RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 EXTL3O43909 919 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 C4BPAP04003 597 aaKnown RBP11.57□□□□□ -0.56
CCDC40-203ENST00000374877 RPL22P35268 128 aaKnown RBP11.57□□□□□ -0.56
CCDC40-203ENST00000374877 KRT72Q14CN4 511 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 CYP4A22Q5TCH4 519 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 C6orf163Q5TEZ5 329 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 NAT8LQ8N9F0 302 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 FBXO27Q8NI29 283 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 SLC35B2Q8TB61 432 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 GPRASP2Q96D09 838 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 APOPT1Q96IL0 206 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 DHRS4Q9BTZ2 278 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 MARCOQ9UEW3 520 aaPredicted RBP11.57□□□□□ -0.56
CCDC40-203ENST00000374877 NUB1Q9Y5A7 615 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 MYH9P35579 1960 aaKnown RBP11.57□□□□□ -0.56
CCDC40-203ENST00000374877 CCDC195A0A1B0GUA6 201 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 ANKRD33BA6NCL7 494 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 CIB2O75838 187 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 RTN3O95197 1032 aaPredicted RBP11.57□□□□□ -0.56
CCDC40-203ENST00000374877 KITP10721 976 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 HARSP12081 509 aaKnown RBP11.57□□□□□ -0.56
CCDC40-203ENST00000374877 JAK3P52333 1124 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 NRLP54845 237 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 MCCD1P59942 119 aaPredicted RBP11.57□□□□□ -0.56
CCDC40-203ENST00000374877 RASIP1Q5U651 963 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 RASAL3Q86YV0 1011 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 CTAGE3PQ8IX95 158 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 ZFAND2BQ8WV99 257 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 GATA6Q92908 595 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 THTPAQ9BU02 230 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 GABBR1Q9UBS5 961 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 MORF4L1Q9UBU8 362 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 FETUBQ9UGM5 382 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 KAT6AQ92794 2004 aa11.57□□□□□ -0.56
CCDC40-203ENST00000374877 A8MXQ7 604 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 NR3C2P08235 984 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 ELK3P41970 407 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 RPS6KA3P51812 740 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 CCNA1P78396 465 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 PSMD6Q15008 389 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 KBTBD12Q3ZCT8 623 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 MTHFD1LQ6UB35 978 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 FAM71DQ8N9W8 422 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 SMC1BQ8NDV3 1235 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 PARK7Q99497 189 aaKnown RBP11.56□□□□□ -0.56
CCDC40-203ENST00000374877 MECRQ9BV79 373 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 AGO2Q9UKV8 859 aaKnown RBP11.56□□□□□ -0.56
CCDC40-203ENST00000374877 MANSC4A6NHS7 340 aaPredicted RBP11.56□□□□□ -0.56
CCDC40-203ENST00000374877 I3L4J1 428 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 COPEO14579 308 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 TGDSO95455 350 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 BRD2P25440 801 aaKnown RBP11.56□□□□□ -0.56
CCDC40-203ENST00000374877 LRRC38Q5VT99 294 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 NCAPG2Q86XI2 1143 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 TREML1Q86YW5 311 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 IGDCC3Q8IVU1 814 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 ARID3BQ8IVW6 561 aaPredicted RBP11.56□□□□□ -0.56
CCDC40-203ENST00000374877 SLC25A41Q8N5S1 370 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 RBM15BQ8NDT2 890 aaKnown RBP11.56□□□□□ -0.56
CCDC40-203ENST00000374877 CDHR1Q96JP9 859 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 GPBP1L1Q9HC44 474 aaPredicted RBP11.56□□□□□ -0.56
CCDC40-203ENST00000374877 TXNRD2Q9NNW7 524 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 DDX56Q9NY93 547 aaKnown RBP11.56□□□□□ -0.56
CCDC40-203ENST00000374877 RBAKQ9NYW8 714 aaPredicted RBP11.56□□□□□ -0.56
CCDC40-203ENST00000374877 PDP2Q9P2J9 529 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 USP1O94782 785 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 CALB1P05937 261 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 ETV4P43268 484 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 TMPRSS15P98073 1019 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 ZNF200P98182 395 aaPredicted RBP11.56□□□□□ -0.56
CCDC40-203ENST00000374877 ZC3H12AQ5D1E8 599 aaKnown RBP11.56□□□□□ -0.56
CCDC40-203ENST00000374877 C1orf146Q5VVC0 180 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 RIPOR1Q6ZS17 1223 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 TAS1R3Q7RTX0 852 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 CHSY1Q86X52 802 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 UNC45BQ8IWX7 931 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 SCUBE1Q8IWY4 988 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 ZBTB45Q96K62 511 aaPredicted RBP11.56□□□□□ -0.56
CCDC40-203ENST00000374877 NTPCRQ9BSD7 190 aaKnown RBP11.56□□□□□ -0.56
CCDC40-203ENST00000374877 ARHGEF4Q9NR80 690 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 NDE1Q9NXR1 346 aa11.56□□□□□ -0.56
CCDC40-203ENST00000374877 SEPT9Q9UHD8 586 aaPredicted RBP11.56□□□□□ -0.56
CCDC40-203ENST00000374877 A0A1B0GVG6 124 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 TCRBV9S1A1TA0A576 114 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 KBTBD13C9JR72 458 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 LGR5O75473 907 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 LYNP07948 512 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 DHRS4L1P0CG22 281 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 ANPEPP15144 967 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 PSMA2P25787 234 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 SFNP31947 248 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 KRT76Q01546 638 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 PIGHQ14442 188 aaPredicted RBP11.55□□□□□ -0.56
CCDC40-203ENST00000374877 SEZ6Q53EL9 994 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 ZBTB41Q5SVQ8 909 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 RGMBQ6NW40 437 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 TMPRSS6Q8IU80 811 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.55□□□□□ -0.56
CCDC40-203ENST00000374877 GPRC5AQ8NFJ5 357 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 ACAP3Q96P50 834 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms