RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 XIAPP98170 497 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 NOTUMQ6P988 496 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 TTC33Q6PID6 262 aaPredicted RBP12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 RFX8Q6ZV50 586 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 AAR2Q9Y312 384 aaKnown RBP12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 MYO1DO94832 1006 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 EPC2Q52LR7 807 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 RBBP8Q99708 897 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 ABCF3Q9NUQ8 709 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 SNX9Q9Y5X1 595 aa12.21□□□□□ -0.45
CDC42BPA-202ENST00000366764 ERI2A8K979 691 aaKnown RBP12.21□□□□□ -0.46
CDC42BPA-202ENST00000366764 LCP1P13796 627 aa12.21□□□□□ -0.46
CDC42BPA-202ENST00000366764 MAPRE1Q15691 268 aaKnown RBP12.21□□□□□ -0.46
CDC42BPA-202ENST00000366764 LRRC36Q1X8D7 754 aa12.21□□□□□ -0.46
CDC42BPA-202ENST00000366764 IZUMO2Q6UXV1 221 aa12.21□□□□□ -0.46
CDC42BPA-202ENST00000366764 GPR141Q7Z602 305 aa12.21□□□□□ -0.46
CDC42BPA-202ENST00000366764 FAM9CQ8IZT9 166 aa12.21□□□□□ -0.46
CDC42BPA-202ENST00000366764 ASTN1O14525 1302 aa12.21□□□□□ -0.46
CDC42BPA-202ENST00000366764 CROCCQ5TZA2 2017 aa12.21□□□□□ -0.46
CDC42BPA-202ENST00000366764 PRRC2BQ5JSZ5 2229 aaKnown RBP12.21□□□□□ -0.46
CDC42BPA-202ENST00000366764 CYP4A22Q5TCH4 519 aa12.21□□□□□ -0.46
CDC42BPA-202ENST00000366764 HGSNATQ68CP4 663 aa12.21□□□□□ -0.46
CDC42BPA-202ENST00000366764 MAP4K3Q8IVH8 894 aa12.21□□□□□ -0.46
CDC42BPA-202ENST00000366764 EFHBQ8N7U6 833 aa12.21□□□□□ -0.46
CDC42BPA-202ENST00000366764 KLF6Q99612 283 aaPredicted RBP12.21□□□□□ -0.46
CDC42BPA-202ENST00000366764 SCHIP1Q9P0W5 487 aaPredicted RBP12.21□□□□□ -0.46
CDC42BPA-202ENST00000366764 SUPT20HL2P0C7V6 817 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 PRKAA1Q13131 559 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 C12orf56Q8IXR9 622 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 IDI2Q9BXS1 227 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 C2CD2LO14523 706 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 AHCYL1O43865 530 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 TCP10LQ8TDR4 215 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 NAV1Q8NEY1 1877 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 RBP1P09455 135 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 RALBP11234 206 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 CYP2C9P11712 490 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 PECAM1P16284 738 aaPredicted RBP12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 BTBD8Q5XKL5 378 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 NET1Q7Z628 596 aaPredicted RBP12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 NOP9Q86U38 636 aaKnown RBP12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 DDX50Q9BQ39 737 aaKnown RBP12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 TCF7L2Q9NQB0 619 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 HACD1B0YJ81 288 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 ATP6V1C1P21283 382 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 OVGP1Q12889 678 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 CCDC33Q8N5R6 958 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 FAM118BQ9BPY3 351 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 SLC22A9Q8IVM8 553 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 MTMR12Q9C0I1 747 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 ACSS3Q9H6R3 686 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 SLC13A4Q9UKG4 626 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 MAP1BP46821 2468 aaKnown RBP12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 DFFAO00273 331 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 RGS2P41220 211 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 PTPN11Q06124 597 aaPredicted RBP12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 MPZL3Q6UWV2 235 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.2□□□□□ -0.463e-6■■■■■ 34.1
CDC42BPA-202ENST00000366764 RRN3Q9NYV6 651 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 SLC39A10Q9ULF5 831 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 BIRC5O15392 142 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 MPOP05164 745 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 HOXA10P31260 410 aaPredicted RBP12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 OPTNQ96CV9 577 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 ATXN7L3BQ96GX2 97 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 SLC8A2Q9UPR5 921 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 SPATA31A6Q5VVP1 1343 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 ZBBXA8MT70 800 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 RPLP2P05387 115 aaKnown RBP12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 GOLGA7BQ2TAP0 167 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 CYGBQ8WWM9 190 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 ZNF408Q9H9D4 720 aa12.2□□□□□ -0.46
CDC42BPA-202ENST00000366764 CAP2P40123 477 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 SLC44A4Q53GD3 710 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 GJD4Q96KN9 370 aaPredicted RBP12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 AKAP11Q9UKA4 1901 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 ZMYM2Q9UBW7 1377 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 RRN3P2A6NIE6 340 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 GNL1P36915 607 aaPredicted RBP12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 ZNF606Q8WXB4 792 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 IRAK4Q9NWZ3 460 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 ITGA11Q9UKX5 1188 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 TXNP10599 105 aaKnown RBP12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 NUDT12Q9BQG2 462 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 EFR3BQ9Y2G0 817 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 HMGCRP04035 888 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 LRRC57Q8N9N7 239 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 MCM8Q9UJA3 840 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 S100A5P33763 92 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 GRM1Q13255 1194 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 LAMC2Q13753 1193 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 C4orf50Q6ZRC1 276 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 LRP10Q7Z4F1 713 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 C12orf50Q8NA57 414 aaPredicted RBP12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 AGBL1Q96MI9 1066 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 OPLAHO14841 1288 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 HOXB8P17481 243 aaPredicted RBP12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 EPHB2P29323 1055 aa12.19□□□□□ -0.46
CDC42BPA-202ENST00000366764 TKTP29401 623 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms