RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 BAP1Q92560 729 aa16.79■□□□□ 0.28
PFDN4-201ENST00000371419 IQCDQ96DY2 449 aa16.79■□□□□ 0.28
PFDN4-201ENST00000371419 TTYH3Q9C0H2 523 aa16.79■□□□□ 0.28
PFDN4-201ENST00000371419 SLITRK6Q9H5Y7 841 aa16.79■□□□□ 0.28
PFDN4-201ENST00000371419 LRRC4Q9HBW1 653 aa16.79■□□□□ 0.28
PFDN4-201ENST00000371419 ZMYM5Q9UJ78 669 aa16.79■□□□□ 0.28
PFDN4-201ENST00000371419 NCOR1O75376 2440 aa16.78■□□□□ 0.28
PFDN4-201ENST00000371419 SOBPA7XYQ1 873 aa16.78■□□□□ 0.28
PFDN4-201ENST00000371419 CFHP08603 1231 aa16.78■□□□□ 0.28
PFDN4-201ENST00000371419 DDX6P26196 483 aaKnown RBP eCLIP16.78■□□□□ 0.28
PFDN4-201ENST00000371419 GPD2P43304 727 aa16.78■□□□□ 0.28
PFDN4-201ENST00000371419 CCZ1BP86790 482 aa16.78■□□□□ 0.28
PFDN4-201ENST00000371419 CCZ1P86791 482 aaPredicted RBP16.78■□□□□ 0.28
PFDN4-201ENST00000371419 RAB41Q5JT25 222 aa16.78■□□□□ 0.28
PFDN4-201ENST00000371419 STXBP5Q5T5C0 1151 aa16.78■□□□□ 0.28
PFDN4-201ENST00000371419 GPR158Q5T848 1215 aa16.78■□□□□ 0.28
PFDN4-201ENST00000371419 EPS8L1Q8TE68 723 aa16.78■□□□□ 0.28
PFDN4-201ENST00000371419 KCTD13Q8WZ19 329 aa16.78■□□□□ 0.28
PFDN4-201ENST00000371419 HSFY1Q96LI6 401 aa16.78■□□□□ 0.28
PFDN4-201ENST00000371419 UHRF1Q96T88 793 aaPredicted RBP16.78■□□□□ 0.28
PFDN4-201ENST00000371419 PDCL3Q9H2J4 239 aa16.78■□□□□ 0.28
PFDN4-201ENST00000371419 TASP1Q9H6P5 420 aa16.78■□□□□ 0.28
PFDN4-201ENST00000371419 SCML2Q9UQR0 700 aa16.78■□□□□ 0.28
PFDN4-201ENST00000371419 USP3Q9Y6I4 520 aa16.78■□□□□ 0.28
PFDN4-201ENST00000371419 NCANO14594 1321 aa16.78■□□□□ 0.28
PFDN4-201ENST00000371419 ITIH6Q6UXX5 1313 aa16.78■□□□□ 0.28
PFDN4-201ENST00000371419 ZNF638Q14966 1978 aaKnown RBP16.77■□□□□ 0.28
PFDN4-201ENST00000371419 TTC28Q96AY4 2481 aa16.77■□□□□ 0.28
PFDN4-201ENST00000371419 A0A1W2PQJ5 194 aa16.77■□□□□ 0.28
PFDN4-201ENST00000371419 ZNF840PA6NDX5 716 aa16.77■□□□□ 0.28
PFDN4-201ENST00000371419 CCDC172P0C7W6 258 aa16.77■□□□□ 0.28
PFDN4-201ENST00000371419 FERP16591 822 aa16.77■□□□□ 0.28
PFDN4-201ENST00000371419 RGS7P49802 495 aa16.77■□□□□ 0.28
PFDN4-201ENST00000371419 TKTL1P51854 596 aa16.77■□□□□ 0.28
PFDN4-201ENST00000371419 TBX2Q13207 712 aaPredicted RBP16.77■□□□□ 0.28
PFDN4-201ENST00000371419 ARID5BQ14865 1188 aa16.77■□□□□ 0.28
PFDN4-201ENST00000371419 PMF1Q6P1K2 205 aa16.77■□□□□ 0.28
PFDN4-201ENST00000371419 POTEHQ6S545 545 aa16.77■□□□□ 0.28
PFDN4-201ENST00000371419 NOP9Q86U38 636 aaKnown RBP16.77■□□□□ 0.28
PFDN4-201ENST00000371419 MON1AQ86VX9 555 aa16.77■□□□□ 0.28
PFDN4-201ENST00000371419 ZNF677Q86XU0 584 aa16.77■□□□□ 0.28
PFDN4-201ENST00000371419 GJD3Q8N144 294 aa16.77■□□□□ 0.28
PFDN4-201ENST00000371419 ZSWIM3Q96MP5 696 aa16.77■□□□□ 0.28
PFDN4-201ENST00000371419 NECAB3Q96P71 396 aaPredicted RBP16.77■□□□□ 0.28
PFDN4-201ENST00000371419 LHX5Q9H2C1 402 aa16.77■□□□□ 0.28
PFDN4-201ENST00000371419 GMIPQ9P107 970 aa16.77■□□□□ 0.28
PFDN4-201ENST00000371419 CHORDC1Q9UHD1 332 aaPredicted RBP16.77■□□□□ 0.28
PFDN4-201ENST00000371419 NOCTQ9UK39 431 aaKnown RBP16.77■□□□□ 0.28
PFDN4-201ENST00000371419 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.77■□□□□ 0.287e-7■■□□□ 11.9
PFDN4-201ENST00000371419 LRRC53A6NM62 1247 aa16.76■□□□□ 0.27
PFDN4-201ENST00000371419 ARID5AQ03989 594 aa16.76■□□□□ 0.27
PFDN4-201ENST00000371419 TAF3Q5VWG9 929 aa16.76■□□□□ 0.27
PFDN4-201ENST00000371419 TXNDC8Q6A555 127 aa16.76■□□□□ 0.27
PFDN4-201ENST00000371419 GPIHBP1Q8IV16 184 aa16.76■□□□□ 0.27
PFDN4-201ENST00000371419 PASD1Q8IV76 773 aa16.76■□□□□ 0.27
PFDN4-201ENST00000371419 SIX6OS1Q8N1H7 587 aa16.76■□□□□ 0.27
PFDN4-201ENST00000371419 ZNF397Q8NF99 534 aaPredicted RBP16.76■□□□□ 0.27
PFDN4-201ENST00000371419 ZSCAN18Q8TBC5 510 aaPredicted RBP16.76■□□□□ 0.27
PFDN4-201ENST00000371419 STK32AQ8WU08 396 aa16.76■□□□□ 0.27
PFDN4-201ENST00000371419 DDX1Q92499 740 aaKnown RBP16.76■□□□□ 0.27
PFDN4-201ENST00000371419 SLC46A2Q9BY10 475 aa16.76■□□□□ 0.27
PFDN4-201ENST00000371419 KCND1Q9NSA2 647 aa16.76■□□□□ 0.27
PFDN4-201ENST00000371419 LIMD1Q9UGP4 676 aa16.76■□□□□ 0.27
PFDN4-201ENST00000371419 CEP83Q9Y592 693 aa16.76■□□□□ 0.27
PFDN4-201ENST00000371419 ZBED1O96006 694 aa16.75■□□□□ 0.27
PFDN4-201ENST00000371419 ABL1P00519 1130 aa16.75■□□□□ 0.27
PFDN4-201ENST00000371419 USP17L7P0C7H9 530 aa16.75■□□□□ 0.27
PFDN4-201ENST00000371419 ZDHHC11BP0C7U3 371 aa16.75■□□□□ 0.27
PFDN4-201ENST00000371419 ACADSBP45954 432 aa16.75■□□□□ 0.27
PFDN4-201ENST00000371419 CDR2Q01850 454 aa16.75■□□□□ 0.27
PFDN4-201ENST00000371419 ADIGQ0VDE8 80 aa16.75■□□□□ 0.27
PFDN4-201ENST00000371419 FAM78AQ5JUQ0 283 aa16.75■□□□□ 0.27
PFDN4-201ENST00000371419 DNTTIP2Q5QJE6 756 aaKnown RBP16.75■□□□□ 0.27
PFDN4-201ENST00000371419 SNX30Q5VWJ9 437 aa16.75■□□□□ 0.27
PFDN4-201ENST00000371419 MTSS1LQ765P7 747 aa16.75■□□□□ 0.27
PFDN4-201ENST00000371419 MAB21L3Q8N8X9 362 aa16.75■□□□□ 0.27
PFDN4-201ENST00000371419 SMARCD2Q92925 531 aa16.75■□□□□ 0.27
PFDN4-201ENST00000371419 ASB16Q96NS5 453 aa16.75■□□□□ 0.27
PFDN4-201ENST00000371419 TRPC7Q9HCX4 862 aa16.75■□□□□ 0.27
PFDN4-201ENST00000371419 CYLDQ9NQC7 956 aa16.75■□□□□ 0.27
PFDN4-201ENST00000371419 TLR8Q9NR97 1041 aaKnown RBP16.75■□□□□ 0.27
PFDN4-201ENST00000371419 ST7Q9NRC1 585 aa16.75■□□□□ 0.27
PFDN4-201ENST00000371419 CAPN11Q9UMQ6 739 aa16.75■□□□□ 0.27
PFDN4-201ENST00000371419 DENND4CQ5VZ89 1909 aa16.75■□□□□ 0.27
PFDN4-201ENST00000371419 OBSL1O75147 1896 aa16.75■□□□□ 0.27
PFDN4-201ENST00000371419 BDP1A6H8Y1 2624 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 TRAV19A0A0A6YYK7 116 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 ANHXE9PGG2 379 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 MMEP08473 750 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 LCP1P13796 627 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 PFKLP17858 780 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 WEE1P30291 646 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 RPL34P49207 117 aaKnown RBP16.74■□□□□ 0.27
PFDN4-201ENST00000371419 C1QBPQ07021 282 aaKnown RBP16.74■□□□□ 0.27
PFDN4-201ENST00000371419 PDCLQ13371 301 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 HTR4Q13639 388 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 ASIC2Q16515 512 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 SFMBT2Q5VUG0 894 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 PM20D1Q6GTS8 502 aa16.74■□□□□ 0.27
PFDN4-201ENST00000371419 IRF2BP2Q7Z5L9 587 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms