RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 SPDYCQ5MJ68 293 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 SLC23A3Q6PIS1 610 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 KRBA2Q6ZNG9 492 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 C4orf50Q6ZRC1 276 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 STXBP4Q6ZWJ1 553 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 CBWD2Q8IUF1 395 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 GPD1LQ8N335 351 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 CCDC33Q8N5R6 958 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 IL17RCQ8NAC3 791 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 KIAA0895Q8NCT3 520 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 DEFB124Q8NES8 71 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 KBTBD7Q8WVZ9 684 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 PIGKQ92643 395 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 MYLPFQ96A32 169 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 FNBP1Q96RU3 617 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 PDE11AQ9HCR9 933 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 CRTAC1Q9NQ79 661 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 RBAKQ9NYW8 714 aaPredicted RBP12.44□□□□□ -0.42
MRPL55-213ENST00000366740 CDH9Q9ULB4 789 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 ANKRD11Q6UB99 2663 aaPredicted RBP12.44□□□□□ -0.42
MRPL55-213ENST00000366740 ITPR1Q14643 2758 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 UPK3BL1B0FP48 263 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 UPK3BL2E5RIL1 263 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 SGK1O00141 431 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 ATP2C2O75185 946 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 ALDH1A2O94788 518 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 OAS1P00973 400 aaKnown RBP12.43□□□□□ -0.42
MRPL55-213ENST00000366740 DPP6P42658 865 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 KIR2DL1P43626 348 aaPredicted RBP12.43□□□□□ -0.42
MRPL55-213ENST00000366740 USP46P62068 366 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 NOP14P78316 857 aaKnown RBP12.43□□□□□ -0.42
MRPL55-213ENST00000366740 RBP5P82980 135 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 MESP2Q0VG99 397 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 DPYDQ12882 1025 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 UAP1L1Q3KQV9 507 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 DENND5BQ6ZUT9 1274 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 LPCAT2Q7L5N7 544 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 FILIP1Q7Z7B0 1213 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 PIP4P1Q86T03 277 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 SYT12Q8IV01 421 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 SFTPA1Q8IWL2 248 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 ADGRG2Q8IZP9 1017 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 CSGALNACT2Q8N6G5 542 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 ALLCQ8N6M5 410 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 TXNDC5Q8NBS9 432 aaKnown RBP12.43□□□□□ -0.42
MRPL55-213ENST00000366740 ENGASEQ8NFI3 743 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 WHAMMQ8TF30 809 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 NOC3LQ8WTT2 800 aaKnown RBP12.43□□□□□ -0.42
MRPL55-213ENST00000366740 ZCCHC14Q8WYQ9 949 aaKnown RBP12.43□□□□□ -0.42
MRPL55-213ENST00000366740 SPACA7Q96KW9 195 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 SYT15Q9BQS2 421 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 NUSAP1Q9BXS6 441 aaKnown RBP12.43□□□□□ -0.42
MRPL55-213ENST00000366740 MTMR12Q9C0I1 747 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 RNF38Q9H0F5 515 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 AGPAT3Q9NRZ7 376 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 TMEM74BQ9NUR3 256 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 HSPBP1Q9NZL4 362 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 TRPM5Q9NZQ8 1165 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 MAGEC2Q9UBF1 373 aaPredicted RBP12.43□□□□□ -0.42
MRPL55-213ENST00000366740 MBD1Q9UIS9 605 aaPredicted RBP12.43□□□□□ -0.42
MRPL55-213ENST00000366740 SHROOM3Q8TF72 1996 aa12.43□□□□□ -0.42
MRPL55-213ENST00000366740 PTPRJQ12913 1337 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 ZNF840PA6NDX5 716 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 TULP1O00294 542 aaPredicted RBP12.42□□□□□ -0.42
MRPL55-213ENST00000366740 SLC9A3R1O14745 358 aaPredicted RBP12.42□□□□□ -0.42
MRPL55-213ENST00000366740 KAT7O95251 611 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 RPN1P04843 607 aaKnown RBP12.42□□□□□ -0.42
MRPL55-213ENST00000366740 KRT19P08727 400 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 TMEM191BP0C7N4 346 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 ENGP17813 658 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 BDNFP23560 247 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 LMO2P25791 158 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 HOXD12P35452 270 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 PTGER3P43115 390 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 PPP3CCP48454 512 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 PSMC1P62191 440 aaKnown RBP12.42□□□□□ -0.42
MRPL55-213ENST00000366740 SEMA3BQ13214 749 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 DHCR24Q15392 516 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 MAPRE1Q15691 268 aaKnown RBP12.42□□□□□ -0.42
MRPL55-213ENST00000366740 KNOP1Q1ED39 458 aaKnown RBP12.42□□□□□ -0.42
MRPL55-213ENST00000366740 MAP7D1Q3KQU3 841 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 LMBRD2Q68DH5 695 aaPredicted RBP12.42□□□□□ -0.42
MRPL55-213ENST00000366740 C12orf40Q86WS4 652 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 FMR1NBQ8N0W7 255 aaPredicted RBP12.42□□□□□ -0.42
MRPL55-213ENST00000366740 PHTF2Q8N3S3 785 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 FRMD1Q8N878 549 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 RDH13Q8NBN7 331 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 OR5B17Q8NGF7 314 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 RLN3Q8WXF3 142 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 PNKPQ96T60 521 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 SLC32A1Q9H598 525 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 POLMQ9NP87 494 aaPredicted RBP12.42□□□□□ -0.42
MRPL55-213ENST00000366740 INTS13Q9NVM9 706 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 EHD2Q9NZN4 543 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 PILRBQ9UKJ0 227 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 MSRB2Q9Y3D2 182 aa12.42□□□□□ -0.42
MRPL55-213ENST00000366740 UBE4BO95155 1302 aa12.41□□□□□ -0.42
MRPL55-213ENST00000366740 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.41□□□□□ -0.42
MRPL55-213ENST00000366740 FAM221BA6H8Z2 402 aa12.41□□□□□ -0.42
MRPL55-213ENST00000366740 TRIM66O15016 1216 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms