RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 RXRGP48443 463 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 HIF1AQ16665 826 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 GPAT2Q6NUI2 795 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 KLHL35Q6PF15 583 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 C15orf39Q6ZRI6 1047 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 RAPH1Q70E73 1250 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 CCDC80Q76M96 950 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 RASSF3Q86WH2 238 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 PALM2Q8IXS6 379 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 SHKBP1Q8TBC3 707 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 LPAR1Q92633 364 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 DEFB129Q9H1M3 183 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 ARHGAP28Q9P2N2 729 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 NXF1Q9UBU9 619 aaKnown RBP16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 VWA5AO00534 786 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 LDHAP00338 332 aaKnown RBP16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 EGFRP00533 1210 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 CLCN2P51788 898 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 TMEM132AQ24JP5 1023 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 PLEKHG4Q58EX7 1191 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 LPCAT4Q643R3 524 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 CDR2LQ86X02 465 aaPredicted RBP16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 ALLCQ8N6M5 410 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 ATP11CQ8NB49 1132 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 HIPK4Q8NE63 616 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 FLAD1Q8NFF5 587 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 TSPAN18Q96SJ8 248 aa16.64■□□□□ 0.25
SYNCRIP-202ENST00000369622 ADCY3O60266 1144 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 TBC1D12O60347 775 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 BASP1P80723 227 aaKnown RBP16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 TFAMQ00059 246 aaKnown RBP16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 TRIM72Q6ZMU5 477 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 CLNKQ7Z7G1 428 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 TTC7BQ86TV6 843 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 RIN3Q8TB24 985 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 RSAD2Q8WXG1 361 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 MTMR12Q9C0I1 747 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 GINM1Q9NU53 330 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 PCNTO95613 3336 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 TTLL13PA6NNM8 815 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 CST8O60676 142 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 RGS20O76081 388 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 PABPC4LP0CB38 370 aaKnown RBP16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 GDF10P55107 478 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 MYL6P60660 151 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 GSTM4Q03013 218 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 PTP4A2Q12974 167 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 ACVR2BQ13705 512 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 CYLC2Q14093 348 aaPredicted RBP16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 TFDP3Q5H9I0 405 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 ANKRD22Q5VYY1 191 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 PHF13Q86YI8 300 aaPredicted RBP16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 EMC1Q8N766 993 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 RFWD2Q8NHY2 731 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 FBXO27Q8NI29 283 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 ACTL9Q8TC94 416 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 NSUN6Q8TEA1 469 aaKnown RBP16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 SLC7A3Q8WY07 619 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 TTC25Q96NG3 672 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 BTBD10Q9BSF8 475 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 LIN28AQ9H9Z2 209 aaKnown RBP16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 PPM1HQ9ULR3 514 aa16.63■□□□□ 0.25
SYNCRIP-202ENST00000369622 TMEM191CA6NGB0 347 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 TMEM191BP0C7N4 346 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 FGFR1P11362 822 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 KCNA2P16389 499 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 ZFXP17010 805 aaPredicted RBP16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 MMP8P22894 467 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 PSMA2P25787 234 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 HSPA1LP34931 641 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 HIRAP54198 1017 aaPredicted RBP16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 C1QBPQ07021 282 aaKnown RBP16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 ZNF252P-AS1Q0IIN9 211 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 OTOAQ7RTW8 1153 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 ZNF75CPQ92670 426 aaPredicted RBP16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 GMLQ99445 158 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 GRIP2Q9C0E4 1043 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 TJP2Q9UDY2 1190 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 STARD13Q9Y3M8 1113 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 ACTL7BQ9Y614 415 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 RBBP6Q7Z6E9 1792 aaKnown RBP16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 PEX10O60683 326 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 KRT19P08727 400 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 SRGAP2CP0DJJ0 459 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 ANPEPP15144 967 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 GLRA2P23416 452 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 PGM1P36871 562 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 VCPP55072 806 aaKnown RBP16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 OTUD4Q01804 1114 aaKnown RBP16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 NR1H3Q13133 447 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 MOGSQ13724 837 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 PDE1CQ14123 709 aaPredicted RBP16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 GSTA3Q16772 222 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 PSMC3IPQ9P2W1 217 aaPredicted RBP16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 RBMX2Q9Y388 322 aaKnown RBP16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 COL11A2P13942 1736 aaPredicted RBP16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 EDF1O60869 148 aaKnown RBP16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 HMGCS2P54868 508 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 TRPC3Q13507 836 aa16.62■□□□□ 0.25
SYNCRIP-202ENST00000369622 PDK4Q16654 411 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms