RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 MTMR12Q9C0I1 747 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 PRKAG2Q9UGJ0 569 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 FAM200BP0CF97 657 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 RARBP10826 455 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 TPP2P29144 1249 aaPredicted RBP14.69□□□□□ -0.06
LMX1B-202ENST00000373474 SNX17Q15036 470 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 SUGP1Q8IWZ8 645 aaKnown RBP14.69□□□□□ -0.06
LMX1B-202ENST00000373474 SHCBP1Q8NEM2 672 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 GTF3C2Q8WUA4 911 aaPredicted RBP14.69□□□□□ -0.06
LMX1B-202ENST00000373474 PABPC5Q96DU9 382 aaKnown RBP14.69□□□□□ -0.06
LMX1B-202ENST00000373474 AGO4Q9HCK5 861 aaKnown RBP14.69□□□□□ -0.06
LMX1B-202ENST00000373474 KANSL1LA0AUZ9 987 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 CLPTM1O96005 669 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 ITGA4P13612 1032 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 DMPKQ09013 629 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 VEPH1Q14D04 833 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 R3HDM1Q15032 1099 aaKnown RBP14.69□□□□□ -0.06
LMX1B-202ENST00000373474 SPDYCQ5MJ68 293 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 SPDYAQ5MJ70 313 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 FAXCQ5TGI0 409 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 DCUN1D1Q96GG9 259 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 POP1Q99575 1024 aaKnown RBP14.69□□□□□ -0.06
LMX1B-202ENST00000373474 DCLK3Q9C098 648 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 TAGLN3Q9UI15 199 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 PRPF4O43172 522 aaKnown RBP eCLIP14.68□□□□□ -0.06
LMX1B-202ENST00000373474 RRM1P23921 792 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 TRIM25Q14258 630 aaKnown RBP14.68□□□□□ -0.06
LMX1B-202ENST00000373474 NOTUMQ6P988 496 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 BTN2A2Q8WVV5 523 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 APBB2Q92870 758 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 ZDHHC15Q96MV8 337 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 CLEC4MQ9H2X3 399 aaPredicted RBP14.68□□□□□ -0.06
LMX1B-202ENST00000373474 IL17RBQ9NRM6 502 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 KIAA1257Q9ULG3 409 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 SNTNA6NMZ2 147 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 ANXA9O76027 345 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 EIF2B2P49770 351 aaKnown RBP14.68□□□□□ -0.06
LMX1B-202ENST00000373474 C17orf80Q9BSJ5 609 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 RIC8BQ9NVN3 520 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 FARP1Q9Y4F1 1045 aaPredicted RBP14.68□□□□□ -0.06
LMX1B-202ENST00000373474 CASZ1Q86V15 1759 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 SYNDIG1LA6NDD5 238 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 FKBP9O95302 570 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 SUPT20HL2P0C7V6 817 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 THRAP10827 490 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 C2CD6Q53TS8 623 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 MPZL3Q6UWV2 235 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 FKBP9P1Q75LS8 142 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 CDH24Q86UP0 819 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 WDR49Q8IV35 697 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 RTL3Q8N8U3 475 aaKnown RBP14.68□□□□□ -0.06
LMX1B-202ENST00000373474 POLLQ9UGP5 575 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 CYTH3O43739 400 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 UBOX5O94941 541 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 PCSK1P29120 753 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 TMEM62Q0P6H9 643 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 CCDC81Q6ZN84 652 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 SH3RF1Q7Z6J0 888 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 ATXN2LQ8WWM7 1075 aaKnown RBP14.68□□□□□ -0.06
LMX1B-202ENST00000373474 GLMNQ92990 594 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 WNK4Q96J92 1243 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 KLHL4Q9C0H6 718 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 ATAD3AQ9NVI7 634 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 SDR42E2A6NKP2 422 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 STX7O15400 261 aaKnown RBP14.68□□□□□ -0.06
LMX1B-202ENST00000373474 HIST1H2AGP0C0S8 130 aaPredicted RBP14.68□□□□□ -0.06
LMX1B-202ENST00000373474 FAM153BP0C7A2 387 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 NCAM1P13591 858 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 HIST1H2ADP20671 130 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 TNFRSF8P28908 595 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 PTPN4P29074 926 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 TAF6P49848 677 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 ZNF844Q08AG5 666 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 STX5Q13190 355 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 FAM153CQ494X1 144 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 SEZ6Q53EL9 994 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 PLEKHA7Q6IQ23 1121 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 MTDHQ86UE4 582 aaKnown RBP14.68□□□□□ -0.06
LMX1B-202ENST00000373474 C4orf19Q8IY42 314 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 DIS3LQ8TF46 1054 aaKnown RBP14.68□□□□□ -0.06
LMX1B-202ENST00000373474 JADE3Q92613 823 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 HIST1H2AHQ96KK5 128 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 HIST1H2AJQ99878 128 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 H2AFJQ9BTM1 129 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 RNF181Q9P0P0 153 aa14.68□□□□□ -0.06
LMX1B-202ENST00000373474 FAM237AA0A1B0GTK4 181 aa14.67□□□□□ -0.06
LMX1B-202ENST00000373474 FKBP6O75344 327 aa14.67□□□□□ -0.06
LMX1B-202ENST00000373474 S100A9P06702 114 aaKnown RBP14.67□□□□□ -0.06
LMX1B-202ENST00000373474 CAPN1P07384 714 aa14.67□□□□□ -0.06
LMX1B-202ENST00000373474 TGM2P21980 687 aa14.67□□□□□ -0.06
LMX1B-202ENST00000373474 CAP2P40123 477 aa14.67□□□□□ -0.06
LMX1B-202ENST00000373474 FAM83EQ2M2I3 478 aa14.67□□□□□ -0.06
LMX1B-202ENST00000373474 C6orf10Q5SRN2 563 aa14.67□□□□□ -0.06
LMX1B-202ENST00000373474 ARMC3Q5W041 872 aa14.67□□□□□ -0.06
LMX1B-202ENST00000373474 VPS50Q96JG6 964 aa14.67□□□□□ -0.06
LMX1B-202ENST00000373474 FAR2Q96K12 515 aa14.67□□□□□ -0.06
LMX1B-202ENST00000373474 TMEM121Q9BTD3 319 aa14.67□□□□□ -0.06
LMX1B-202ENST00000373474 ZBED2Q9BTP6 218 aa14.67□□□□□ -0.06
LMX1B-202ENST00000373474 ETAA1Q9NY74 926 aa14.67□□□□□ -0.06
LMX1B-202ENST00000373474 JCADQ9P266 1359 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms