RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 LHX1P48742 406 aa16.87■□□□□ 0.29
C9orf78-201ENST00000372447 FAM193AP78312 1265 aa16.87■□□□□ 0.29
C9orf78-201ENST00000372447 PTP4A2Q12974 167 aa16.87■□□□□ 0.29
C9orf78-201ENST00000372447 FAM153CQ494X1 144 aa16.87■□□□□ 0.29
C9orf78-201ENST00000372447 CTXN3Q4LDR2 81 aa16.87■□□□□ 0.29
C9orf78-201ENST00000372447 ZNF394Q53GI3 561 aa16.87■□□□□ 0.29
C9orf78-201ENST00000372447 PDE12Q6L8Q7 609 aaKnown RBP16.87■□□□□ 0.29
C9orf78-201ENST00000372447 LLGL2Q6P1M3 1020 aa16.87■□□□□ 0.29
C9orf78-201ENST00000372447 MMS22LQ6ZRQ5 1243 aa16.87■□□□□ 0.29
C9orf78-201ENST00000372447 DEFB123Q8N688 67 aa16.87■□□□□ 0.29
C9orf78-201ENST00000372447 CLSTN3Q9BQT9 956 aa16.87■□□□□ 0.29
C9orf78-201ENST00000372447 TRIM7Q9C029 511 aa16.87■□□□□ 0.29
C9orf78-201ENST00000372447 CYP3A43Q9HB55 503 aa16.87■□□□□ 0.29
C9orf78-201ENST00000372447 RXFP1Q9HBX9 757 aa16.87■□□□□ 0.29
C9orf78-201ENST00000372447 DDX43Q9NXZ2 648 aaKnown RBP16.87■□□□□ 0.29
C9orf78-201ENST00000372447 MTRRQ9UBK8 725 aa16.87■□□□□ 0.29
C9orf78-201ENST00000372447 FAM153AQ9UHL3 310 aa16.87■□□□□ 0.29
C9orf78-201ENST00000372447 NME7Q9Y5B8 376 aa16.87■□□□□ 0.29
C9orf78-201ENST00000372447 BACE2Q9Y5Z0 518 aa16.87■□□□□ 0.29
C9orf78-201ENST00000372447 SCINQ9Y6U3 715 aa16.87■□□□□ 0.29
C9orf78-201ENST00000372447 GOLGA6BA6NDN3 693 aa16.86■□□□□ 0.29
C9orf78-201ENST00000372447 H7C4K7 107 aa16.86■□□□□ 0.29
C9orf78-201ENST00000372447 ADAM12O43184 909 aa16.86■□□□□ 0.29
C9orf78-201ENST00000372447 SYF2O95926 243 aaKnown RBP16.86■□□□□ 0.29
C9orf78-201ENST00000372447 CNPP09543 421 aaKnown RBP16.86■□□□□ 0.29
C9orf78-201ENST00000372447 BRD2P25440 801 aaKnown RBP16.86■□□□□ 0.29
C9orf78-201ENST00000372447 GNL1P36915 607 aaPredicted RBP16.86■□□□□ 0.29
C9orf78-201ENST00000372447 MAMLD1Q13495 774 aa16.86■□□□□ 0.29
C9orf78-201ENST00000372447 PLEKHA7Q6IQ23 1121 aa16.86■□□□□ 0.29
C9orf78-201ENST00000372447 ZNF280DQ6N043 979 aa16.86■□□□□ 0.29
C9orf78-201ENST00000372447 TSEN2Q8NCE0 465 aaKnown RBP16.86■□□□□ 0.29
C9orf78-201ENST00000372447 OR6B3Q8NGW1 331 aa16.86■□□□□ 0.29
C9orf78-201ENST00000372447 OR10T2Q8NGX3 314 aa16.86■□□□□ 0.29
C9orf78-201ENST00000372447 SPATA18Q8TC71 538 aa16.86■□□□□ 0.29
C9orf78-201ENST00000372447 LMCD1Q9NZU5 365 aa16.86■□□□□ 0.29
C9orf78-201ENST00000372447 FNIP2Q9P278 1114 aa16.86■□□□□ 0.29
C9orf78-201ENST00000372447 UTP11Q9Y3A2 253 aaKnown RBP16.86■□□□□ 0.29
C9orf78-201ENST00000372447 AGPSO00116 658 aa16.85■□□□□ 0.29
C9orf78-201ENST00000372447 TEX28O15482 410 aa16.85■□□□□ 0.29
C9orf78-201ENST00000372447 PDGFRBP09619 1106 aa16.85■□□□□ 0.29
C9orf78-201ENST00000372447 MMP8P22894 467 aa16.85■□□□□ 0.29
C9orf78-201ENST00000372447 ACAT1P24752 427 aaKnown RBP16.85■□□□□ 0.29
C9orf78-201ENST00000372447 ECHS1P30084 290 aa16.85■□□□□ 0.29
C9orf78-201ENST00000372447 GGCXP38435 758 aa16.85■□□□□ 0.29
C9orf78-201ENST00000372447 COL4A4P53420 1690 aaPredicted RBP16.85■□□□□ 0.29
C9orf78-201ENST00000372447 HLTFQ14527 1009 aaKnown RBP eCLIP16.85■□□□□ 0.29
C9orf78-201ENST00000372447 ALS2CLQ60I27 953 aa16.85■□□□□ 0.29
C9orf78-201ENST00000372447 ADGRD2Q7Z7M1 963 aa16.85■□□□□ 0.29
C9orf78-201ENST00000372447 SLC13A5Q86YT5 568 aaPredicted RBP16.85■□□□□ 0.29
C9orf78-201ENST00000372447 THEM5Q8N1Q8 247 aa16.85■□□□□ 0.29
C9orf78-201ENST00000372447 SEC14L1Q92503 715 aa16.85■□□□□ 0.29
C9orf78-201ENST00000372447 KLHL5Q96PQ7 755 aa16.85■□□□□ 0.29
C9orf78-201ENST00000372447 TMEM209Q96SK2 561 aa16.85■□□□□ 0.29
C9orf78-201ENST00000372447 CDX2Q99626 313 aaPredicted RBP16.85■□□□□ 0.29
C9orf78-201ENST00000372447 ZNF518BQ9C0D4 1074 aa16.85■□□□□ 0.29
C9orf78-201ENST00000372447 SNX25Q9H3E2 840 aa16.85■□□□□ 0.29
C9orf78-201ENST00000372447 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.85■□□□□ 0.29
C9orf78-201ENST00000372447 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.85■□□□□ 0.29
C9orf78-201ENST00000372447 PCDHGC3Q9UN70 934 aa16.85■□□□□ 0.29
C9orf78-201ENST00000372447 MTCH2Q9Y6C9 303 aa16.85■□□□□ 0.29
C9orf78-201ENST00000372447 CDY1Q9Y6F8 540 aa16.85■□□□□ 0.29
C9orf78-201ENST00000372447 A8MXQ7 604 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 PHF2O75151 1096 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 PROSCO94903 275 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 POU3F3P20264 500 aaPredicted RBP16.84■□□□□ 0.29
C9orf78-201ENST00000372447 IGFBP4P22692 258 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 CHRNA3P32297 505 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 OR1D2P34982 312 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 DR1Q01658 176 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 INCA1Q0VD86 236 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 DHX34Q14147 1143 aaKnown RBP16.84■□□□□ 0.29
C9orf78-201ENST00000372447 SLC8B1Q6J4K2 584 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 RBM23Q86U06 439 aaKnown RBP16.84■□□□□ 0.29
C9orf78-201ENST00000372447 MREGQ8N565 214 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 PRELID2Q8N945 189 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 TMEM35BQ8NCS4 154 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 GUCD1Q96NT3 240 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 ACBD6Q9BR61 282 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 PARVAQ9NVD7 372 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 VPS18Q9P253 973 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 HMGXB4Q9UGU5 601 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 BARX2Q9UMQ3 279 aaPredicted RBP16.84■□□□□ 0.29
C9orf78-201ENST00000372447 PRRC2BQ5JSZ5 2229 aaKnown RBP16.84■□□□□ 0.29
C9orf78-201ENST00000372447 FAM187AA6NFU0 413 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 PER2O15055 1255 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 CILPO75339 1184 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 CALB1P05937 261 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 OR4Q2P0C623 313 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 NDST1P52848 882 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 DDX42Q86XP3 938 aaKnown RBP eCLIP16.84■□□□□ 0.29
C9orf78-201ENST00000372447 C1orf131Q8NDD1 294 aaKnown RBP16.84■□□□□ 0.29
C9orf78-201ENST00000372447 TFAP2BQ92481 460 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 GAS2L1Q99501 681 aaPredicted RBP16.84■□□□□ 0.29
C9orf78-201ENST00000372447 EMILIN2Q9BXX0 1053 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 RAB17Q9H0T7 212 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 MTMR10Q9NXD2 777 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.84■□□□□ 0.29
C9orf78-201ENST00000372447 TSC2P49815 1807 aa16.84■□□□□ 0.29
C9orf78-201ENST00000372447 OR6C75A6NL08 312 aa16.83■□□□□ 0.28
C9orf78-201ENST00000372447 DAPK3O43293 454 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms