RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 NFICP08651 508 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 BST1Q10588 318 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 TRIP10Q15642 601 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 RAB6CQ53S08 254 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 RNF43Q68DV7 783 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 IZUMO2Q6UXV1 221 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 MPHOSPH6Q99547 160 aaKnown RBP14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 RAB6CQ9H0N0 254 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 DCLRE1BQ9H816 532 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 HES2Q9Y543 173 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 WASF2Q9Y6W5 498 aa14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 MYO18AQ92614 2054 aaKnown RBP14.96□□□□□ -0.01
TNFRSF1B-201ENST00000376259 A0A0B4J269 797 aa14.96□□□□□ -0.02
TNFRSF1B-201ENST00000376259 GLRBP48167 497 aa14.96□□□□□ -0.02
TNFRSF1B-201ENST00000376259 EMC10Q5UCC4 262 aa14.96□□□□□ -0.02
TNFRSF1B-201ENST00000376259 RNF220Q5VTB9 566 aa14.96□□□□□ -0.02
TNFRSF1B-201ENST00000376259 STYK1Q6J9G0 422 aa14.96□□□□□ -0.02
TNFRSF1B-201ENST00000376259 SAMD3Q8N6K7 520 aa14.96□□□□□ -0.02
TNFRSF1B-201ENST00000376259 UCMAQ8WVF2 138 aa14.96□□□□□ -0.02
TNFRSF1B-201ENST00000376259 EXT2Q93063 718 aa14.96□□□□□ -0.02
TNFRSF1B-201ENST00000376259 C17orf75Q9HAS0 396 aa14.96□□□□□ -0.02
TNFRSF1B-201ENST00000376259 BATF3Q9NR55 127 aa14.96□□□□□ -0.02
TNFRSF1B-201ENST00000376259 DNAJC16Q9Y2G8 782 aa14.96□□□□□ -0.02
TNFRSF1B-201ENST00000376259 STARD13Q9Y3M8 1113 aa14.96□□□□□ -0.02
TNFRSF1B-201ENST00000376259 E9PBE3 544 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 KCNK1O00180 336 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 KLHL41O60662 606 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ZC3H11AO75152 810 aaKnown RBP eCLIP14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 GPD1P21695 349 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 GMPRP36959 345 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 SP2Q02086 613 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 PTPN11Q06124 597 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 GOLGA7BQ2TAP0 167 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 UNC5BQ8IZJ1 945 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 A0A087WZ62 844 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 RGL2O15211 777 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 MT-CO1P00395 513 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 VHLP40337 213 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ASPHQ12797 758 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 GRM1Q13255 1194 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 FDXACB1Q9BRP7 624 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ARHGEF3Q9NR81 526 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 HMGXB4Q9UGU5 601 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 NENFQ9UMX5 172 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 DPPA5A6NC42 116 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ALOX15BO15296 676 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 PLEKHA7Q6IQ23 1121 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 CRELD2Q6UXH1 353 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 GALNT4Q8N4A0 578 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ADAM32Q8TC27 787 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 SREK1Q8WXA9 508 aaKnown RBP14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 OXNAD1Q96HP4 312 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 SERAC1Q96JX3 654 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 LPIN3Q9BQK8 851 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 BTBD10Q9BSF8 475 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 WWP1Q9H0M0 922 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ELP3Q9H9T3 547 aa14.95□□□□□ -0.02
TNFRSF1B-201ENST00000376259 SLC4A1P02730 911 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ATP6V1B1P15313 513 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 CDKN2BP42772 138 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 NDST1P52848 882 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 HADHBP55084 474 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 WLSQ5T9L3 541 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 SLC30A9Q6PML9 568 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 CATSPER4Q7RTX7 472 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 C12orf56Q8IXR9 622 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 TMEM109Q9BVC6 243 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 SIK2Q9H0K1 926 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 RSAD1Q9HA92 442 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 SLC24A2Q9UI40 661 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ANGPTL2Q9UKU9 493 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ADCY3O60266 1144 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 GRIN3BO60391 1043 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ETS2P15036 469 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 UBA1P22314 1058 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ATXN1P54253 815 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 SNRPFP62306 86 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 RBBP5Q15291 538 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 HSDL1Q3SXM5 330 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 DALRD3Q5D0E6 543 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 C12orf50Q8NA57 414 aaPredicted RBP14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 FGD4Q96M96 766 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 PORCNQ9H237 461 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 PIM2Q9P1W9 311 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 TSPAN16Q9UKR8 245 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 GRID1Q9ULK0 1009 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 CLEC11AQ9Y240 323 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 MTO1Q9Y2Z2 717 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 LRP5O75197 1615 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 GOLGA4Q13439 2230 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 MICAL2O94851 1124 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ZBTB48P10074 688 aaPredicted RBP14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 MLH1P40692 756 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 SLC8A3P57103 927 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 HIC1Q14526 733 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 RNASEH2BQ5TBB1 312 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 CGB2Q6NT52 195 aa14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 NDRG1Q92597 394 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1B-201ENST00000376259 COQ4Q9Y3A0 265 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms