RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 CKMP06732 381 aa23.67■■□□□ 1.38
ECHDC1-203ENST00000368291 BCAT1P54687 386 aa23.67■■□□□ 1.38
ECHDC1-203ENST00000368291 RAB41Q5JT25 222 aa23.67■■□□□ 1.38
ECHDC1-203ENST00000368291 LCLAT1Q6UWP7 414 aa23.67■■□□□ 1.38
ECHDC1-203ENST00000368291 UBA3Q8TBC4 463 aa23.67■■□□□ 1.38
ECHDC1-203ENST00000368291 IRF7Q92985 503 aa23.67■■□□□ 1.38
ECHDC1-203ENST00000368291 ZFYVE19Q96K21 471 aa23.67■■□□□ 1.38
ECHDC1-203ENST00000368291 BPIFA3Q9BQP9 254 aa23.67■■□□□ 1.38
ECHDC1-203ENST00000368291 HEBP1Q9NRV9 189 aa23.67■■□□□ 1.38
ECHDC1-203ENST00000368291 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.67■■□□□ 1.38
ECHDC1-203ENST00000368291 F5P12259 2224 aa23.67■■□□□ 1.38
ECHDC1-203ENST00000368291 SYCE3A1L190 88 aa23.66■■□□□ 1.38
ECHDC1-203ENST00000368291 CYP26A1O43174 497 aa23.66■■□□□ 1.38
ECHDC1-203ENST00000368291 KRT5P13647 590 aa23.66■■□□□ 1.38
ECHDC1-203ENST00000368291 VCPP55072 806 aaKnown RBP23.66■■□□□ 1.38
ECHDC1-203ENST00000368291 STARD6P59095 220 aa23.66■■□□□ 1.38
ECHDC1-203ENST00000368291 SLC7A9P82251 487 aa23.66■■□□□ 1.38
ECHDC1-203ENST00000368291 BST2Q10589 180 aaKnown RBP23.66■■□□□ 1.38
ECHDC1-203ENST00000368291 USP4Q13107 963 aa23.66■■□□□ 1.38
ECHDC1-203ENST00000368291 MLF2Q15773 248 aaPredicted RBP23.66■■□□□ 1.38
ECHDC1-203ENST00000368291 ZNF77Q15935 545 aa23.66■■□□□ 1.38
ECHDC1-203ENST00000368291 CNGA2Q16280 664 aa23.66■■□□□ 1.38
ECHDC1-203ENST00000368291 ARHGAP44Q17R89 818 aa23.66■■□□□ 1.38
ECHDC1-203ENST00000368291 DHX40Q8IX18 779 aaKnown RBP23.66■■□□□ 1.38
ECHDC1-203ENST00000368291 YAF2Q8IY57 180 aa23.66■■□□□ 1.38
ECHDC1-203ENST00000368291 SHC3Q92529 594 aa23.66■■□□□ 1.38
ECHDC1-203ENST00000368291 FAM81BQ96LP2 452 aa23.66■■□□□ 1.38
ECHDC1-203ENST00000368291 OSER1Q9NX31 292 aa23.66■■□□□ 1.38
ECHDC1-203ENST00000368291 LIMA1Q9UHB6 759 aaKnown RBP23.66■■□□□ 1.38
ECHDC1-203ENST00000368291 DNAJC12Q9UKB3 198 aa23.66■■□□□ 1.38
ECHDC1-203ENST00000368291 ARHGAP26Q9UNA1 814 aa23.66■■□□□ 1.38
ECHDC1-203ENST00000368291 PES1O00541 588 aaKnown RBP23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 XPO1O14980 1071 aaKnown RBP23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 COCHO43405 550 aa23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 LETM1O95202 739 aaPredicted RBP23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 TCF3P15923 654 aa23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 ARHGAP29Q52LW3 1261 aa23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 APTXQ7Z2E3 356 aaKnown RBP23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 DDX23Q9BUQ8 820 aaKnown RBP23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 MFSD1Q9H3U5 465 aa23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 CCSER2Q9H7U1 834 aa23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 TBC1D17Q9HA65 648 aa23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 NMUR1Q9HB89 426 aa23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 ACP6Q9NPH0 428 aa23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 HESX1Q9UBX0 185 aa23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 GABBR2O75899 941 aa23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 TUBP50607 506 aa23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 PDE6CP51160 858 aa23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 COPB1P53618 953 aaKnown RBP23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 PRKCQQ04759 706 aa23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 CCDC186Q7Z3E2 898 aa23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 FLCNQ8NFG4 579 aa23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 SH3RF2Q8TEC5 729 aa23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 SLC35F5Q8WV83 523 aa23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 FAM83CQ9BQN1 747 aa23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 NAT10Q9H0A0 1025 aaKnown RBP23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 TLR8Q9NR97 1041 aaKnown RBP23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 GKN1Q9NS71 199 aa23.65■■□□□ 1.38
ECHDC1-203ENST00000368291 MYOFQ9NZM1 2061 aa23.64■■□□□ 1.37
ECHDC1-203ENST00000368291 LRRC10BA6NIK2 292 aa23.64■■□□□ 1.37
ECHDC1-203ENST00000368291 PI15O43692 258 aa23.64■■□□□ 1.37
ECHDC1-203ENST00000368291 ATP1A3P13637 1013 aa23.64■■□□□ 1.37
ECHDC1-203ENST00000368291 AVPR2P30518 371 aa23.64■■□□□ 1.37
ECHDC1-203ENST00000368291 PLA2G4AP47712 749 aa23.64■■□□□ 1.37
ECHDC1-203ENST00000368291 STILQ15468 1287 aa23.64■■□□□ 1.37
ECHDC1-203ENST00000368291 HECTD3Q5T447 861 aa23.64■■□□□ 1.37
ECHDC1-203ENST00000368291 KLHDC7AQ5VTJ3 777 aa23.64■■□□□ 1.37
ECHDC1-203ENST00000368291 SCD5Q86SK9 330 aa23.64■■□□□ 1.37
ECHDC1-203ENST00000368291 SUGP1Q8IWZ8 645 aaKnown RBP23.64■■□□□ 1.37
ECHDC1-203ENST00000368291 ZFRQ96KR1 1074 aaKnown RBP23.64■■□□□ 1.37
ECHDC1-203ENST00000368291 A0A1W2PQH9 124 aa23.63■■□□□ 1.37
ECHDC1-203ENST00000368291 SETSIPP0DME0 302 aa23.63■■□□□ 1.37
ECHDC1-203ENST00000368291 KLK7P49862 253 aa23.63■■□□□ 1.37
ECHDC1-203ENST00000368291 ZNF165P49910 485 aa23.63■■□□□ 1.37
ECHDC1-203ENST00000368291 CLCN5P51795 746 aa23.63■■□□□ 1.37
ECHDC1-203ENST00000368291 SLC8A3P57103 927 aa23.63■■□□□ 1.37
ECHDC1-203ENST00000368291 TNK2Q07912 1038 aa23.63■■□□□ 1.37
ECHDC1-203ENST00000368291 MTF1Q14872 753 aa23.63■■□□□ 1.37
ECHDC1-203ENST00000368291 IQCB1Q15051 598 aa23.63■■□□□ 1.37
ECHDC1-203ENST00000368291 ASTLQ6HA08 431 aaPredicted RBP23.63■■□□□ 1.37
ECHDC1-203ENST00000368291 TPRG1Q6ZUI0 275 aa23.63■■□□□ 1.37
ECHDC1-203ENST00000368291 TMEM105Q8N8V8 129 aa23.63■■□□□ 1.37
ECHDC1-203ENST00000368291 LSM14BQ9BX40 385 aaKnown RBP23.63■■□□□ 1.37
ECHDC1-203ENST00000368291 NAA15Q9BXJ9 866 aaKnown RBP23.63■■□□□ 1.37
ECHDC1-203ENST00000368291 CYLDQ9NQC7 956 aa23.63■■□□□ 1.37
ECHDC1-203ENST00000368291 HPS4Q9NQG7 708 aa23.63■■□□□ 1.37
ECHDC1-203ENST00000368291 THG1LQ9NWX6 298 aaKnown RBP23.63■■□□□ 1.37
ECHDC1-203ENST00000368291 GTSE1Q9NYZ3 720 aa23.63■■□□□ 1.37
ECHDC1-203ENST00000368291 FHOD1Q9Y613 1164 aa23.63■■□□□ 1.37
ECHDC1-203ENST00000368291 CPQQ9Y646 472 aa23.63■■□□□ 1.37
ECHDC1-203ENST00000368291 LEFTY2O00292 366 aa23.62■■□□□ 1.37
ECHDC1-203ENST00000368291 FOXN3O00409 490 aaPredicted RBP23.62■■□□□ 1.37
ECHDC1-203ENST00000368291 TLR5O60602 858 aa23.62■■□□□ 1.37
ECHDC1-203ENST00000368291 PNMA6AP0CW24 399 aaPredicted RBP23.62■■□□□ 1.37
ECHDC1-203ENST00000368291 AOC1P19801 751 aa23.62■■□□□ 1.37
ECHDC1-203ENST00000368291 CD72P21854 359 aa23.62■■□□□ 1.37
ECHDC1-203ENST00000368291 TKTL1P51854 596 aa23.62■■□□□ 1.37
ECHDC1-203ENST00000368291 PLCB2Q00722 1185 aa23.62■■□□□ 1.37
ECHDC1-203ENST00000368291 SKOR2Q2VWA4 1001 aaPredicted RBP23.62■■□□□ 1.37
ECHDC1-203ENST00000368291 TRIM68Q6AZZ1 485 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms