RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 TTC39BQ5VTQ0 682 aaPredicted RBP12.76□□□□□ -0.37
PTPRK-203ENST00000368207 KRT80Q6KB66 452 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 C4orf22Q6V702 233 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 RIBC1Q8N443 379 aaPredicted RBP12.76□□□□□ -0.37
PTPRK-203ENST00000368207 NCLNQ969V3 563 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 CELF6Q96J87 481 aaKnown RBP12.76□□□□□ -0.37
PTPRK-203ENST00000368207 TRIM54Q9BYV2 358 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 FRMD8Q9BZ67 464 aaPredicted RBP12.76□□□□□ -0.37
PTPRK-203ENST00000368207 DCLK3Q9C098 648 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 SLC12A8A0AV02 714 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 SLC2A3P11169 496 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 CCDC130P13994 396 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 DNAJB2P25686 324 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 VCPP55072 806 aaKnown RBP12.76□□□□□ -0.37
PTPRK-203ENST00000368207 OVGP1Q12889 678 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 LBRQ14739 615 aaKnown RBP12.76□□□□□ -0.37
PTPRK-203ENST00000368207 SZRD1Q7Z422 152 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 GPR142Q7Z601 462 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 ZSWIM2Q8NEG5 633 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 BLOC1S5Q8TDH9 187 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 SNX19Q92543 992 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 SEPT8Q92599 483 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 DYRK4Q9NR20 520 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 IRAK4Q9NWZ3 460 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 MIPP30301 263 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 FDFT1P37268 417 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 RPL21P46778 160 aaKnown RBP12.76□□□□□ -0.37
PTPRK-203ENST00000368207 YWHAZP63104 245 aaKnown RBP12.76□□□□□ -0.37
PTPRK-203ENST00000368207 DENND1BQ6P3S1 775 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 LRRC43Q8N309 656 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 SHCBP1Q8NEM2 672 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 AVENQ9NQS1 362 aaPredicted RBP12.76□□□□□ -0.37
PTPRK-203ENST00000368207 CHST7Q9NS84 486 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 GRID1Q9ULK0 1009 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 IGKV6D-41A0A0C4DH26 115 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 FAM107AO95990 144 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 CKMP06732 381 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 AKT1P31749 480 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 NFE2Q16621 373 aaPredicted RBP12.76□□□□□ -0.37
PTPRK-203ENST00000368207 KCTD19Q17RG1 926 aaPredicted RBP12.76□□□□□ -0.37
PTPRK-203ENST00000368207 TTC23LQ6PF05 361 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 RGS9BPQ6ZS82 235 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 LRRC34Q8IZ02 419 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 ARHGAP18Q8N392 663 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 SHC3Q92529 594 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 C10orf88Q9H8K7 445 aa12.76□□□□□ -0.37
PTPRK-203ENST00000368207 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.76□□□□□ -0.37
PTPRK-203ENST00000368207 ANXA9O76027 345 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 FBXO21O94952 628 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 PAEPP09466 180 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 RBBP7Q16576 425 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 ZACNQ401N2 412 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 FAM71AQ8IYT1 594 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 DEFB106AQ8N104 65 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 GPR63Q9BZJ6 419 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 FAM129AQ9BZQ8 928 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 DRC3Q9H069 523 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 DNPEPQ9ULA0 475 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 TNFSF13BQ9Y275 285 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 H0Y626 953 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 ALDH2P05091 517 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 SLC11A2P49281 568 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 BMT2Q1RMZ1 405 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 LBX2Q6XYB7 198 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 DCUN1D1Q96GG9 259 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 ACO2Q99798 780 aaKnown RBP12.75□□□□□ -0.37
PTPRK-203ENST00000368207 ADAM2Q99965 735 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 PIH1D1Q9NWS0 290 aaKnown RBP12.75□□□□□ -0.37
PTPRK-203ENST00000368207 ATP11BQ9Y2G3 1177 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.75□□□□□ -0.37
PTPRK-203ENST00000368207 CHUKO15111 745 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 ANP32DO95626 131 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 AMPD1P23109 780 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 CDH18Q13634 790 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 CHI3L2Q15782 390 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 ZNF280DQ6N043 979 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 SRLQ86TD4 932 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 ARID3BQ8IVW6 561 aaPredicted RBP12.75□□□□□ -0.37
PTPRK-203ENST00000368207 E2F7Q96AV8 911 aa12.75□□□□□ -0.37
PTPRK-203ENST00000368207 ESRRBO95718 433 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 MYL2P10916 166 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 PGM1P36871 562 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 ST8SIA6P61647 398 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 DAB2IPQ5VWQ8 1189 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 C3orf20Q8ND61 904 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 SLC26A7Q8TE54 656 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 PBXIP1Q96AQ6 731 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 TSPAN17Q96FV3 270 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 FRMD8P1Q9BZ68 369 aaPredicted RBP12.74□□□□□ -0.37
PTPRK-203ENST00000368207 TMBIM4Q9HC24 238 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 NUDT5Q9UKK9 219 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 DSEQ9UL01 958 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 RAB21Q9UL25 225 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 NRCAMQ92823 1304 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.74□□□□□ -0.37
PTPRK-203ENST00000368207 SDR42E2A6NKP2 422 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 KCNK1O00180 336 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 FARP2O94887 1054 aaPredicted RBP12.74□□□□□ -0.37
PTPRK-203ENST00000368207 ASMTLO95671 621 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 MARCKSL1P49006 195 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms