RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 NDST1P52848 882 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 MRPS6P82932 125 aaKnown RBP10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 SP3Q02447 781 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 INCA1Q0VD86 236 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 ORC1Q13415 861 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 SLMAPQ14BN4 828 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 CNGA2Q16280 664 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 TWF2Q6IBS0 349 aaKnown RBP10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 ALKAL1Q6UXT8 129 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 REM2Q8IYK8 340 aaPredicted RBP10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 LRRC52Q8N7C0 313 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 ARHGEF2Q92974 986 aaKnown RBP10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 RNF25Q96BH1 459 aaPredicted RBP10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 TWNKQ96RR1 684 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 ADAM7Q9H2U9 754 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 XPNPEP3Q9NQH7 507 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 SNX9Q9Y5X1 595 aa10.45□□□□□ -0.74
PRPF38B-203ENST00000370025 TMEM191CA6NGB0 347 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 PHF2O75151 1096 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 HMGCRP04035 888 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 SP100P23497 879 aaPredicted RBP10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 EPHB2P29323 1055 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 ALDH3A1P30838 453 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 CETN2P41208 172 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 PTDSS1P48651 473 aaKnown RBP10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 DR1Q01658 176 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 CACNB2Q08289 660 aaPredicted RBP10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 DHX34Q14147 1143 aaKnown RBP10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 GLRA4Q5JXX5 417 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 GALNT15Q8N3T1 639 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 FAM81AQ8TBF8 368 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 C18orf8Q96DM3 657 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 ERP27Q96DN0 273 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 RBM41Q96IZ5 413 aaKnown RBP10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 RUNDC3BQ96NL0 473 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 WDR35Q9P2L0 1181 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 RASAL2Q9UJF2 1139 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 TRPV2Q9Y5S1 764 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 FAM187AA6NFU0 413 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 RPLP2P05387 115 aaKnown RBP10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 YY1P25490 414 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 ITIH4Q14624 930 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 STILQ15468 1287 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 HP1BP3Q5SSJ5 553 aaPredicted RBP10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 DPH6Q7L8W6 267 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 DNAJC9Q8WXX5 260 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 MCEEQ96PE7 176 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 FAM118BQ9BPY3 351 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 TUBGCP4Q9UGJ1 667 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 HMGXB4Q9UGU5 601 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 CDY2AQ9Y6F7 541 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 TMEM120BA0PK00 339 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 M0QYV0 167 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 MICAL2O94851 1124 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 CBX6O95503 412 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 GM2AP17900 193 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 RPL7AP62424 266 aaKnown RBP10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 DEUP1Q05D60 604 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 PIGHQ14442 188 aaPredicted RBP10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 UBXN11Q5T124 520 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 CYP4A22Q5TCH4 519 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 C18orf25Q96B23 403 aaPredicted RBP10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 DNAI2Q9GZS0 605 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 ERVK-5Q9HDB9 667 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 FAM114A2Q9NRY5 505 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 KLK14Q9P0G3 267 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 KLHL14Q9P2G3 628 aa10.44□□□□□ -0.74
PRPF38B-203ENST00000370025 SMIM28A0A1B0GU29 152 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 RASGRF2O14827 1237 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 AOC2O75106 756 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 GJB6O95452 261 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 TPP2P29144 1249 aaPredicted RBP10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 PSMC1P62191 440 aaKnown RBP10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 TRIM32Q13049 653 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 DEFB115Q30KQ5 88 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 C9orf57Q5W0N0 161 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 PRELID2Q8N945 189 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 ZNF560Q96MR9 790 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 CXCL16Q9H2A7 254 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 IPPQ9Y573 584 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 SCN10AQ9Y5Y9 1956 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 GOLGA8SH3BPF8 625 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 FSCN2O14926 492 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 KCNE1P15382 129 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 HOXD10P28358 340 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 NKX3-2P78367 333 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 TSNAXIP1Q2TAA8 658 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 PTPN20Q4JDL3 420 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 GDF6Q6KF10 455 aaPredicted RBP10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 DDX27Q96GQ7 796 aaKnown RBP10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 MIS12Q9H081 205 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 TCRBV5S1A1TA0A578 114 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 O00370 1275 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 KRT3P12035 628 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 STX2P32856 288 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 PNPLA4P41247 253 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 MYLK4Q86YV6 388 aaPredicted RBP10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 HACE1Q8IYU2 909 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 CAPNS2Q96L46 248 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms