RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 OTUD5Q96G74 571 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 SIKE1Q9BRV8 207 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 THAP1Q9NVV9 213 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 CTNNAL1Q9UBT7 734 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 SYNDIG1LA6NDD5 238 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 PMPCBO75439 489 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 SERPINE1P05121 402 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 MLH1P40692 756 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 THEMIS2Q5TEJ8 643 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 TMEM79Q9BSE2 394 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 IL17RBQ9NRM6 502 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 CHST7Q9NS84 486 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 FBXO28Q9NVF7 368 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 STARD13Q9Y3M8 1113 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 PSMG1O95456 288 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 GNL1P36915 607 aaPredicted RBP17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 PLEKHA7Q6IQ23 1121 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 EFCAB12Q6NXP0 572 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 OTUB1Q96FW1 271 aaPredicted RBP17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 EVPLLA8MZ36 301 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 OPLAHO14841 1288 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 TNFAIP8O95379 198 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 ALADP13716 330 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 CHRNB3Q05901 458 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 CCDC15Q0P6D6 951 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 FUT11Q495W5 492 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 TCHHL1Q5QJ38 904 aaPredicted RBP17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 URGCPQ8TCY9 931 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 THUMPD3Q9BV44 507 aaKnown RBP17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 CHST12Q9NRB3 414 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 CISHQ9NSE2 258 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 KIAA1257Q9ULG3 409 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 DEPDC5O75140 1603 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 ICAM1P05362 532 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 NCAM1P13591 858 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 CPB1P15086 417 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 RAD51Q06609 339 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 MGAT5Q09328 741 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 N4BP2L1Q5TBK1 243 aaPredicted RBP17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 ZCCHC9Q8N567 271 aaKnown RBP17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 CCDC33Q8N5R6 958 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 POU5F2Q8N7G0 328 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 LINC00116Q8NCU8 138 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 NCKIPSDQ9NZQ3 722 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 EPHB6O15197 1021 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 RHOBTB1O94844 696 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 SLC1A6P48664 564 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 SV2CQ496J9 727 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 USP13Q92995 863 aaPredicted RBP17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 ZFRQ96KR1 1074 aaKnown RBP17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 SPATA17Q96L03 361 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 IARS2Q9NSE4 1012 aaKnown RBP17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 MEI4A8MW99 385 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 M0QYT0 321 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 SOAT2O75908 522 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 NAMPTP43490 491 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 POU4F1Q01851 419 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 TJAP1Q5JTD0 557 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 EFHBQ8N7U6 833 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 ZNF280CQ8ND82 737 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 ETNPPLQ8TBG4 499 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 ACOT9Q9Y305 439 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 C19orf81C9J6K1 198 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 KBTBD13C9JR72 458 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 DLGAP3O95886 979 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 RAG1P15918 1043 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 RGS4P49798 205 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 RAP1GDS1P52306 607 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 PPIDQ08752 370 aaKnown RBP17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 ITGA9Q13797 1035 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 MFSD7Q6UXD7 560 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 CCDC103Q8IW40 242 aa17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 AVENQ9NQS1 362 aaPredicted RBP17.69■□□□□ 0.42
PTP4A1-201ENST00000370651 KLRC4O43908 158 aa17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 FAM200BP0CF97 657 aa17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 MPP3Q13368 585 aa17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 KCNK18Q7Z418 384 aa17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 VCPIP1Q96JH7 1222 aa17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 NR1H4Q96RI1 486 aaPredicted RBP17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 DDX18Q9NVP1 670 aaKnown RBP17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 DNPEPQ9ULA0 475 aa17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 MROH7Q68CQ1 1323 aa17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 BAZ2BQ9UIF8 2168 aaKnown RBP17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 ATXN8OSP0DMR3 200 aa17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 ATP4AP20648 1035 aa17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 GTF2H3Q13889 308 aa17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 RNF43Q68DV7 783 aa17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 RTFDC1Q9BY42 306 aaPredicted RBP17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 C5orf58C9J3I9 102 aa17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 RIN3Q8TB24 985 aa17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 UBE2OQ9C0C9 1292 aaKnown RBP17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 BRD8Q9H0E9 1235 aa17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 KLHL25Q9H0H3 589 aa17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 CYP4F12Q9HCS2 524 aa17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 LRRIQ1Q96JM4 1722 aa17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 HBP1O60381 514 aa17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 NUDT17P0C025 328 aa17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 LRRC74AQ0VAA2 488 aa17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 STX19Q8N4C7 294 aa17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.68■□□□□ 0.421e-10■■■■■ 51.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms