RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 SH2D5Q6ZV89 423 aa14.16□□□□□ -0.14
PRKN-205ENST00000366897 SMC1BQ8NDV3 1235 aa14.16□□□□□ -0.14
PRKN-205ENST00000366897 SPATA18Q8TC71 538 aa14.16□□□□□ -0.14
PRKN-205ENST00000366897 CYP26B1Q9NR63 512 aa14.16□□□□□ -0.14
PRKN-205ENST00000366897 PXMP2Q9NR77 195 aa14.16□□□□□ -0.14
PRKN-205ENST00000366897 CNTN3Q9P232 1028 aa14.16□□□□□ -0.14
PRKN-205ENST00000366897 ZNF70Q9UC06 446 aaPredicted RBP14.16□□□□□ -0.14
PRKN-205ENST00000366897 CYTH4Q9UIA0 394 aa14.16□□□□□ -0.14
PRKN-205ENST00000366897 F5H423 210 aaPredicted RBP14.16□□□□□ -0.14
PRKN-205ENST00000366897 RNASEH1O60930 286 aaKnown RBP14.16□□□□□ -0.14
PRKN-205ENST00000366897 STAM2O75886 525 aa14.16□□□□□ -0.14
PRKN-205ENST00000366897 RTN3O95197 1032 aaPredicted RBP14.16□□□□□ -0.14
PRKN-205ENST00000366897 GSTT1P30711 240 aa14.16□□□□□ -0.14
PRKN-205ENST00000366897 RTP1P59025 263 aa14.16□□□□□ -0.14
PRKN-205ENST00000366897 SLC25A3Q00325 362 aa14.16□□□□□ -0.14
PRKN-205ENST00000366897 SLC25A11Q02978 314 aaKnown RBP14.16□□□□□ -0.14
PRKN-205ENST00000366897 DPYSL3Q14195 570 aa14.16□□□□□ -0.14
PRKN-205ENST00000366897 SH3PXD2AQ5TCZ1 1133 aa14.16□□□□□ -0.14
PRKN-205ENST00000366897 DPH6Q7L8W6 267 aa14.16□□□□□ -0.14
PRKN-205ENST00000366897 NIPA1Q7RTP0 329 aa14.16□□□□□ -0.14
PRKN-205ENST00000366897 KCTD6Q8NC69 237 aa14.16□□□□□ -0.14
PRKN-205ENST00000366897 SLC44A1Q8WWI5 657 aa14.16□□□□□ -0.14
PRKN-205ENST00000366897 ALKBH8Q96BT7 664 aaKnown RBP14.16□□□□□ -0.14
PRKN-205ENST00000366897 EBF3Q9H4W6 596 aa14.16□□□□□ -0.14
PRKN-205ENST00000366897 OCEL1Q9H607 264 aa14.16□□□□□ -0.14
PRKN-205ENST00000366897 CISHQ9NSE2 258 aa14.16□□□□□ -0.14
PRKN-205ENST00000366897 ZNF212Q9UDV6 495 aa14.16□□□□□ -0.14
PRKN-205ENST00000366897 E7ESA3 106 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 CALB1P05937 261 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 KDELR1P24390 212 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 EPHB1P54762 984 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 MCCD1P59942 119 aaPredicted RBP14.15□□□□□ -0.14
PRKN-205ENST00000366897 CDC16Q13042 620 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 PEX6Q13608 980 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 C1orf228Q6PIY5 440 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.15□□□□□ -0.14
PRKN-205ENST00000366897 TMEM35BQ8NCS4 154 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 NDE1Q9NXR1 346 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 COL4A5P29400 1685 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 ARHGAP42A6NI28 874 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 I3L4J1 428 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 K7ERI5 159 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 RNF8O76064 485 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 PDE5AO76074 875 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 STK10O94804 968 aaKnown RBP14.15□□□□□ -0.14
PRKN-205ENST00000366897 C6orf222P0C671 652 aaPredicted RBP14.15□□□□□ -0.14
PRKN-205ENST00000366897 KRT3P12035 628 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 OSTNP61366 133 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 CLDN10P78369 228 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 MRPS5P82675 430 aaKnown RBP14.15□□□□□ -0.14
PRKN-205ENST00000366897 PIGHQ14442 188 aaPredicted RBP14.15□□□□□ -0.14
PRKN-205ENST00000366897 KRT72Q14CN4 511 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 DLGAP5Q15398 846 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 LRRC38Q5VT99 294 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 LPCAT4Q643R3 524 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 DARS2Q6PI48 645 aaKnown RBP14.15□□□□□ -0.14
PRKN-205ENST00000366897 MTHFD1LQ6UB35 978 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 PCGF5Q86SE9 256 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 CDR2LQ86X02 465 aaPredicted RBP14.15□□□□□ -0.14
PRKN-205ENST00000366897 MTBPQ96DY7 904 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 TCHPQ9BT92 498 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 ASCC2Q9H1I8 757 aaPredicted RBP14.15□□□□□ -0.14
PRKN-205ENST00000366897 NXF1Q9UBU9 619 aaKnown RBP14.15□□□□□ -0.14
PRKN-205ENST00000366897 LOXHD1Q8IVV2 1947 aa14.15□□□□□ -0.14
PRKN-205ENST00000366897 CAPN14A8MX76 684 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 FZD9O00144 591 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 LYPLA1O75608 230 aaPredicted RBP14.14□□□□□ -0.15
PRKN-205ENST00000366897 SFNP31947 248 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 EMC2Q15006 297 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 ZRSR2Q15696 482 aaKnown RBP14.14□□□□□ -0.15
PRKN-205ENST00000366897 RALGPS1Q5JS13 557 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 MROH9Q5TGP6 573 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 BBS12Q6ZW61 710 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 CHSY1Q86X52 802 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 MCF2L2Q86YR7 1114 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 FAF2Q96CS3 445 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 ECSITQ9BQ95 431 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 TUBB6Q9BUF5 446 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 IMPG2Q9BZV3 1241 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 PPCSQ9HAB8 311 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 SMYD2Q9NRG4 433 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 RAB6BQ9NRW1 208 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 SLC17A6Q9P2U8 582 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 ANKRD33BA6NCL7 494 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 CIB2O75838 187 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 DGAT1O75907 488 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 SPATA31D3P0C874 917 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 GMPRP36959 345 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 PSMC1P62191 440 aaKnown RBP14.14□□□□□ -0.15
PRKN-205ENST00000366897 DSG1Q02413 1049 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 SLC18A2Q05940 514 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 SPATA31D4Q6ZUB0 917 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 TMPRSS6Q8IU80 811 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 DEPTORQ8TB45 409 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 E2F7Q96AV8 911 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 APOL6Q9BWW8 343 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 CYP4F11Q9HBI6 524 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 DDX56Q9NY93 547 aaKnown RBP14.14□□□□□ -0.15
PRKN-205ENST00000366897 ANGPTL2Q9UKU9 493 aa14.14□□□□□ -0.15
PRKN-205ENST00000366897 CTDP1Q9Y5B0 961 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms