RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 USP6NLQ92738 828 aa18.39■□□□□ 0.53
TRAF3IP1-201ENST00000373327 IL1RAPL1Q9NZN1 696 aa18.39■□□□□ 0.53
TRAF3IP1-201ENST00000373327 CPSF2Q9P2I0 782 aaKnown RBP18.39■□□□□ 0.53
TRAF3IP1-201ENST00000373327 B2RBV5 119 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 OPHN1O60890 802 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 FSBPO95073 299 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 LSM8O95777 96 aaKnown RBP18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 ERBB2P04626 1255 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 LGALS2P05162 132 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 MYL2P10916 166 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 DEUP1Q05D60 604 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 C16orf46Q6P387 395 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 TAS1R3Q7RTX0 852 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 GRAMD1AQ96CP6 724 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 VCPIP1Q96JH7 1222 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 SPC25Q9HBM1 224 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.38■□□□□ 0.534e-6■■■■□ 21.4
TRAF3IP1-201ENST00000373327 ASAP2O43150 1006 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 NCAM1P13591 858 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 EPHB2P29323 1055 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 PGM1P36871 562 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 CELF3Q5SZQ8 465 aaKnown RBP18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 BCORQ6W2J9 1755 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 COL16A1Q07092 1604 aaPredicted RBP18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 AHDC1Q5TGY3 1603 aaPredicted RBP18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 SNRPAP09012 282 aaKnown RBP18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 TGFB3P10600 412 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 FAM183BPQ6ZVS7 135 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 PHF13Q86YI8 300 aaPredicted RBP18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 ZNF669Q96BR6 464 aaPredicted RBP18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 TEPSINQ96N21 525 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 YIPF3Q9GZM5 350 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 KDM4CQ9H3R0 1056 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 MINDY3Q9H8M7 445 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 NUDT5Q9UKK9 219 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 STAP1Q9ULZ2 295 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 AP4E1Q9UPM8 1137 aa18.38■□□□□ 0.53
TRAF3IP1-201ENST00000373327 LRCH4O75427 683 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 CRCPO75575 148 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 ATP6V1G2O95670 118 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 ARF4P18085 180 aaPredicted RBP18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 GSTA1P08263 222 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 GSTA2P09210 222 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 CYP2F1P24903 491 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 TPI1P60174 286 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 ITIH4Q14624 930 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 SCARA3Q6AZY7 606 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 SLC2A14Q8TDB8 520 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 CKAP2Q8WWK9 683 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 RMDN2Q96LZ7 410 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 TPH1P17752 444 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 EIF4BP23588 611 aaKnown RBP18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 BEX3Q00994 111 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 DPYSL3Q14195 570 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 ALLCQ8N6M5 410 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 CAMKK2Q96RR4 588 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 OSBPL1AQ9BXW6 950 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 BFARQ9NZS9 450 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 SLC17A7Q9P2U7 560 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 BARX2Q9UMQ3 279 aaPredicted RBP18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 APOBEC2Q9Y235 224 aaKnown RBP18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 COQ4Q9Y3A0 265 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 DOCK2Q92608 1830 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 RPL10AP62906 217 aaKnown RBP18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 ELF3P78545 371 aaPredicted RBP18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 GRIK4Q16099 956 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 PCSK7Q16549 785 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 BOLA3Q53S33 107 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 PLEKHA7Q6IQ23 1121 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 C1orf127Q8N9H9 656 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 C18orf25Q96B23 403 aaPredicted RBP18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 LENG1Q96BZ8 264 aaPredicted RBP18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 MECRQ9BV79 373 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 ZNF518BQ9C0D4 1074 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 ST6GALNAC4Q9H4F1 302 aa18.37■□□□□ 0.53
TRAF3IP1-201ENST00000373327 SPECC1L-ADORA2AF8WAN1 911 aa18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 MAP3K7CLP57077 242 aa18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 OGDHQ02218 1023 aa18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 RIOX2Q8IUF8 465 aa18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 ZNF75CPQ92670 426 aaPredicted RBP18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 FAM136AQ96C01 138 aa18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 DDIT4Q9NX09 232 aa18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 USP2O75604 605 aaPredicted RBP18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 HMBSP08397 361 aa18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 STX3Q13277 289 aa18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 SLC1A5Q15758 541 aa18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 SLC25A41Q8N5S1 370 aa18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 CELF6Q96J87 481 aaKnown RBP18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 NTPCRQ9BSD7 190 aaKnown RBP18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 ADARB2Q9NS39 739 aaKnown RBP18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 RPS6KL1Q9Y6S9 549 aa18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 DGKIO75912 1065 aa18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 ATP4AP20648 1035 aa18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 SOX11P35716 441 aa18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 GLRBP48167 497 aa18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 ATXN1P54253 815 aaKnown RBP18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 GRAMD1BQ3KR37 738 aa18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 LBX2Q6XYB7 198 aa18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 E2F7Q96AV8 911 aa18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 TLCD1Q96CP7 247 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms