RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 NACA2Q9H009 215 aa19.62■□□□□ 0.73
HDAC6-202ENST00000376610 GZF1Q9H116 711 aaPredicted RBP19.62■□□□□ 0.73
HDAC6-202ENST00000376610 SMOC1Q9H4F8 434 aa19.62■□□□□ 0.73
HDAC6-202ENST00000376610 SMYD3Q9H7B4 428 aa19.62■□□□□ 0.73
HDAC6-202ENST00000376610 SH3BP1Q9Y3L3 701 aa19.62■□□□□ 0.73
HDAC6-202ENST00000376610 MYH10P35580 1976 aa19.62■□□□□ 0.73
HDAC6-202ENST00000376610 MAP1BP46821 2468 aaKnown RBP19.62■□□□□ 0.73
HDAC6-202ENST00000376610 MYOFQ9NZM1 2061 aa19.61■□□□□ 0.73
HDAC6-202ENST00000376610 E2F8A0AVK6 867 aa19.61■□□□□ 0.73
HDAC6-202ENST00000376610 LRRIQ3A6PVS8 624 aaPredicted RBP19.61■□□□□ 0.73
HDAC6-202ENST00000376610 SCAMP3O14828 347 aaKnown RBP19.61■□□□□ 0.73
HDAC6-202ENST00000376610 CAVIN2O95810 425 aa19.61■□□□□ 0.73
HDAC6-202ENST00000376610 SLFN14P0C7P3 912 aa19.61■□□□□ 0.73
HDAC6-202ENST00000376610 ADH5P11766 374 aa19.61■□□□□ 0.73
HDAC6-202ENST00000376610 CDH8P55286 799 aa19.61■□□□□ 0.73
HDAC6-202ENST00000376610 HSF5Q4G112 596 aaPredicted RBP19.61■□□□□ 0.73
HDAC6-202ENST00000376610 PREPLQ4J6C6 727 aaPredicted RBP19.61■□□□□ 0.73
HDAC6-202ENST00000376610 BTBD8Q5XKL5 378 aa19.61■□□□□ 0.73
HDAC6-202ENST00000376610 CCDC33Q8N5R6 958 aa19.61■□□□□ 0.73
HDAC6-202ENST00000376610 PARD3BQ8TEW8 1205 aa19.61■□□□□ 0.73
HDAC6-202ENST00000376610 CNOT6LQ96LI5 555 aaKnown RBP19.61■□□□□ 0.73
HDAC6-202ENST00000376610 TMEM30AQ9NV96 361 aa19.61■□□□□ 0.73
HDAC6-202ENST00000376610 COMMD8Q9NX08 183 aa19.61■□□□□ 0.73
HDAC6-202ENST00000376610 ABCA7Q8IZY2 2146 aa19.61■□□□□ 0.73
HDAC6-202ENST00000376610 NUP205Q92621 2012 aa19.61■□□□□ 0.73
HDAC6-202ENST00000376610 THADAQ6YHU6 1953 aa19.61■□□□□ 0.73
HDAC6-202ENST00000376610 BCLAF3A2AJT9 711 aaKnown RBP19.6■□□□□ 0.73
HDAC6-202ENST00000376610 KAT7O95251 611 aa19.6■□□□□ 0.73
HDAC6-202ENST00000376610 GRIA2P42262 883 aa19.6■□□□□ 0.73
HDAC6-202ENST00000376610 SLC5A3P53794 718 aa19.6■□□□□ 0.73
HDAC6-202ENST00000376610 CRY1Q16526 586 aa19.6■□□□□ 0.73
HDAC6-202ENST00000376610 SGSM1Q2NKQ1 1148 aa19.6■□□□□ 0.73
HDAC6-202ENST00000376610 RHBDF2Q6PJF5 856 aa19.6■□□□□ 0.73
HDAC6-202ENST00000376610 NUDT18Q6ZVK8 323 aa19.6■□□□□ 0.73
HDAC6-202ENST00000376610 GRAMD1CQ8IYS0 662 aa19.6■□□□□ 0.73
HDAC6-202ENST00000376610 CHAMP1Q96JM3 812 aa19.6■□□□□ 0.73
HDAC6-202ENST00000376610 KCNK16Q96T55 309 aa19.6■□□□□ 0.73
HDAC6-202ENST00000376610 EDEM2Q9BV94 578 aa19.6■□□□□ 0.73
HDAC6-202ENST00000376610 POLMQ9NP87 494 aaPredicted RBP19.6■□□□□ 0.73
HDAC6-202ENST00000376610 ARHGEF4Q9NR80 690 aa19.6■□□□□ 0.73
HDAC6-202ENST00000376610 KRT82Q9NSB4 513 aa19.6■□□□□ 0.73
HDAC6-202ENST00000376610 RXFP3Q9NSD7 469 aa19.6■□□□□ 0.73
HDAC6-202ENST00000376610 CHORDC1Q9UHD1 332 aaPredicted RBP19.6■□□□□ 0.73
HDAC6-202ENST00000376610 SERTAD1Q9UHV2 236 aa19.6■□□□□ 0.73
HDAC6-202ENST00000376610 INVSQ9Y283 1065 aa19.6■□□□□ 0.73
HDAC6-202ENST00000376610 COCHO43405 550 aa19.59■□□□□ 0.73
HDAC6-202ENST00000376610 AP1G2O75843 785 aa19.59■□□□□ 0.73
HDAC6-202ENST00000376610 RPN1P04843 607 aaKnown RBP19.59■□□□□ 0.73
HDAC6-202ENST00000376610 TUBP50607 506 aa19.59■□□□□ 0.73
HDAC6-202ENST00000376610 CLDN10P78369 228 aa19.59■□□□□ 0.73
HDAC6-202ENST00000376610 GAD2Q05329 585 aa19.59■□□□□ 0.73
HDAC6-202ENST00000376610 KDSRQ06136 332 aa19.59■□□□□ 0.73
HDAC6-202ENST00000376610 GAB4Q2WGN9 574 aa19.59■□□□□ 0.73
HDAC6-202ENST00000376610 EOGTQ5NDL2 527 aa19.59■□□□□ 0.73
HDAC6-202ENST00000376610 PMS2CLQ68D20 193 aa19.59■□□□□ 0.73
HDAC6-202ENST00000376610 RASSF3Q86WH2 238 aa19.59■□□□□ 0.73
HDAC6-202ENST00000376610 SLC9A9Q8IVB4 645 aa19.59■□□□□ 0.73
HDAC6-202ENST00000376610 ALLCQ8N6M5 410 aa19.59■□□□□ 0.73
HDAC6-202ENST00000376610 PLEKHO2Q8TD55 490 aa19.59■□□□□ 0.73
HDAC6-202ENST00000376610 TAF4BQ92750 862 aa19.59■□□□□ 0.73
HDAC6-202ENST00000376610 SPACA7Q96KW9 195 aa19.59■□□□□ 0.73
HDAC6-202ENST00000376610 BCCIPQ9P287 314 aaKnown RBP eCLIP19.59■□□□□ 0.73
HDAC6-202ENST00000376610 CIZ1Q9ULV3 898 aaPredicted RBP19.59■□□□□ 0.73
HDAC6-202ENST00000376610 FRMD4BQ9Y2L6 1034 aa19.59■□□□□ 0.73
HDAC6-202ENST00000376610 PDXKO00764 312 aa19.58■□□□□ 0.72
HDAC6-202ENST00000376610 KIF20AO95235 890 aa19.58■□□□□ 0.72
HDAC6-202ENST00000376610 KLF8O95600 359 aaPredicted RBP19.58■□□□□ 0.72
HDAC6-202ENST00000376610 C4BPAP04003 597 aaKnown RBP19.58■□□□□ 0.72
HDAC6-202ENST00000376610 TIE1P35590 1138 aa19.58■□□□□ 0.72
HDAC6-202ENST00000376610 TNFRSF4P43489 277 aa19.58■□□□□ 0.72
HDAC6-202ENST00000376610 SLC6A11P48066 632 aa19.58■□□□□ 0.72
HDAC6-202ENST00000376610 STK4Q13043 487 aa19.58■□□□□ 0.72
HDAC6-202ENST00000376610 LY6G5CQ5SRR4 150 aa19.58■□□□□ 0.72
HDAC6-202ENST00000376610 SNX30Q5VWJ9 437 aa19.58■□□□□ 0.72
HDAC6-202ENST00000376610 TCEAL6Q6IPX3 200 aa19.58■□□□□ 0.72
HDAC6-202ENST00000376610 CYP2U1Q7Z449 544 aa19.58■□□□□ 0.72
HDAC6-202ENST00000376610 ACOT1Q86TX2 421 aa19.58■□□□□ 0.72
HDAC6-202ENST00000376610 TXNDC5Q8NBS9 432 aaKnown RBP19.58■□□□□ 0.72
HDAC6-202ENST00000376610 MDGA1Q8NFP4 955 aa19.58■□□□□ 0.72
HDAC6-202ENST00000376610 SCAMP5Q8TAC9 235 aa19.58■□□□□ 0.72
HDAC6-202ENST00000376610 WHAMMQ8TF30 809 aa19.58■□□□□ 0.72
HDAC6-202ENST00000376610 TCEAL3Q969E4 200 aa19.58■□□□□ 0.72
HDAC6-202ENST00000376610 CCDC47Q96A33 483 aaKnown RBP19.58■□□□□ 0.72
HDAC6-202ENST00000376610 PAGE5Q96GU1 130 aa19.58■□□□□ 0.72
HDAC6-202ENST00000376610 FBXO44Q9H4M3 255 aa19.58■□□□□ 0.72
HDAC6-202ENST00000376610 USP25Q9UHP3 1055 aa19.58■□□□□ 0.72
HDAC6-202ENST00000376610 ANGPTL2Q9UKU9 493 aa19.58■□□□□ 0.72
HDAC6-202ENST00000376610 MYO18AQ92614 2054 aaKnown RBP19.57■□□□□ 0.72
HDAC6-202ENST00000376610 TM4SF5O14894 197 aa19.57■□□□□ 0.72
HDAC6-202ENST00000376610 KHNYNO15037 678 aaKnown RBP19.57■□□□□ 0.72
HDAC6-202ENST00000376610 MAP3K13O43283 966 aa19.57■□□□□ 0.72
HDAC6-202ENST00000376610 NR3C1P04150 777 aa19.57■□□□□ 0.72
HDAC6-202ENST00000376610 MYL1P05976 194 aa19.57■□□□□ 0.72
HDAC6-202ENST00000376610 DHPSP49366 369 aaPredicted RBP19.57■□□□□ 0.72
HDAC6-202ENST00000376610 DNM1Q05193 864 aaKnown RBP19.57■□□□□ 0.72
HDAC6-202ENST00000376610 BYSLQ13895 437 aaKnown RBP19.57■□□□□ 0.72
HDAC6-202ENST00000376610 KMT5BQ4FZB7 885 aa19.57■□□□□ 0.72
HDAC6-202ENST00000376610 DAB2IPQ5VWQ8 1189 aa19.57■□□□□ 0.72
HDAC6-202ENST00000376610 CEP135Q66GS9 1140 aa19.57■□□□□ 0.72
HDAC6-202ENST00000376610 TRMT11Q7Z4G4 463 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms