RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 ATP11AP98196 1134 aa18.36■□□□□ 0.53
SSBP3-203ENST00000371319 CDO1Q16878 200 aa18.36■□□□□ 0.53
SSBP3-203ENST00000371319 OVOS1Q6IE37 1185 aa18.36■□□□□ 0.53
SSBP3-203ENST00000371319 CCDC105Q8IYK2 499 aa18.36■□□□□ 0.53
SSBP3-203ENST00000371319 FAM172AQ8WUF8 416 aa18.36■□□□□ 0.53
SSBP3-203ENST00000371319 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.36■□□□□ 0.531e-9■■■■■ 83.4
SSBP3-203ENST00000371319 CENPIQ92674 756 aaPredicted RBP18.36■□□□□ 0.53
SSBP3-203ENST00000371319 TMEM209Q96SK2 561 aa18.36■□□□□ 0.53
SSBP3-203ENST00000371319 DDX23Q9BUQ8 820 aaKnown RBP18.36■□□□□ 0.53
SSBP3-203ENST00000371319 ADAM33Q9BZ11 813 aa18.36■□□□□ 0.53
SSBP3-203ENST00000371319 VIPAS39Q9H9C1 493 aa18.36■□□□□ 0.53
SSBP3-203ENST00000371319 HOMER3Q9NSC5 361 aa18.36■□□□□ 0.53
SSBP3-203ENST00000371319 TMLHEQ9NVH6 421 aa18.36■□□□□ 0.53
SSBP3-203ENST00000371319 HPCAL4Q9UM19 191 aa18.36■□□□□ 0.53
SSBP3-203ENST00000371319 PATJQ8NI35 1801 aa18.35■□□□□ 0.53
SSBP3-203ENST00000371319 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.35■□□□□ 0.53
SSBP3-203ENST00000371319 DCDC2CA8MYV0 355 aa18.35■□□□□ 0.53
SSBP3-203ENST00000371319 HHLA1C9JL84 531 aa18.35■□□□□ 0.53
SSBP3-203ENST00000371319 TJP3O95049 919 aa18.35■□□□□ 0.53
SSBP3-203ENST00000371319 CD48P09326 243 aa18.35■□□□□ 0.53
SSBP3-203ENST00000371319 TFE3P19532 575 aaPredicted RBP18.35■□□□□ 0.53
SSBP3-203ENST00000371319 OR1G1P47890 313 aa18.35■□□□□ 0.53
SSBP3-203ENST00000371319 NDUFV1P49821 464 aa18.35■□□□□ 0.53
SSBP3-203ENST00000371319 DRG2P55039 364 aaKnown RBP18.35■□□□□ 0.53
SSBP3-203ENST00000371319 CCL23P55773 120 aa18.35■□□□□ 0.53
SSBP3-203ENST00000371319 TLE2Q04725 743 aa18.35■□□□□ 0.53
SSBP3-203ENST00000371319 ODF2Q5BJF6 829 aa18.35■□□□□ 0.53
SSBP3-203ENST00000371319 EFHC1Q5JVL4 640 aa18.35■□□□□ 0.53
SSBP3-203ENST00000371319 DIS3LQ8TF46 1054 aaKnown RBP18.35■□□□□ 0.53
SSBP3-203ENST00000371319 NDRG1Q92597 394 aaKnown RBP18.35■□□□□ 0.53
SSBP3-203ENST00000371319 HSPH1Q92598 858 aa18.35■□□□□ 0.53
SSBP3-203ENST00000371319 TOX2Q96NM4 488 aa18.35■□□□□ 0.53
SSBP3-203ENST00000371319 RHOBTB2Q9BYZ6 727 aa18.35■□□□□ 0.53
SSBP3-203ENST00000371319 UBXN6Q9BZV1 441 aa18.35■□□□□ 0.53
SSBP3-203ENST00000371319 TRIM31Q9BZY9 425 aa18.35■□□□□ 0.53
SSBP3-203ENST00000371319 CSNK1G1Q9HCP0 422 aa18.35■□□□□ 0.53
SSBP3-203ENST00000371319 EFR3BQ9Y2G0 817 aa18.35■□□□□ 0.53
SSBP3-203ENST00000371319 TTC3P53804 2025 aa18.35■□□□□ 0.53
SSBP3-203ENST00000371319 DAB1O75553 588 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 ENDOD1O94919 500 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 ECEL1O95672 775 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 HDAC4P56524 1084 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 MRPS5P82675 430 aaKnown RBP18.34■□□□□ 0.53
SSBP3-203ENST00000371319 RNASELQ05823 741 aaKnown RBP18.34■□□□□ 0.53
SSBP3-203ENST00000371319 HLTFQ14527 1009 aaKnown RBP eCLIP18.34■□□□□ 0.53
SSBP3-203ENST00000371319 RAB41Q5JT25 222 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 C1orf53Q5VUE5 145 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 GPRIN1Q7Z2K8 1008 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 LRRTM3Q86VH5 581 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 THEM5Q8N1Q8 247 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 TSEN2Q8NCE0 465 aaKnown RBP18.34■□□□□ 0.53
SSBP3-203ENST00000371319 SMARCD1Q96GM5 515 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 FAM193BQ96PV7 902 aaPredicted RBP18.34■□□□□ 0.53
SSBP3-203ENST00000371319 FAM118BQ9BPY3 351 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 PPP1R12CQ9BZL4 782 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 NRDE2Q9H7Z3 1164 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 LRRC4Q9HBW1 653 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.34■□□□□ 0.532e-6■■□□□ 13.7
SSBP3-203ENST00000371319 GRHL1Q9NZI5 618 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 SNX24Q9Y343 169 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 MICAL3Q7RTP6 2002 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 BRCA2P51587 3418 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 FNDC1Q4ZHG4 1894 aaPredicted RBP18.34■□□□□ 0.53
SSBP3-203ENST00000371319 PRPSAP2O60256 369 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 HSF2BPO75031 334 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 CYP2C18P33260 490 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 TKTL1P51854 596 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 KRT222Q8N1A0 295 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 KCTD6Q8NC69 237 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 TEKT4Q8WW24 435 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 KCNK16Q96T55 309 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 NCAPGQ9BPX3 1015 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 NGRNQ9NPE2 291 aaKnown RBP18.34■□□□□ 0.53
SSBP3-203ENST00000371319 ZDHHC18Q9NUE0 388 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 LRFN2Q9ULH4 789 aa18.34■□□□□ 0.53
SSBP3-203ENST00000371319 PRG3Q9Y2Y8 225 aaPredicted RBP18.34■□□□□ 0.53
SSBP3-203ENST00000371319 VWA8A3KMH1 1905 aa18.33■□□□□ 0.53
SSBP3-203ENST00000371319 LIASO43766 372 aa18.33■□□□□ 0.52
SSBP3-203ENST00000371319 FBXO21O94952 628 aa18.33■□□□□ 0.52
SSBP3-203ENST00000371319 PARNO95453 639 aaKnown RBP18.33■□□□□ 0.52
SSBP3-203ENST00000371319 RPL21P46778 160 aaKnown RBP18.33■□□□□ 0.52
SSBP3-203ENST00000371319 KRT17Q04695 432 aa18.33■□□□□ 0.52
SSBP3-203ENST00000371319 PTK6Q13882 451 aa18.33■□□□□ 0.52
SSBP3-203ENST00000371319 DRICH1Q6PGQ1 229 aaPredicted RBP18.33■□□□□ 0.52
SSBP3-203ENST00000371319 ZDHHC24Q6UX98 284 aa18.33■□□□□ 0.52
SSBP3-203ENST00000371319 CTU1Q7Z7A3 348 aaKnown RBP18.33■□□□□ 0.52
SSBP3-203ENST00000371319 ABI1Q8IZP0 508 aa18.33■□□□□ 0.52
SSBP3-203ENST00000371319 DEFB106AQ8N104 65 aa18.33■□□□□ 0.52
SSBP3-203ENST00000371319 SIX6OS1Q8N1H7 587 aa18.33■□□□□ 0.52
SSBP3-203ENST00000371319 MREGQ8N565 214 aa18.33■□□□□ 0.52
SSBP3-203ENST00000371319 ATL2Q8NHH9 583 aa18.33■□□□□ 0.52
SSBP3-203ENST00000371319 GRK7Q8WTQ7 553 aa18.33■□□□□ 0.52
SSBP3-203ENST00000371319 ULBP1Q9BZM6 244 aa18.33■□□□□ 0.52
SSBP3-203ENST00000371319 TBX21Q9UL17 535 aa18.33■□□□□ 0.52
SSBP3-203ENST00000371319 NEU2Q9Y3R4 380 aa18.33■□□□□ 0.52
SSBP3-203ENST00000371319 COL4A4P53420 1690 aaPredicted RBP18.32■□□□□ 0.52
SSBP3-203ENST00000371319 NRP1O14786 923 aa18.32■□□□□ 0.52
SSBP3-203ENST00000371319 DESP17661 470 aa18.32■□□□□ 0.52
SSBP3-203ENST00000371319 MATKP42679 507 aa18.32■□□□□ 0.52
SSBP3-203ENST00000371319 DAOAP59103 153 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms