RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 RAB20Q9NX57 234 aa25.02■■□□□ 1.6
SHC1-201ENST00000366442 CPQQ9Y646 472 aa25.02■■□□□ 1.6
SHC1-201ENST00000366442 GPR179Q6PRD1 2367 aa25.02■■□□□ 1.6
SHC1-201ENST00000366442 BEST1O76090 585 aa25.01■■□□□ 1.59
SHC1-201ENST00000366442 NFATC1O95644 943 aa25.01■■□□□ 1.59
SHC1-201ENST00000366442 FAM200BP0CF97 657 aa25.01■■□□□ 1.59
SHC1-201ENST00000366442 DRD1P21728 446 aa25.01■■□□□ 1.59
SHC1-201ENST00000366442 PPP1R2P41236 205 aa25.01■■□□□ 1.59
SHC1-201ENST00000366442 PMS1P54277 932 aaKnown RBP25.01■■□□□ 1.59
SHC1-201ENST00000366442 STIM1Q13586 685 aa25.01■■□□□ 1.59
SHC1-201ENST00000366442 DDX42Q86XP3 938 aaKnown RBP eCLIP25.01■■□□□ 1.59
SHC1-201ENST00000366442 WHAMMQ8TF30 809 aa25.01■■□□□ 1.59
SHC1-201ENST00000366442 RUBCNQ92622 972 aa25.01■■□□□ 1.59
SHC1-201ENST00000366442 DHTKD1Q96HY7 919 aaPredicted RBP25.01■■□□□ 1.59
SHC1-201ENST00000366442 P2RY13Q9BPV8 354 aa25.01■■□□□ 1.59
SHC1-201ENST00000366442 LINC00597Q9H2U6 94 aa25.01■■□□□ 1.59
SHC1-201ENST00000366442 FBXO44Q9H4M3 255 aa25.01■■□□□ 1.59
SHC1-201ENST00000366442 MYH10P35580 1976 aa25■■□□□ 1.59
SHC1-201ENST00000366442 PSMA7O14818 248 aa25■■□□□ 1.59
SHC1-201ENST00000366442 CD58P19256 250 aa25■■□□□ 1.59
SHC1-201ENST00000366442 GALK1P51570 392 aa25■■□□□ 1.59
SHC1-201ENST00000366442 MAP3K7CLP57077 242 aa25■■□□□ 1.59
SHC1-201ENST00000366442 HECTD3Q5T447 861 aa25■■□□□ 1.59
SHC1-201ENST00000366442 CYFIP2Q96F07 1278 aa25■■□□□ 1.59
SHC1-201ENST00000366442 PNPLA8Q9NP80 782 aa25■■□□□ 1.59
SHC1-201ENST00000366442 CHORDC1Q9UHD1 332 aaPredicted RBP25■■□□□ 1.59
SHC1-201ENST00000366442 SPTBN4Q9H254 2564 aa25■■□□□ 1.59
SHC1-201ENST00000366442 K7ESF4 209 aa24.99■■□□□ 1.59
SHC1-201ENST00000366442 SLC9A3R1O14745 358 aaPredicted RBP24.99■■□□□ 1.59
SHC1-201ENST00000366442 MBL2P11226 248 aaPredicted RBP24.99■■□□□ 1.59
SHC1-201ENST00000366442 HOXA6P31267 233 aa24.99■■□□□ 1.59
SHC1-201ENST00000366442 FBXO43Q4G163 708 aa24.99■■□□□ 1.59
SHC1-201ENST00000366442 CLEC20AQ6ZU45 233 aa24.99■■□□□ 1.59
SHC1-201ENST00000366442 SMPD4Q9NXE4 827 aa24.99■■□□□ 1.59
SHC1-201ENST00000366442 MAN1B1Q9UKM7 699 aa24.99■■□□□ 1.59
SHC1-201ENST00000366442 COQ4Q9Y3A0 265 aa24.99■■□□□ 1.59
SHC1-201ENST00000366442 TRIM49BA6NDI0 452 aa24.98■■□□□ 1.59
SHC1-201ENST00000366442 COCHO43405 550 aa24.98■■□□□ 1.59
SHC1-201ENST00000366442 ATG13O75143 517 aa24.98■■□□□ 1.59
SHC1-201ENST00000366442 ADORA2BP29275 332 aa24.98■■□□□ 1.59
SHC1-201ENST00000366442 DCAF17Q5H9S7 520 aaPredicted RBP24.98■■□□□ 1.59
SHC1-201ENST00000366442 TCERG1LQ5VWI1 586 aa24.98■■□□□ 1.59
SHC1-201ENST00000366442 CD101Q93033 1021 aa24.98■■□□□ 1.59
SHC1-201ENST00000366442 FBRSL1Q9HCM7 1045 aaKnown RBP24.98■■□□□ 1.59
SHC1-201ENST00000366442 GMIPQ9P107 970 aa24.98■■□□□ 1.59
SHC1-201ENST00000366442 ARMCX3Q9UH62 379 aaPredicted RBP24.98■■□□□ 1.59
SHC1-201ENST00000366442 EGFP01133 1207 aa24.97■■□□□ 1.59
SHC1-201ENST00000366442 CBWD6Q4V339 395 aa24.97■■□□□ 1.59
SHC1-201ENST00000366442 CBWD3Q5JTY5 395 aa24.97■■□□□ 1.59
SHC1-201ENST00000366442 CBWD5Q5RIA9 395 aa24.97■■□□□ 1.59
SHC1-201ENST00000366442 FOXR2Q6PJQ5 311 aa24.97■■□□□ 1.59
SHC1-201ENST00000366442 FILIP1Q7Z7B0 1213 aa24.97■■□□□ 1.59
SHC1-201ENST00000366442 ADGRG2Q8IZP9 1017 aa24.97■■□□□ 1.59
SHC1-201ENST00000366442 ZFRQ96KR1 1074 aaKnown RBP24.97■■□□□ 1.59
SHC1-201ENST00000366442 CEP63Q96MT8 703 aa24.97■■□□□ 1.59
SHC1-201ENST00000366442 DUSP9Q99956 384 aaKnown RBP24.97■■□□□ 1.59
SHC1-201ENST00000366442 METTL14Q9HCE5 456 aaKnown RBP24.97■■□□□ 1.59
SHC1-201ENST00000366442 TLR8Q9NR97 1041 aaKnown RBP24.97■■□□□ 1.59
SHC1-201ENST00000366442 C2orf42Q9NWW7 574 aa24.97■■□□□ 1.59
SHC1-201ENST00000366442 CFAP97Q9P2B7 532 aa24.97■■□□□ 1.59
SHC1-201ENST00000366442 SMG5Q9UPR3 1016 aaKnown RBP24.97■■□□□ 1.59
SHC1-201ENST00000366442 SCML2Q9UQR0 700 aa24.97■■□□□ 1.59
SHC1-201ENST00000366442 E2F8A0AVK6 867 aa24.96■■□□□ 1.59
SHC1-201ENST00000366442 CHURC1-FNTBB4DL54 471 aa24.96■■□□□ 1.59
SHC1-201ENST00000366442 HHLA1C9JL84 531 aa24.96■■□□□ 1.59
SHC1-201ENST00000366442 NAIF1Q69YI7 327 aaPredicted RBP24.96■■□□□ 1.59
SHC1-201ENST00000366442 LONP2Q86WA8 852 aa24.96■■□□□ 1.59
SHC1-201ENST00000366442 SLC35C1Q96A29 364 aa24.96■■□□□ 1.59
SHC1-201ENST00000366442 HINFPQ9BQA5 517 aa24.96■■□□□ 1.59
SHC1-201ENST00000366442 CCSER2Q9H7U1 834 aa24.96■■□□□ 1.59
SHC1-201ENST00000366442 CISHQ9NSE2 258 aa24.96■■□□□ 1.59
SHC1-201ENST00000366442 TBC1D14Q9P2M4 693 aa24.96■■□□□ 1.59
SHC1-201ENST00000366442 RNF40O75150 1001 aa24.95■■□□□ 1.58
SHC1-201ENST00000366442 GADD45BO75293 160 aaPredicted RBP24.95■■□□□ 1.58
SHC1-201ENST00000366442 CD44P16070 742 aaKnown RBP24.95■■□□□ 1.58
SHC1-201ENST00000366442 CNR2P34972 360 aa24.95■■□□□ 1.58
SHC1-201ENST00000366442 ISM2Q6H9L7 571 aa24.95■■□□□ 1.58
SHC1-201ENST00000366442 GPRIN1Q7Z2K8 1008 aa24.95■■□□□ 1.58
SHC1-201ENST00000366442 CCDC26Q8TAB7 109 aa24.95■■□□□ 1.58
SHC1-201ENST00000366442 TATDN2Q93075 761 aa24.95■■□□□ 1.58
SHC1-201ENST00000366442 OTUB2Q96DC9 234 aa24.95■■□□□ 1.58
SHC1-201ENST00000366442 DUSP16Q9BY84 665 aa24.95■■□□□ 1.58
SHC1-201ENST00000366442 CYP17A1P05093 508 aa24.94■■□□□ 1.58
SHC1-201ENST00000366442 FNTBP49356 437 aa24.94■■□□□ 1.58
SHC1-201ENST00000366442 DMWDQ09019 674 aa24.94■■□□□ 1.58
SHC1-201ENST00000366442 MORC3Q14149 939 aa24.94■■□□□ 1.58
SHC1-201ENST00000366442 GAB4Q2WGN9 574 aa24.94■■□□□ 1.58
SHC1-201ENST00000366442 ZNF394Q53GI3 561 aa24.94■■□□□ 1.58
SHC1-201ENST00000366442 PPP1R26Q5T8A7 1209 aaPredicted RBP24.94■■□□□ 1.58
SHC1-201ENST00000366442 PKN3Q6P5Z2 889 aa24.94■■□□□ 1.58
SHC1-201ENST00000366442 SLC4A11Q8NBS3 891 aa24.94■■□□□ 1.58
SHC1-201ENST00000366442 SECISBP2LQ93073 1101 aaKnown RBP24.94■■□□□ 1.58
SHC1-201ENST00000366442 TMEM176AQ96HP8 235 aa24.94■■□□□ 1.58
SHC1-201ENST00000366442 HEXIM2Q96MH2 286 aaKnown RBP24.94■■□□□ 1.58
SHC1-201ENST00000366442 ARID3AQ99856 593 aa24.94■■□□□ 1.58
SHC1-201ENST00000366442 CYLDQ9NQC7 956 aa24.94■■□□□ 1.58
SHC1-201ENST00000366442 PPP1R3GB7ZBB8 358 aa24.93■■□□□ 1.58
SHC1-201ENST00000366442 PMM2O15305 246 aa24.93■■□□□ 1.58
SHC1-201ENST00000366442 TLR5O60602 858 aa24.93■■□□□ 1.58
SHC1-201ENST00000366442 BMP6P22004 513 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms