RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 TMEM120AQ9BXJ8 343 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 ROGDIQ9GZN7 287 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 MAN1C1Q9NR34 630 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 VTI1BQ9UEU0 232 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 DNAJC16Q9Y2G8 782 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 TAF4O00268 1085 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 FOXN1O15353 648 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 CLOCKO15516 846 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 CYP2D6P10635 497 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 PSMD4P55036 377 aaKnown RBP17.29■□□□□ 0.36
NID1-202ENST00000366595 PDK2Q15119 407 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 PDPK2PQ6A1A2 396 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 SLC26A11Q86WA9 606 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 CINPQ9BW66 212 aaPredicted RBP17.29■□□□□ 0.36
NID1-202ENST00000366595 ASAP1Q9ULH1 1129 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 PIN4Q9Y237 131 aaKnown RBP17.29■□□□□ 0.36
NID1-202ENST00000366595 PZPP20742 1482 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 CD3EAPO15446 510 aaKnown RBP17.29■□□□□ 0.36
NID1-202ENST00000366595 RGS20O76081 388 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 MYL12AP19105 171 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 TIGD7Q6NT04 549 aaPredicted RBP17.29■□□□□ 0.36
NID1-202ENST00000366595 CCDC80Q76M96 950 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 NOA1Q8NC60 698 aaKnown RBP17.29■□□□□ 0.36
NID1-202ENST00000366595 C9orf16Q9BUW7 83 aa17.29■□□□□ 0.36
NID1-202ENST00000366595 PNMA8BQ9ULN7 279 aaPredicted RBP17.29■□□□□ 0.36
NID1-202ENST00000366595 RUVBL2Q9Y230 463 aaKnown RBP17.29■□□□□ 0.36
NID1-202ENST00000366595 C15orf38-AP3S2A0A0A6YYH1 394 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 PNPLA4P41247 253 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 PUDPQ08623 228 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 TKFCQ3LXA3 575 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 ZNF438Q7Z4V0 828 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 ARPINQ7Z6K5 226 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 UGT2B28Q9BY64 529 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 TMEM114B3SHH9 223 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 LDLRP01130 860 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 HARS2P49590 506 aaKnown RBP17.28■□□□□ 0.36
NID1-202ENST00000366595 SFSWAPQ12872 951 aaKnown RBP17.28■□□□□ 0.36
NID1-202ENST00000366595 TOP3AQ13472 1001 aaPredicted RBP17.28■□□□□ 0.36
NID1-202ENST00000366595 SIRT2Q8IXJ6 389 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 CACTIN-AS1Q8N1I8 211 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 ATP6V0D2Q8N8Y2 350 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 MASTLQ96GX5 879 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 BTBD3Q9Y2F9 522 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 ALOX12P18054 663 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 SNX30Q5VWJ9 437 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 MZT2AQ6P582 158 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 CHSY1Q86X52 802 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 ARHGEF19Q8IW93 802 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 CASKIN2Q8WXE0 1202 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 L3MBTL3Q96JM7 780 aaPredicted RBP17.28■□□□□ 0.36
NID1-202ENST00000366595 IARS2Q9NSE4 1012 aaKnown RBP17.28■□□□□ 0.36
NID1-202ENST00000366595 SH3BP1Q9Y3L3 701 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 UBDO15205 165 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 HLA-DRAP01903 254 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 PAICSP22234 425 aaKnown RBP17.28■□□□□ 0.36
NID1-202ENST00000366595 MAPKAPK2P49137 400 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 CAMK2GQ13555 558 aaPredicted RBP17.28■□□□□ 0.36
NID1-202ENST00000366595 KLHDC7AQ5VTJ3 777 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 LMBRD2Q68DH5 695 aaPredicted RBP17.28■□□□□ 0.36
NID1-202ENST00000366595 SGF29Q96ES7 293 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 SHCBP1LQ9BZQ2 653 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 KCTD10Q9H3F6 313 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 DYRK1BQ9Y463 629 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 PNPLA7Q6ZV29 1317 aa17.28■□□□□ 0.36
NID1-202ENST00000366595 NR5A2O00482 541 aa17.27■□□□□ 0.36
NID1-202ENST00000366595 KCNMA1Q12791 1236 aa17.27■□□□□ 0.36
NID1-202ENST00000366595 GSTA3Q16772 222 aa17.27■□□□□ 0.36
NID1-202ENST00000366595 CCDC153Q494R4 210 aa17.27■□□□□ 0.36
NID1-202ENST00000366595 TPCN2Q8NHX9 752 aa17.27■□□□□ 0.36
NID1-202ENST00000366595 UBASH3BQ8TF42 649 aa17.27■□□□□ 0.36
NID1-202ENST00000366595 KATNA1O75449 491 aa17.27■□□□□ 0.36
NID1-202ENST00000366595 YWHAQP27348 245 aa17.27■□□□□ 0.36
NID1-202ENST00000366595 SSTR3P32745 418 aaPredicted RBP17.27■□□□□ 0.36
NID1-202ENST00000366595 TTC27Q6P3X3 843 aa17.27■□□□□ 0.36
NID1-202ENST00000366595 C2orf69Q8N8R5 385 aa17.27■□□□□ 0.36
NID1-202ENST00000366595 RERGLQ9H628 205 aa17.27■□□□□ 0.36
NID1-202ENST00000366595 STN1Q9H668 368 aaKnown RBP17.27■□□□□ 0.36
NID1-202ENST00000366595 TRIM43BA6NCK2 446 aa17.27■□□□□ 0.36
NID1-202ENST00000366595 ANXA6P08133 673 aa17.27■□□□□ 0.36
NID1-202ENST00000366595 GRK3P35626 688 aa17.27■□□□□ 0.36
NID1-202ENST00000366595 IFNGR2P38484 337 aa17.27■□□□□ 0.36
NID1-202ENST00000366595 FMR1Q06787 632 aaKnown RBP eCLIP17.27■□□□□ 0.36
NID1-202ENST00000366595 ACAD10Q6JQN1 1059 aa17.27■□□□□ 0.36
NID1-202ENST00000366595 GPAT2Q6NUI2 795 aa17.27■□□□□ 0.36
NID1-202ENST00000366595 SLC25A24Q6NUK1 477 aa17.27■□□□□ 0.36
NID1-202ENST00000366595 CLVS1Q8IUQ0 354 aaPredicted RBP17.27■□□□□ 0.36
NID1-202ENST00000366595 UXS1Q8NBZ7 420 aa17.27■□□□□ 0.36
NID1-202ENST00000366595 CENPIQ92674 756 aaPredicted RBP17.27■□□□□ 0.36
NID1-202ENST00000366595 KATNAL1Q9BW62 490 aa17.27■□□□□ 0.36
NID1-202ENST00000366595 MYL12BO14950 172 aa17.27■□□□□ 0.35
NID1-202ENST00000366595 BMP10O95393 424 aa17.27■□□□□ 0.35
NID1-202ENST00000366595 KCNJ1P48048 391 aa17.27■□□□□ 0.35
NID1-202ENST00000366595 GALNTL6Q49A17 601 aa17.27■□□□□ 0.35
NID1-202ENST00000366595 FAM196AQ6ZSG2 479 aa17.27■□□□□ 0.35
NID1-202ENST00000366595 VN1R5Q7Z5H4 357 aa17.27■□□□□ 0.35
NID1-202ENST00000366595 MTDHQ86UE4 582 aaKnown RBP17.27■□□□□ 0.35
NID1-202ENST00000366595 ZCWPW1Q9H0M4 648 aa17.27■□□□□ 0.35
NID1-202ENST00000366595 L2HGDHQ9H9P8 463 aa17.27■□□□□ 0.35
NID1-202ENST00000366595 TRIM39Q9HCM9 518 aa17.27■□□□□ 0.35
NID1-202ENST00000366595 CRNNQ9UBG3 495 aaPredicted RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms