RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 ULBP1Q9BZM6 244 aa16.69■□□□□ 0.26
LMNA-203ENST00000368297 ALG13Q9NP73 1137 aaKnown RBP16.69■□□□□ 0.26
LMNA-203ENST00000368297 PNPLA8Q9NP80 782 aa16.69■□□□□ 0.26
LMNA-203ENST00000368297 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.69■□□□□ 0.264e-6■□□□□ 8.2
LMNA-203ENST00000368297 LCMT1Q9UIC8 334 aa16.69■□□□□ 0.26
LMNA-203ENST00000368297 PACSIN2Q9UNF0 486 aaPredicted RBP16.69■□□□□ 0.26
LMNA-203ENST00000368297 USTQ9Y2C2 406 aa16.69■□□□□ 0.26
LMNA-203ENST00000368297 PCDHA11Q9Y5I1 949 aa16.69■□□□□ 0.26
LMNA-203ENST00000368297 PATJQ8NI35 1801 aa16.69■□□□□ 0.26
LMNA-203ENST00000368297 CTSAP10619 480 aa16.69■□□□□ 0.26
LMNA-203ENST00000368297 COMTP21964 271 aa16.69■□□□□ 0.26
LMNA-203ENST00000368297 MRPS5P82675 430 aaKnown RBP16.69■□□□□ 0.26
LMNA-203ENST00000368297 ADCY1Q08828 1119 aa16.69■□□□□ 0.26
LMNA-203ENST00000368297 IFRD2Q12894 506 aaPredicted RBP16.69■□□□□ 0.26
LMNA-203ENST00000368297 DDR2Q16832 855 aa16.69■□□□□ 0.26
LMNA-203ENST00000368297 RAB41Q5JT25 222 aa16.69■□□□□ 0.26
LMNA-203ENST00000368297 EFHC1Q5JVL4 640 aa16.69■□□□□ 0.26
LMNA-203ENST00000368297 CCDC70Q6NSX1 233 aa16.69■□□□□ 0.26
LMNA-203ENST00000368297 NT5DC3Q86UY8 548 aa16.69■□□□□ 0.26
LMNA-203ENST00000368297 TTC9BQ8N6N2 239 aa16.69■□□□□ 0.26
LMNA-203ENST00000368297 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.69■□□□□ 0.26
LMNA-203ENST00000368297 NDRG1Q92597 394 aaKnown RBP16.69■□□□□ 0.26
LMNA-203ENST00000368297 FAM149B1Q96BN6 582 aa16.69■□□□□ 0.26
LMNA-203ENST00000368297 C8orf48Q96LL4 319 aa16.69■□□□□ 0.26
LMNA-203ENST00000368297 GDF15Q99988 308 aa16.69■□□□□ 0.26
LMNA-203ENST00000368297 ENTPD7Q9NQZ7 604 aa16.69■□□□□ 0.26
LMNA-203ENST00000368297 CES2O00748 559 aa16.68■□□□□ 0.26
LMNA-203ENST00000368297 ZNF185O15231 689 aa16.68■□□□□ 0.26
LMNA-203ENST00000368297 ARHGEF15O94989 841 aa16.68■□□□□ 0.26
LMNA-203ENST00000368297 CSPG5O95196 566 aa16.68■□□□□ 0.26
LMNA-203ENST00000368297 CXCL14O95715 111 aa16.68■□□□□ 0.26
LMNA-203ENST00000368297 HAPLN1P10915 354 aaPredicted RBP16.68■□□□□ 0.26
LMNA-203ENST00000368297 GPD1P21695 349 aa16.68■□□□□ 0.26
LMNA-203ENST00000368297 PSMA2P25787 234 aa16.68■□□□□ 0.26
LMNA-203ENST00000368297 SCNN1AP37088 669 aa16.68■□□□□ 0.26
LMNA-203ENST00000368297 SSR1P43307 286 aaKnown RBP16.68■□□□□ 0.26
LMNA-203ENST00000368297 GPR15P49685 360 aa16.68■□□□□ 0.26
LMNA-203ENST00000368297 OGDHQ02218 1023 aa16.68■□□□□ 0.26
LMNA-203ENST00000368297 ITIH3Q06033 890 aa16.68■□□□□ 0.26
LMNA-203ENST00000368297 DUSP4Q13115 394 aa16.68■□□□□ 0.26
LMNA-203ENST00000368297 TAF5Q15542 800 aa16.68■□□□□ 0.26
LMNA-203ENST00000368297 SDHAF4Q5VUM1 108 aa16.68■□□□□ 0.26
LMNA-203ENST00000368297 SLC26A9Q7LBE3 791 aa16.68■□□□□ 0.26
LMNA-203ENST00000368297 CREG2Q8IUH2 290 aa16.68■□□□□ 0.26
LMNA-203ENST00000368297 GPR65Q8IYL9 337 aa16.68■□□□□ 0.26
LMNA-203ENST00000368297 PBKQ96KB5 322 aa16.68■□□□□ 0.26
LMNA-203ENST00000368297 CNGB3Q9NQW8 809 aa16.68■□□□□ 0.26
LMNA-203ENST00000368297 AFF4Q9UHB7 1163 aaKnown RBP16.68■□□□□ 0.26
LMNA-203ENST00000368297 TMEM59LQ9UK28 342 aa16.68■□□□□ 0.26
LMNA-203ENST00000368297 LZTS1Q9Y250 596 aa16.68■□□□□ 0.26
LMNA-203ENST00000368297 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.67■□□□□ 0.26
LMNA-203ENST00000368297 SART1O43290 800 aaKnown RBP16.67■□□□□ 0.26
LMNA-203ENST00000368297 SOAT2O75908 522 aa16.67■□□□□ 0.26
LMNA-203ENST00000368297 VNN2O95498 520 aa16.67■□□□□ 0.26
LMNA-203ENST00000368297 ZBED1O96006 694 aa16.67■□□□□ 0.26
LMNA-203ENST00000368297 USP17L7P0C7H9 530 aa16.67■□□□□ 0.26
LMNA-203ENST00000368297 PDGFRAP16234 1089 aa16.67■□□□□ 0.26
LMNA-203ENST00000368297 SLC1A1P43005 524 aa16.67■□□□□ 0.26
LMNA-203ENST00000368297 SLC5A3P53794 718 aa16.67■□□□□ 0.26
LMNA-203ENST00000368297 RPL10AP62906 217 aaKnown RBP16.67■□□□□ 0.26
LMNA-203ENST00000368297 PIGHQ14442 188 aaPredicted RBP16.67■□□□□ 0.26
LMNA-203ENST00000368297 TPGS2Q68CL5 300 aa16.67■□□□□ 0.26
LMNA-203ENST00000368297 ZNF572Q7Z3I7 529 aaPredicted RBP16.67■□□□□ 0.26
LMNA-203ENST00000368297 SPRED2Q7Z698 418 aa16.67■□□□□ 0.26
LMNA-203ENST00000368297 CPNE8Q86YQ8 564 aa16.67■□□□□ 0.26
LMNA-203ENST00000368297 RXFP2Q8WXD0 754 aa16.67■□□□□ 0.26
LMNA-203ENST00000368297 SAMD11Q96NU1 681 aa16.67■□□□□ 0.26
LMNA-203ENST00000368297 TGS1Q96RS0 853 aaKnown RBP16.67■□□□□ 0.26
LMNA-203ENST00000368297 TCF25Q9BQ70 676 aa16.67■□□□□ 0.26
LMNA-203ENST00000368297 C11orf84Q9BUA3 381 aaPredicted RBP16.67■□□□□ 0.26
LMNA-203ENST00000368297 CRISPLD1Q9H336 500 aa16.67■□□□□ 0.26
LMNA-203ENST00000368297 FNIP2Q9P278 1114 aa16.67■□□□□ 0.26
LMNA-203ENST00000368297 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.66■□□□□ 0.26
LMNA-203ENST00000368297 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.66■□□□□ 0.26
LMNA-203ENST00000368297 LPXNO60711 386 aa16.66■□□□□ 0.26
LMNA-203ENST00000368297 HSF2BPO75031 334 aa16.66■□□□□ 0.26
LMNA-203ENST00000368297 RB1P06400 928 aa16.66■□□□□ 0.26
LMNA-203ENST00000368297 DESP17661 470 aa16.66■□□□□ 0.26
LMNA-203ENST00000368297 MAN1A1P33908 653 aa16.66■□□□□ 0.26
LMNA-203ENST00000368297 FLT3P36888 993 aa16.66■□□□□ 0.26
LMNA-203ENST00000368297 DAOAP59103 153 aa16.66■□□□□ 0.26
LMNA-203ENST00000368297 ZNF252P-AS1Q0IIN9 211 aa16.66■□□□□ 0.26
LMNA-203ENST00000368297 RAB33AQ14088 237 aa16.66■□□□□ 0.26
LMNA-203ENST00000368297 ZNF461Q8TAF7 563 aa16.66■□□□□ 0.26
LMNA-203ENST00000368297 COG1Q8WTW3 980 aa16.66■□□□□ 0.26
LMNA-203ENST00000368297 POF1BQ8WVV4 589 aa16.66■□□□□ 0.26
LMNA-203ENST00000368297 PSMB7Q99436 277 aa16.66■□□□□ 0.26
LMNA-203ENST00000368297 RXFP1Q9HBX9 757 aa16.66■□□□□ 0.26
LMNA-203ENST00000368297 MSRAQ9UJ68 235 aa16.66■□□□□ 0.26
LMNA-203ENST00000368297 YBX2Q9Y2T7 364 aaKnown RBP16.66■□□□□ 0.26
LMNA-203ENST00000368297 C2CD4BA6NLJ0 364 aa16.65■□□□□ 0.26
LMNA-203ENST00000368297 MIF4GDA9UHW6 222 aaKnown RBP16.65■□□□□ 0.26
LMNA-203ENST00000368297 TEX28O15482 410 aa16.65■□□□□ 0.26
LMNA-203ENST00000368297 LILRB3O75022 631 aa16.65■□□□□ 0.26
LMNA-203ENST00000368297 ABLIM3O94929 683 aa16.65■□□□□ 0.26
LMNA-203ENST00000368297 H2AFXP16104 143 aaPredicted RBP16.65■□□□□ 0.26
LMNA-203ENST00000368297 MCM3P25205 808 aa16.65■□□□□ 0.26
LMNA-203ENST00000368297 SDC4P31431 198 aa16.65■□□□□ 0.26
LMNA-203ENST00000368297 CXCR5P32302 372 aa16.65■□□□□ 0.26
LMNA-203ENST00000368297 ELF1P32519 619 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms