376957 LSM7Q9UK45 103 aaKnown RBP23.28■■□□□ 1.32
SRM-201ENST00000376957 PATJQ8NI35 1801 aa23.27■■□□□ 1.32
SRM-201ENST00000376957 CYP26A1O43174 497 aa23.27■■□□□ 1.32
SRM-201ENST00000376957 MED7O43513 233 aa23.27■■□□□ 1.32
SRM-201ENST00000376957 CHRNB1P11230 501 aa23.27■■□□□ 1.32
SRM-201ENST00000376957 ARSAP15289 507 aa23.27■■□□□ 1.32
SRM-201ENST00000376957 CCR3P51677 355 aa23.27■■□□□ 1.32
SRM-201ENST00000376957 EXOC3L4Q17RC7 722 aa23.27■■□□□ 1.32
SRM-201ENST00000376957 EML3Q32P44 896 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms