RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 DCDC2BA2VCK2 349 aa22.31■■□□□ 1.16
VSX1-201ENST00000376707 IKBKBO14920 756 aa22.31■■□□□ 1.16
VSX1-201ENST00000376707 RHOBTB3O94955 611 aa22.31■■□□□ 1.16
VSX1-201ENST00000376707 APBB3O95704 486 aa22.31■■□□□ 1.16
VSX1-201ENST00000376707 PRR29P0C7W0 189 aa22.31■■□□□ 1.16
VSX1-201ENST00000376707 HECTD3Q5T447 861 aa22.31■■□□□ 1.16
VSX1-201ENST00000376707 ADGRG2Q8IZP9 1017 aa22.31■■□□□ 1.16
VSX1-201ENST00000376707 FUKQ8N0W3 1084 aa22.31■■□□□ 1.16
VSX1-201ENST00000376707 SCAMP5Q8TAC9 235 aa22.31■■□□□ 1.16
VSX1-201ENST00000376707 ARRDC1-AS1Q9H2J1 176 aa22.31■■□□□ 1.16
VSX1-201ENST00000376707 GOLPH3LQ9H4A5 285 aa22.31■■□□□ 1.16
VSX1-201ENST00000376707 HELZP42694 1942 aaKnown RBP22.3■■□□□ 1.16
VSX1-201ENST00000376707 TNFRSF10BO14763 440 aa22.3■■□□□ 1.16
VSX1-201ENST00000376707 COCHO43405 550 aa22.3■■□□□ 1.16
VSX1-201ENST00000376707 ASS1P00966 412 aaKnown RBP22.3■■□□□ 1.16
VSX1-201ENST00000376707 CCDC130P13994 396 aa22.3■■□□□ 1.16
VSX1-201ENST00000376707 TRIM21P19474 475 aaKnown RBP22.3■■□□□ 1.16
VSX1-201ENST00000376707 NR2F2P24468 414 aa22.3■■□□□ 1.16
VSX1-201ENST00000376707 VAMP7P51809 220 aa22.3■■□□□ 1.16
VSX1-201ENST00000376707 NDST1P52848 882 aa22.3■■□□□ 1.16
VSX1-201ENST00000376707 SEC13P55735 322 aa22.3■■□□□ 1.16
VSX1-201ENST00000376707 ORC1Q13415 861 aa22.3■■□□□ 1.16
VSX1-201ENST00000376707 BECN1Q14457 450 aa22.3■■□□□ 1.16
VSX1-201ENST00000376707 DHCR24Q15392 516 aa22.3■■□□□ 1.16
VSX1-201ENST00000376707 C2orf27AQ580R0 203 aa22.3■■□□□ 1.16
VSX1-201ENST00000376707 SLC2A14Q8TDB8 520 aa22.3■■□□□ 1.16
VSX1-201ENST00000376707 IMPG2Q9BZV3 1241 aa22.3■■□□□ 1.16
VSX1-201ENST00000376707 COMMD8Q9NX08 183 aa22.3■■□□□ 1.16
VSX1-201ENST00000376707 TBC1D14Q9P2M4 693 aa22.3■■□□□ 1.16
VSX1-201ENST00000376707 K7EQS6 105 aa22.29■■□□□ 1.16
VSX1-201ENST00000376707 SLC30A4O14863 429 aa22.29■■□□□ 1.16
VSX1-201ENST00000376707 MAPK13O15264 365 aa22.29■■□□□ 1.16
VSX1-201ENST00000376707 ZNF202O95125 648 aa22.29■■□□□ 1.16
VSX1-201ENST00000376707 EPN2O95208 641 aa22.29■■□□□ 1.16
VSX1-201ENST00000376707 ADH1CP00326 375 aa22.29■■□□□ 1.16
VSX1-201ENST00000376707 HLA-DRAP01903 254 aa22.29■■□□□ 1.16
VSX1-201ENST00000376707 ASPAP45381 313 aa22.29■■□□□ 1.16
VSX1-201ENST00000376707 GAB4Q2WGN9 574 aa22.29■■□□□ 1.16
VSX1-201ENST00000376707 SPOPLQ6IQ16 392 aa22.29■■□□□ 1.16
VSX1-201ENST00000376707 UNC93AQ86WB7 457 aa22.29■■□□□ 1.16
VSX1-201ENST00000376707 CRYBG2Q8N1P7 616 aa22.29■■□□□ 1.16
VSX1-201ENST00000376707 TSTD1Q8NFU3 115 aa22.29■■□□□ 1.16
VSX1-201ENST00000376707 USP33Q8TEY7 942 aa22.29■■□□□ 1.16
VSX1-201ENST00000376707 NACA2Q9H009 215 aa22.29■■□□□ 1.16
VSX1-201ENST00000376707 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.29■■□□□ 1.16
VSX1-201ENST00000376707 IL37Q9NZH6 218 aa22.29■■□□□ 1.16
VSX1-201ENST00000376707 GMIPQ9P107 970 aa22.29■■□□□ 1.16
VSX1-201ENST00000376707 HMGXB4Q9UGU5 601 aa22.29■■□□□ 1.16
VSX1-201ENST00000376707 MAPK8IP1Q9UQF2 711 aa22.29■■□□□ 1.16
VSX1-201ENST00000376707 E2F8A0AVK6 867 aa22.28■■□□□ 1.16
VSX1-201ENST00000376707 KRT13P13646 458 aa22.28■■□□□ 1.16
VSX1-201ENST00000376707 DGKEP52429 567 aa22.28■■□□□ 1.16
VSX1-201ENST00000376707 NFIL3Q16649 462 aa22.28■■□□□ 1.16
VSX1-201ENST00000376707 C1orf220Q5T0J3 134 aa22.28■■□□□ 1.16
VSX1-201ENST00000376707 SNX30Q5VWJ9 437 aa22.28■■□□□ 1.16
VSX1-201ENST00000376707 RHBDF2Q6PJF5 856 aa22.28■■□□□ 1.16
VSX1-201ENST00000376707 INTS8Q75QN2 995 aaKnown RBP22.28■■□□□ 1.16
VSX1-201ENST00000376707 C12orf50Q8NA57 414 aaPredicted RBP22.28■■□□□ 1.16
VSX1-201ENST00000376707 ZC3H10Q96K80 434 aaKnown RBP22.28■■□□□ 1.16
VSX1-201ENST00000376707 SMOQ99835 787 aa22.28■■□□□ 1.16
VSX1-201ENST00000376707 CCSER2Q9H7U1 834 aa22.28■■□□□ 1.16
VSX1-201ENST00000376707 GDPD2Q9HCC8 539 aa22.28■■□□□ 1.16
VSX1-201ENST00000376707 FAM49BQ9NUQ9 324 aa22.28■■□□□ 1.16
VSX1-201ENST00000376707 EBF1Q9UH73 591 aa22.28■■□□□ 1.16
VSX1-201ENST00000376707 SH3BP1Q9Y3L3 701 aa22.28■■□□□ 1.16
VSX1-201ENST00000376707 GDF9O60383 454 aa22.27■■□□□ 1.16
VSX1-201ENST00000376707 ADH5P11766 374 aa22.27■■□□□ 1.16
VSX1-201ENST00000376707 RPL13P26373 211 aaKnown RBP22.27■■□□□ 1.16
VSX1-201ENST00000376707 EIF2DP41214 584 aaKnown RBP22.27■■□□□ 1.16
VSX1-201ENST00000376707 GCLMP48507 274 aa22.27■■□□□ 1.16
VSX1-201ENST00000376707 TUBP50607 506 aa22.27■■□□□ 1.16
VSX1-201ENST00000376707 MAP3K7CLP57077 242 aa22.27■■□□□ 1.16
VSX1-201ENST00000376707 ELF2Q15723 593 aa22.27■■□□□ 1.16
VSX1-201ENST00000376707 CCDC6Q16204 474 aa22.27■■□□□ 1.16
VSX1-201ENST00000376707 AASDHQ4L235 1098 aaPredicted RBP22.27■■□□□ 1.16
VSX1-201ENST00000376707 FAM186BQ8IYM0 893 aa22.27■■□□□ 1.16
VSX1-201ENST00000376707 C12orf29Q8N999 325 aa22.27■■□□□ 1.16
VSX1-201ENST00000376707 ZMIZ2Q8NF64 920 aa22.27■■□□□ 1.16
VSX1-201ENST00000376707 PNKPQ96T60 521 aa22.27■■□□□ 1.16
VSX1-201ENST00000376707 FBXO44Q9H4M3 255 aa22.27■■□□□ 1.16
VSX1-201ENST00000376707 FAM92AA1XBS5 289 aa22.26■■□□□ 1.15
VSX1-201ENST00000376707 BEST1O76090 585 aa22.26■■□□□ 1.15
VSX1-201ENST00000376707 APODP05090 189 aa22.26■■□□□ 1.15
VSX1-201ENST00000376707 FAM200BP0CF97 657 aa22.26■■□□□ 1.15
VSX1-201ENST00000376707 TRIM49P0CI25 452 aa22.26■■□□□ 1.15
VSX1-201ENST00000376707 TRIM49CP0CI26 452 aa22.26■■□□□ 1.15
VSX1-201ENST00000376707 ADORA2BP29275 332 aa22.26■■□□□ 1.15
VSX1-201ENST00000376707 SLC6A11P48066 632 aa22.26■■□□□ 1.15
VSX1-201ENST00000376707 SF3A2Q15428 464 aaKnown RBP22.26■■□□□ 1.15
VSX1-201ENST00000376707 PLK5Q496M5 336 aa22.26■■□□□ 1.15
VSX1-201ENST00000376707 GUF1Q8N442 669 aaKnown RBP22.26■■□□□ 1.15
VSX1-201ENST00000376707 CCDC33Q8N5R6 958 aa22.26■■□□□ 1.15
VSX1-201ENST00000376707 OTUB2Q96DC9 234 aa22.26■■□□□ 1.15
VSX1-201ENST00000376707 ZFRQ96KR1 1074 aaKnown RBP22.26■■□□□ 1.15
VSX1-201ENST00000376707 MMRN2Q9H8L6 949 aa22.26■■□□□ 1.15
VSX1-201ENST00000376707 CSNK1G1Q9HCP0 422 aa22.26■■□□□ 1.15
VSX1-201ENST00000376707 MMP17Q9ULZ9 603 aa22.26■■□□□ 1.15
VSX1-201ENST00000376707 PCDHGA5Q9Y5G8 931 aa22.26■■□□□ 1.15
VSX1-201ENST00000376707 ATG2BQ96BY7 2078 aa22.26■■□□□ 1.15
VSX1-201ENST00000376707 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms