RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 AAASQ9NRG9 546 aa18.84■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ZNF148Q9UQR1 794 aa18.84■□□□□ 0.61
HLA-DQB1-201ENST00000374943 CENPFP49454 3210 aa18.83■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ZNF487B1APH4 448 aa18.83■□□□□ 0.61
HLA-DQB1-201ENST00000374943 APOC4-APOC2K7ER74 178 aa18.83■□□□□ 0.61
HLA-DQB1-201ENST00000374943 NDC80O14777 642 aa18.83■□□□□ 0.61
HLA-DQB1-201ENST00000374943 MDM4O15151 490 aa18.83■□□□□ 0.61
HLA-DQB1-201ENST00000374943 APOC2P02655 101 aa18.83■□□□□ 0.61
HLA-DQB1-201ENST00000374943 CD48P09326 243 aa18.83■□□□□ 0.61
HLA-DQB1-201ENST00000374943 NPR3P17342 541 aa18.83■□□□□ 0.61
HLA-DQB1-201ENST00000374943 SLC8A3P57103 927 aa18.83■□□□□ 0.61
HLA-DQB1-201ENST00000374943 GRIK3Q13003 919 aa18.83■□□□□ 0.61
HLA-DQB1-201ENST00000374943 AGBL2Q5U5Z8 902 aa18.83■□□□□ 0.61
HLA-DQB1-201ENST00000374943 SLC43A3Q8NBI5 491 aa18.83■□□□□ 0.61
HLA-DQB1-201ENST00000374943 OR2W6PQ8NHA6 318 aa18.83■□□□□ 0.61
HLA-DQB1-201ENST00000374943 FAM172AQ8WUF8 416 aa18.83■□□□□ 0.61
HLA-DQB1-201ENST00000374943 KCTD13Q8WZ19 329 aa18.83■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ABHD8Q96I13 439 aa18.83■□□□□ 0.61
HLA-DQB1-201ENST00000374943 PCDH9Q9HC56 1237 aa18.83■□□□□ 0.61
HLA-DQB1-201ENST00000374943 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.83■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ANAPC5Q9UJX4 755 aa18.83■□□□□ 0.61
HLA-DQB1-201ENST00000374943 NLRC5Q86WI3 1866 aa18.83■□□□□ 0.6
HLA-DQB1-201ENST00000374943 MAP2K2P36507 400 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 SKOR1P84550 965 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 OTUD4Q01804 1114 aaKnown RBP18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 DPYSL3Q14195 570 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 CDO1Q16878 200 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 EFHC1Q5JVL4 640 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 IZUMO3Q5VZ72 239 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 HIBCHQ6NVY1 386 aaPredicted RBP18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 PAQR9Q6ZVX9 377 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 RFX6Q8HWS3 928 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 C3orf58Q8NDZ4 430 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 ACTL9Q8TC94 416 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 ADAM2Q99965 735 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 TMEM109Q9BVC6 243 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 DDX43Q9NXZ2 648 aaKnown RBP18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 DNALI1O14645 258 aaPredicted RBP18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 RIPK2O43353 540 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 ATP2C2O75185 946 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 LCP1P13796 627 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 IGFBP6P24592 240 aaPredicted RBP18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 LMAN1P49257 510 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 CDH6P55285 790 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 HDAC4P56524 1084 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 ATP11AP98196 1134 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 TFDP2Q14188 446 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 RAB6CQ53S08 254 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 KIAA0319Q5VV43 1072 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 LHX8Q68G74 356 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 TRAF7Q6Q0C0 670 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 DSTYKQ6XUX3 929 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 CEP128Q6ZU80 1094 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 CROCCP2Q86T23 111 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 ZNF598Q86UK7 904 aaKnown RBP18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 PIGZQ86VD9 579 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 HOOK3Q86VS8 718 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 RELL1Q8IUW5 271 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 MAP7D3Q8IWC1 876 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 SLAIN1Q8ND83 568 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 CLEC4CQ8WTT0 213 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 UROC1Q96N76 676 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 SYT15Q9BQS2 421 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 DDX23Q9BUQ8 820 aaKnown RBP18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 RAB6CQ9H0N0 254 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 SEMA4AQ9H3S1 761 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 NGRNQ9NPE2 291 aaKnown RBP18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 CRTAC1Q9NQ79 661 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 CACNG4Q9UBN1 327 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 CDH9Q9ULB4 789 aa18.82■□□□□ 0.6
HLA-DQB1-201ENST00000374943 SHOX2O60902 331 aaPredicted RBP18.81■□□□□ 0.6
HLA-DQB1-201ENST00000374943 INHAP05111 366 aa18.81■□□□□ 0.6
HLA-DQB1-201ENST00000374943 ACAT1P24752 427 aaKnown RBP18.81■□□□□ 0.6
HLA-DQB1-201ENST00000374943 MDH1BQ5I0G3 518 aa18.81■□□□□ 0.6
HLA-DQB1-201ENST00000374943 KDM7AQ6ZMT4 941 aa18.81■□□□□ 0.6
HLA-DQB1-201ENST00000374943 CLEC20AQ6ZU45 233 aa18.81■□□□□ 0.6
HLA-DQB1-201ENST00000374943 ECHDC2Q86YB7 292 aa18.81■□□□□ 0.6
HLA-DQB1-201ENST00000374943 HAUS1Q96CS2 278 aa18.81■□□□□ 0.6
HLA-DQB1-201ENST00000374943 CALN1Q9BXU9 219 aa18.81■□□□□ 0.6
HLA-DQB1-201ENST00000374943 PTCH2Q9Y6C5 1203 aa18.81■□□□□ 0.6
HLA-DQB1-201ENST00000374943 COL4A4P53420 1690 aaPredicted RBP18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 HTTP42858 3142 aa18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 CASTOR2A6NHX0 329 aa18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 DAB1O75553 588 aa18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 CYP11A1P05108 521 aa18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 ODC1P11926 461 aa18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 CKBP12277 381 aa18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 CHKAP35790 457 aa18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 VPS41P49754 854 aa18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 PRMT2P55345 433 aa18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 DYNLT1P63172 113 aa18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 ADCY1Q08828 1119 aa18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 IFFO1Q0D2I5 559 aa18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 TUSC3Q13454 348 aa18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 SLC29A2Q14542 456 aa18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 P3H1Q32P28 736 aa18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 KCTD16Q68DU8 428 aa18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 ZNF771Q7L3S4 317 aaPredicted RBP18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 STRADAQ7RTN6 431 aa18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 SH2D3CQ8N5H7 860 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms