RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 C6orf118Q5T5N4 469 aa20.75■□□□□ 0.91
LHX3-202ENST00000371748 MFSD14CQ5VZR4 134 aa20.75■□□□□ 0.91
LHX3-202ENST00000371748 SCYL2Q6P3W7 929 aa20.75■□□□□ 0.91
LHX3-202ENST00000371748 ST3GAL5Q9UNP4 418 aa20.75■□□□□ 0.91
LHX3-202ENST00000371748 TRPV2Q9Y5S1 764 aa20.75■□□□□ 0.91
LHX3-202ENST00000371748 CEP350Q5VT06 3117 aa20.75■□□□□ 0.91
LHX3-202ENST00000371748 C5orf60A6NFR6 353 aa20.75■□□□□ 0.91
LHX3-202ENST00000371748 PRPSAP2O60256 369 aa20.75■□□□□ 0.91
LHX3-202ENST00000371748 KPNA6O60684 536 aa20.75■□□□□ 0.91
LHX3-202ENST00000371748 HUS1O60921 280 aa20.75■□□□□ 0.91
LHX3-202ENST00000371748 PECAM1P16284 738 aaPredicted RBP20.75■□□□□ 0.91
LHX3-202ENST00000371748 CCDC142Q17RM4 750 aa20.75■□□□□ 0.91
LHX3-202ENST00000371748 ADGRF2Q8IZF7 708 aa20.75■□□□□ 0.91
LHX3-202ENST00000371748 CRYBG2Q8N1P7 616 aa20.75■□□□□ 0.91
LHX3-202ENST00000371748 SLC2A14Q8TDB8 520 aa20.75■□□□□ 0.91
LHX3-202ENST00000371748 FAM172AQ8WUF8 416 aa20.75■□□□□ 0.91
LHX3-202ENST00000371748 TMEM109Q9BVC6 243 aa20.75■□□□□ 0.91
LHX3-202ENST00000371748 BST2Q10589 180 aaKnown RBP20.74■□□□□ 0.91
LHX3-202ENST00000371748 CCDC121Q6ZUS5 278 aa20.74■□□□□ 0.91
LHX3-202ENST00000371748 OSTM1Q86WC4 334 aa20.74■□□□□ 0.91
LHX3-202ENST00000371748 ANKRD52Q8NB46 1076 aa20.74■□□□□ 0.91
LHX3-202ENST00000371748 TTC13Q8NBP0 860 aa20.74■□□□□ 0.91
LHX3-202ENST00000371748 C9orf72Q96LT7 481 aa20.74■□□□□ 0.91
LHX3-202ENST00000371748 GPATCH2LQ9NWQ4 482 aa20.74■□□□□ 0.91
LHX3-202ENST00000371748 TPX2Q9ULW0 747 aaKnown RBP20.74■□□□□ 0.91
LHX3-202ENST00000371748 LCP1P13796 627 aa20.74■□□□□ 0.91
LHX3-202ENST00000371748 SDC4P31431 198 aa20.74■□□□□ 0.91
LHX3-202ENST00000371748 TM4SF4P48230 202 aa20.74■□□□□ 0.91
LHX3-202ENST00000371748 BCAT1P54687 386 aa20.74■□□□□ 0.91
LHX3-202ENST00000371748 AUHQ13825 339 aaKnown RBP20.74■□□□□ 0.91
LHX3-202ENST00000371748 PAXIP1Q6ZW49 1069 aaPredicted RBP20.74■□□□□ 0.91
LHX3-202ENST00000371748 ZCCHC9Q8N567 271 aaKnown RBP20.74■□□□□ 0.91
LHX3-202ENST00000371748 TSPAN18Q96SJ8 248 aa20.74■□□□□ 0.91
LHX3-202ENST00000371748 RBM15Q96T37 977 aaKnown RBP eCLIP20.74■□□□□ 0.91
LHX3-202ENST00000371748 RSAD1Q9HA92 442 aa20.74■□□□□ 0.91
LHX3-202ENST00000371748 PCDH9Q9HC56 1237 aa20.74■□□□□ 0.91
LHX3-202ENST00000371748 CD248Q9HCU0 757 aa20.74■□□□□ 0.91
LHX3-202ENST00000371748 SLC40A1Q9NP59 571 aa20.74■□□□□ 0.91
LHX3-202ENST00000371748 DNM1LO00429 736 aa20.73■□□□□ 0.91
LHX3-202ENST00000371748 DPYSL4O14531 572 aa20.73■□□□□ 0.91
LHX3-202ENST00000371748 RARBP10826 455 aa20.73■□□□□ 0.91
LHX3-202ENST00000371748 NPNTQ6UXI9 565 aa20.73■□□□□ 0.91
LHX3-202ENST00000371748 STK32AQ8WU08 396 aa20.73■□□□□ 0.91
LHX3-202ENST00000371748 SEC16BQ96JE7 1060 aa20.73■□□□□ 0.91
LHX3-202ENST00000371748 PPP1R10Q96QC0 940 aaKnown RBP20.73■□□□□ 0.91
LHX3-202ENST00000371748 DCAF8L1A6NGE4 600 aa20.73■□□□□ 0.91
LHX3-202ENST00000371748 APOC4-APOC2K7ER74 178 aa20.73■□□□□ 0.91
LHX3-202ENST00000371748 ATP2C2O75185 946 aa20.73■□□□□ 0.91
LHX3-202ENST00000371748 ENDOD1O94919 500 aa20.73■□□□□ 0.91
LHX3-202ENST00000371748 APOC2P02655 101 aa20.73■□□□□ 0.91
LHX3-202ENST00000371748 CHRNA1P02708 482 aa20.73■□□□□ 0.91
LHX3-202ENST00000371748 TFE3P19532 575 aaPredicted RBP20.73■□□□□ 0.91
LHX3-202ENST00000371748 MLH1P40692 756 aa20.73■□□□□ 0.91
LHX3-202ENST00000371748 AFF1P51825 1210 aaKnown RBP20.73■□□□□ 0.91
LHX3-202ENST00000371748 PRKCZQ05513 592 aa20.73■□□□□ 0.91
LHX3-202ENST00000371748 DPYSL3Q14195 570 aa20.73■□□□□ 0.91
LHX3-202ENST00000371748 ZC3H12AQ5D1E8 599 aaKnown RBP20.73■□□□□ 0.91
LHX3-202ENST00000371748 LIMS2Q7Z4I7 341 aa20.73■□□□□ 0.91
LHX3-202ENST00000371748 MDM1Q8TC05 714 aa20.73■□□□□ 0.91
LHX3-202ENST00000371748 LPPQ93052 612 aa20.73■□□□□ 0.91
LHX3-202ENST00000371748 MAK16Q9BXY0 300 aaKnown RBP20.73■□□□□ 0.91
LHX3-202ENST00000371748 ACTR5Q9H9F9 607 aaPredicted RBP20.73■□□□□ 0.91
LHX3-202ENST00000371748 SPC25Q9HBM1 224 aa20.73■□□□□ 0.91
LHX3-202ENST00000371748 FAM105AQ9NUU6 356 aa20.73■□□□□ 0.91
LHX3-202ENST00000371748 ACAT1P24752 427 aaKnown RBP20.72■□□□□ 0.91
LHX3-202ENST00000371748 TKTP29401 623 aaKnown RBP20.72■□□□□ 0.91
LHX3-202ENST00000371748 CROCCP2Q86T23 111 aa20.72■□□□□ 0.91
LHX3-202ENST00000371748 CHUKO15111 745 aa20.72■□□□□ 0.91
LHX3-202ENST00000371748 AGTP01019 485 aa20.72■□□□□ 0.91
LHX3-202ENST00000371748 LRPAP1P30533 357 aa20.72■□□□□ 0.91
LHX3-202ENST00000371748 SNX16P57768 344 aa20.72■□□□□ 0.91
LHX3-202ENST00000371748 EIF3EP60228 445 aaKnown RBP20.72■□□□□ 0.91
LHX3-202ENST00000371748 CAP1Q01518 475 aa20.72■□□□□ 0.91
LHX3-202ENST00000371748 KRT81Q14533 505 aa20.72■□□□□ 0.91
LHX3-202ENST00000371748 ANKRD20A8PQ5CZ79 823 aa20.72■□□□□ 0.91
LHX3-202ENST00000371748 RNASEH2BQ5TBB1 312 aaKnown RBP20.72■□□□□ 0.91
LHX3-202ENST00000371748 RSPH3Q86UC2 560 aa20.72■□□□□ 0.91
LHX3-202ENST00000371748 UNC45BQ8IWX7 931 aa20.72■□□□□ 0.91
LHX3-202ENST00000371748 TAB3Q8N5C8 712 aaPredicted RBP20.72■□□□□ 0.91
LHX3-202ENST00000371748 RSAD2Q8WXG1 361 aa20.72■□□□□ 0.91
LHX3-202ENST00000371748 GAD1Q99259 594 aa20.72■□□□□ 0.91
LHX3-202ENST00000371748 FRMD8P1Q9BZ68 369 aaPredicted RBP20.72■□□□□ 0.91
LHX3-202ENST00000371748 ROPN1BQ9BZX4 212 aaPredicted RBP20.72■□□□□ 0.91
LHX3-202ENST00000371748 SENP6Q9GZR1 1112 aaPredicted RBP20.72■□□□□ 0.91
LHX3-202ENST00000371748 UPF3AQ9H1J1 476 aaKnown RBP20.72■□□□□ 0.91
LHX3-202ENST00000371748 ROPN1Q9HAT0 212 aaPredicted RBP20.72■□□□□ 0.91
LHX3-202ENST00000371748 CYB561D2O14569 222 aa20.71■□□□□ 0.91
LHX3-202ENST00000371748 SEPT4O43236 478 aa20.71■□□□□ 0.91
LHX3-202ENST00000371748 MAP2K2P36507 400 aa20.71■□□□□ 0.91
LHX3-202ENST00000371748 MAGEA4P43358 317 aa20.71■□□□□ 0.91
LHX3-202ENST00000371748 CACNB2Q08289 660 aaPredicted RBP20.71■□□□□ 0.91
LHX3-202ENST00000371748 CCDC38Q502W7 563 aa20.71■□□□□ 0.91
LHX3-202ENST00000371748 HP1BP3Q5SSJ5 553 aaPredicted RBP20.71■□□□□ 0.91
LHX3-202ENST00000371748 ZDHHC17Q8IUH5 632 aa20.71■□□□□ 0.91
LHX3-202ENST00000371748 GPATCH11Q8N954 259 aa20.71■□□□□ 0.91
LHX3-202ENST00000371748 B3GALNT2Q8NCR0 500 aa20.71■□□□□ 0.91
LHX3-202ENST00000371748 GSTCDQ8NEC7 633 aa20.71■□□□□ 0.91
LHX3-202ENST00000371748 SPATA18Q8TC71 538 aa20.71■□□□□ 0.91
LHX3-202ENST00000371748 SELENOSQ9BQE4 189 aa20.71■□□□□ 0.91
LHX3-202ENST00000371748 SAYSD1Q9NPB0 183 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms