RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 ALADP13716 330 aa15.9■□□□□ 0.14
SMPDL3A-201ENST00000368440 POLR2FP61218 127 aaKnown RBP15.9■□□□□ 0.14
SMPDL3A-201ENST00000368440 RAB41Q5JT25 222 aa15.9■□□□□ 0.14
SMPDL3A-201ENST00000368440 DENND1BQ6P3S1 775 aa15.9■□□□□ 0.14
SMPDL3A-201ENST00000368440 FAM71AQ8IYT1 594 aa15.9■□□□□ 0.14
SMPDL3A-201ENST00000368440 ARL14EPQ8N8R7 260 aaPredicted RBP15.9■□□□□ 0.14
SMPDL3A-201ENST00000368440 ZNF606Q8WXB4 792 aa15.9■□□□□ 0.14
SMPDL3A-201ENST00000368440 USP13Q92995 863 aaPredicted RBP15.9■□□□□ 0.14
SMPDL3A-201ENST00000368440 PCMTD1Q96MG8 357 aaPredicted RBP15.9■□□□□ 0.14
SMPDL3A-201ENST00000368440 NLRC4Q9NPP4 1024 aa15.9■□□□□ 0.14
SMPDL3A-201ENST00000368440 USP3Q9Y6I4 520 aa15.9■□□□□ 0.14
SMPDL3A-201ENST00000368440 A0A1B0GTH6 734 aa15.89■□□□□ 0.13
SMPDL3A-201ENST00000368440 F8VZ95 297 aa15.89■□□□□ 0.13
SMPDL3A-201ENST00000368440 GABBR2O75899 941 aa15.89■□□□□ 0.13
SMPDL3A-201ENST00000368440 ZDHHC11BP0C7U3 371 aa15.89■□□□□ 0.13
SMPDL3A-201ENST00000368440 SETSIPP0DME0 302 aa15.89■□□□□ 0.13
SMPDL3A-201ENST00000368440 RFX1P22670 979 aa15.89■□□□□ 0.13
SMPDL3A-201ENST00000368440 AVPR1AP37288 418 aa15.89■□□□□ 0.13
SMPDL3A-201ENST00000368440 PLA2G4AP47712 749 aa15.89■□□□□ 0.13
SMPDL3A-201ENST00000368440 RGS7P49802 495 aa15.89■□□□□ 0.13
SMPDL3A-201ENST00000368440 STILQ15468 1287 aa15.89■□□□□ 0.13
SMPDL3A-201ENST00000368440 SLC47A2Q86VL8 602 aa15.89■□□□□ 0.13
SMPDL3A-201ENST00000368440 PDZD8Q8NEN9 1154 aa15.89■□□□□ 0.13
SMPDL3A-201ENST00000368440 OVCA2Q8WZ82 227 aa15.89■□□□□ 0.13
SMPDL3A-201ENST00000368440 UBXN6Q9BZV1 441 aa15.89■□□□□ 0.13
SMPDL3A-201ENST00000368440 RNF38Q9H0F5 515 aa15.89■□□□□ 0.13
SMPDL3A-201ENST00000368440 FBXO44Q9H4M3 255 aa15.89■□□□□ 0.13
SMPDL3A-201ENST00000368440 NMUR1Q9HB89 426 aa15.89■□□□□ 0.13
SMPDL3A-201ENST00000368440 OSER1Q9NX31 292 aa15.89■□□□□ 0.13
SMPDL3A-201ENST00000368440 SCML2Q9UQR0 700 aa15.89■□□□□ 0.13
SMPDL3A-201ENST00000368440 TRAV19A0A0A6YYK7 116 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 FAM86C2PA6NEL3 165 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 GOLGA6L19H0YKK7 550 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 PIK3R2O00459 728 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 OAS1P00973 400 aaKnown RBP15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 CKMP06732 381 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 WEE1P30291 646 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 PPP3CCP48454 512 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 SLC8A3P57103 927 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 GPC5P78333 572 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 FANCCQ00597 558 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 IER5LQ5T953 404 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 PMF1Q6P1K2 205 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 UBALD2Q8IYN6 164 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 SLC35F5Q8WV83 523 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 NDRG1Q92597 394 aaKnown RBP15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 STK33Q9BYT3 514 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 CCSER2Q9H7U1 834 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 C11orf16Q9NQ32 467 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 ZMYM5Q9UJ78 669 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 A0A1W2PQH9 124 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 SERPINC1P01008 464 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 USP17L7P0C7H9 530 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 SRFP11831 508 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 TKTL1P51854 596 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 JAM2P57087 298 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 TPM4P67936 248 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 ZXDBP98169 803 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 ADIGQ0VDE8 80 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 SNX30Q5VWJ9 437 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 CCDC186Q7Z3E2 898 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 SCD5Q86SK9 330 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 NEK11Q8NG66 645 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 ULBP1Q9BZM6 244 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 TDP1Q9NUW8 608 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 CYTH4Q9UIA0 394 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 TECTAO75443 2155 aa15.88■□□□□ 0.13
SMPDL3A-201ENST00000368440 SOBPA7XYQ1 873 aa15.87■□□□□ 0.13
SMPDL3A-201ENST00000368440 MED7O43513 233 aa15.87■□□□□ 0.13
SMPDL3A-201ENST00000368440 OLFM2O95897 454 aa15.87■□□□□ 0.13
SMPDL3A-201ENST00000368440 PSMC3P17980 439 aa15.87■□□□□ 0.13
SMPDL3A-201ENST00000368440 HDCP19113 662 aa15.87■□□□□ 0.13
SMPDL3A-201ENST00000368440 GPD2P43304 727 aa15.87■□□□□ 0.13
SMPDL3A-201ENST00000368440 PTK2Q05397 1052 aa15.87■□□□□ 0.13
SMPDL3A-201ENST00000368440 SIGLEC14Q08ET2 396 aa15.87■□□□□ 0.13
SMPDL3A-201ENST00000368440 FILIP1LQ4L180 1135 aa15.87■□□□□ 0.13
SMPDL3A-201ENST00000368440 TRIM67Q6ZTA4 783 aa15.87■□□□□ 0.13
SMPDL3A-201ENST00000368440 BHLHA9Q7RTU4 235 aa15.87■□□□□ 0.13
SMPDL3A-201ENST00000368440 MFSD6LQ8IWD5 586 aa15.87■□□□□ 0.13
SMPDL3A-201ENST00000368440 ASIC4Q96FT7 647 aa15.87■□□□□ 0.13
SMPDL3A-201ENST00000368440 DPYSL4O14531 572 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 COCHO43405 550 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 LCP1P13796 627 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 NR1I3Q14994 352 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 PASD1Q8IV76 773 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 CELF5Q8N6W0 485 aaKnown RBP15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 TTC16Q8NEE8 873 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 KCTD13Q8WZ19 329 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 ZFYVE19Q96K21 471 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 LRRC4Q9HBW1 653 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 SLC2A4RGQ9NR83 387 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 TLR8Q9NR97 1041 aaKnown RBP15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 GFPT2O94808 682 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 CYP11B1P15538 503 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 GDI1P31150 447 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 FCHO2Q0JRZ9 810 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 USP4Q13107 963 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 ZNF268Q14587 947 aaPredicted RBP15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 HECTD3Q5T447 861 aa15.86■□□□□ 0.13
SMPDL3A-201ENST00000368440 NOP9Q86U38 636 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms