RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 NUP107P57740 925 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 EFTUD2Q15029 972 aaKnown RBP eCLIP13.74□□□□□ -0.21
PTPRK-204ENST00000368210 ELMSAN1Q6PJG2 1045 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 WDR59Q6PJI9 974 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 BTNL9Q6UXG8 535 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 VSIG10LQ86VR7 867 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 DCP1BQ8IZD4 617 aaKnown RBP13.74□□□□□ -0.21
PTPRK-204ENST00000368210 SIX5Q8N196 739 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 HMBSP08397 361 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 ACO1P21399 889 aaKnown RBP13.74□□□□□ -0.21
PTPRK-204ENST00000368210 DEFA1P59665 94 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 DEFA3P59666 94 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 DNAJC3Q13217 504 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 TRIP10Q15642 601 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 TTC39BQ5VTQ0 682 aaPredicted RBP13.74□□□□□ -0.21
PTPRK-204ENST00000368210 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.74□□□□□ -0.21
PTPRK-204ENST00000368210 GIPC2Q8TF65 315 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 TFB1MQ8WVM0 346 aaKnown RBP13.74□□□□□ -0.21
PTPRK-204ENST00000368210 PAWRQ96IZ0 340 aaKnown RBP13.74□□□□□ -0.21
PTPRK-204ENST00000368210 P2RX7Q99572 595 aaKnown RBP13.74□□□□□ -0.21
PTPRK-204ENST00000368210 ATAD3AQ9NVI7 634 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 LMCD1Q9NZU5 365 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 STX18Q9P2W9 335 aaKnown RBP13.74□□□□□ -0.21
PTPRK-204ENST00000368210 PPME1Q9Y570 386 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 PCDHGC5Q9Y5F6 944 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 SYCE1LA8MT33 242 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 TRIM49D1C9J1S8 452 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 B3GAT3O94766 335 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 EPHX2P34913 555 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 PTGER2P43116 358 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 GSCP56915 257 aaPredicted RBP13.74□□□□□ -0.21
PTPRK-204ENST00000368210 BTKQ06187 659 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 PDK2Q15119 407 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 TAS2R42Q7RTR8 314 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 C4orf32Q8N8J7 132 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 ELMO3Q96BJ8 720 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 ZNF669Q96BR6 464 aaPredicted RBP13.74□□□□□ -0.21
PTPRK-204ENST00000368210 MTBPQ96DY7 904 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 TMEM121Q9BTD3 319 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 WDR18Q9BV38 432 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 MKL2Q9ULH7 1088 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 GRID1Q9ULK0 1009 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 CAB39Q9Y376 341 aaPredicted RBP13.74□□□□□ -0.21
PTPRK-204ENST00000368210 A0A0U1RQJ8 604 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 NPM3O75607 178 aaKnown RBP13.74□□□□□ -0.21
PTPRK-204ENST00000368210 ENO1P06733 434 aaKnown RBP13.74□□□□□ -0.21
PTPRK-204ENST00000368210 NNMTP40261 264 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 MTTPP55157 894 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 MROH9Q5TGP6 573 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 LRRC34Q8IZ02 419 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 FAM172AQ8WUF8 416 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 CATSPERBQ9H7T0 1116 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 C20orf96Q9NUD7 363 aaPredicted RBP13.74□□□□□ -0.21
PTPRK-204ENST00000368210 COMMD3-BMI1R4GMX3 469 aa13.74□□□□□ -0.21
PTPRK-204ENST00000368210 CACNA1FO60840 1977 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 ANKRD63C9JTQ0 380 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 PPP3CAQ08209 521 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 PPIDQ08752 370 aaKnown RBP13.73□□□□□ -0.21
PTPRK-204ENST00000368210 ACTL9Q8TC94 416 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 WDR70Q9NW82 654 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 GALNT8Q9NY28 637 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 ZMYND8Q9ULU4 1186 aaPredicted RBP13.73□□□□□ -0.21
PTPRK-204ENST00000368210 USP18Q9UMW8 372 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 AP4S1Q9Y587 144 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 O00370 1275 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 CLPTM1O96005 669 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 PTPRAP18433 802 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 AARSP49588 968 aaKnown RBP eCLIP13.73□□□□□ -0.21
PTPRK-204ENST00000368210 ERVK-9P63128 1117 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 RFX8Q6ZV50 586 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 NOP9Q86U38 636 aaKnown RBP13.73□□□□□ -0.21
PTPRK-204ENST00000368210 VCPIP1Q96JH7 1222 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 EGFL8Q99944 293 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 FMN2Q9NZ56 1722 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 ZNF839A8K0R7 811 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 OR1G1P47890 313 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 BCAT1P54687 386 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 RAD51Q06609 339 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 LRRC36Q1X8D7 754 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 RXFP2Q8WXD0 754 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 GLIS2Q9BZE0 524 aaPredicted RBP13.73□□□□□ -0.21
PTPRK-204ENST00000368210 SEMA4AQ9H3S1 761 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 DIABLOQ9NR28 239 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 KRT82Q9NSB4 513 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 HACD3Q9P035 362 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 RNF103-CHMP3A0A140T963 221 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 PYGMP11217 842 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 RGS2P41220 211 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 KCNMA1Q12791 1236 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 ITGB3BPQ13352 177 aaPredicted RBP13.73□□□□□ -0.21
PTPRK-204ENST00000368210 ZNF554Q86TJ5 538 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 BRSK2Q8IWQ3 736 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 IPMKQ8NFU5 416 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 ETNPPLQ8TBG4 499 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 ABHD8Q96I13 439 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 ZBTB45Q96K62 511 aaPredicted RBP13.73□□□□□ -0.21
PTPRK-204ENST00000368210 ARHGEF38Q9NXL2 777 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 EURLQ9NYK6 297 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 TEKT2Q9UIF3 430 aa13.73□□□□□ -0.21
PTPRK-204ENST00000368210 H0Y626 953 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms