RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 LEFTY2O00292 366 aa10.96□□□□□ -0.65
YBX3-203ENST00000366286 CYP26A1O43174 497 aa10.96□□□□□ -0.65
YBX3-203ENST00000366286 MBL2P11226 248 aaPredicted RBP10.96□□□□□ -0.65
YBX3-203ENST00000366286 RAD23BP54727 409 aa10.96□□□□□ -0.65
YBX3-203ENST00000366286 CSTF1Q05048 431 aaKnown RBP10.96□□□□□ -0.65
YBX3-203ENST00000366286 CCINQ13939 588 aa10.96□□□□□ -0.65
YBX3-203ENST00000366286 GAS6Q14393 721 aa10.96□□□□□ -0.65
YBX3-203ENST00000366286 EML3Q32P44 896 aa10.96□□□□□ -0.65
YBX3-203ENST00000366286 PPP1R26Q5T8A7 1209 aaPredicted RBP10.96□□□□□ -0.65
YBX3-203ENST00000366286 TSSK4Q6SA08 328 aa10.96□□□□□ -0.65
YBX3-203ENST00000366286 Q6ZS52 159 aa10.96□□□□□ -0.65
YBX3-203ENST00000366286 FILIP1Q7Z7B0 1213 aa10.96□□□□□ -0.65
YBX3-203ENST00000366286 CPA6Q8N4T0 437 aa10.96□□□□□ -0.65
YBX3-203ENST00000366286 TTC39CQ8N584 583 aa10.96□□□□□ -0.65
YBX3-203ENST00000366286 TRIML1Q8N9V2 468 aa10.96□□□□□ -0.65
YBX3-203ENST00000366286 SLC4A11Q8NBS3 891 aa10.96□□□□□ -0.65
YBX3-203ENST00000366286 NKD2Q969F2 451 aaPredicted RBP10.96□□□□□ -0.65
YBX3-203ENST00000366286 CCSER2Q9H7U1 834 aa10.96□□□□□ -0.65
YBX3-203ENST00000366286 ECT2Q9H8V3 914 aa10.96□□□□□ -0.65
YBX3-203ENST00000366286 COMMD8Q9NX08 183 aa10.96□□□□□ -0.65
YBX3-203ENST00000366286 SMPD4Q9NXE4 827 aa10.96□□□□□ -0.65
YBX3-203ENST00000366286 KIAA1468Q9P260 1216 aa10.96□□□□□ -0.65
YBX3-203ENST00000366286 SCAMP3O14828 347 aaKnown RBP10.95□□□□□ -0.66
YBX3-203ENST00000366286 COCHO43405 550 aa10.95□□□□□ -0.66
YBX3-203ENST00000366286 ZDHHC11BP0C7U3 371 aa10.95□□□□□ -0.66
YBX3-203ENST00000366286 GJA4P35212 333 aa10.95□□□□□ -0.66
YBX3-203ENST00000366286 PGFP49763 221 aa10.95□□□□□ -0.66
YBX3-203ENST00000366286 TUBP50607 506 aa10.95□□□□□ -0.66
YBX3-203ENST00000366286 CUL2Q13617 745 aa10.95□□□□□ -0.66
YBX3-203ENST00000366286 ZNF528Q3MIS6 628 aa10.95□□□□□ -0.66
YBX3-203ENST00000366286 TMEM196Q5HYL7 178 aa10.95□□□□□ -0.66
YBX3-203ENST00000366286 DGKKQ5KSL6 1271 aa10.95□□□□□ -0.66
YBX3-203ENST00000366286 HECTD3Q5T447 861 aa10.95□□□□□ -0.66
YBX3-203ENST00000366286 SNX30Q5VWJ9 437 aa10.95□□□□□ -0.66
YBX3-203ENST00000366286 NAIF1Q69YI7 327 aaPredicted RBP10.95□□□□□ -0.66
YBX3-203ENST00000366286 FSTL4Q6MZW2 842 aa10.95□□□□□ -0.66
YBX3-203ENST00000366286 ZC3H14Q6PJT7 736 aaKnown RBP10.95□□□□□ -0.66
YBX3-203ENST00000366286 TMEM176AQ96HP8 235 aa10.95□□□□□ -0.66
YBX3-203ENST00000366286 HEXIM2Q96MH2 286 aaKnown RBP10.95□□□□□ -0.66
YBX3-203ENST00000366286 DNAI2Q9GZS0 605 aa10.95□□□□□ -0.66
YBX3-203ENST00000366286 FBXO44Q9H4M3 255 aa10.95□□□□□ -0.66
YBX3-203ENST00000366286 FAM124BQ9H5Z6 455 aaPredicted RBP10.95□□□□□ -0.66
YBX3-203ENST00000366286 PNPLA8Q9NP80 782 aa10.95□□□□□ -0.66
YBX3-203ENST00000366286 CFAP97Q9P2B7 532 aa10.95□□□□□ -0.66
YBX3-203ENST00000366286 CHORDC1Q9UHD1 332 aaPredicted RBP10.95□□□□□ -0.66
YBX3-203ENST00000366286 TRDMT1O14717 391 aaKnown RBP10.94□□□□□ -0.66
YBX3-203ENST00000366286 NFATC1O95644 943 aa10.94□□□□□ -0.66
YBX3-203ENST00000366286 TDGF1P13385 188 aa10.94□□□□□ -0.66
YBX3-203ENST00000366286 ACO1P21399 889 aaKnown RBP10.94□□□□□ -0.66
YBX3-203ENST00000366286 TBXAS1P24557 533 aaPredicted RBP10.94□□□□□ -0.66
YBX3-203ENST00000366286 CCR3P51677 355 aa10.94□□□□□ -0.66
YBX3-203ENST00000366286 YWHAEP62258 255 aaKnown RBP10.94□□□□□ -0.66
YBX3-203ENST00000366286 SATB1Q01826 763 aa10.94□□□□□ -0.66
YBX3-203ENST00000366286 LRMPQ12912 555 aa10.94□□□□□ -0.66
YBX3-203ENST00000366286 DDX42Q86XP3 938 aaKnown RBP eCLIP10.94□□□□□ -0.66
YBX3-203ENST00000366286 TRIM59Q8IWR1 403 aa10.94□□□□□ -0.66
YBX3-203ENST00000366286 SPEM1Q8N4L4 309 aa10.94□□□□□ -0.66
YBX3-203ENST00000366286 UBR7Q8N806 425 aa10.94□□□□□ -0.66
YBX3-203ENST00000366286 ZFRQ96KR1 1074 aaKnown RBP10.94□□□□□ -0.66
YBX3-203ENST00000366286 SRRTQ9BXP5 876 aaKnown RBP10.94□□□□□ -0.66
YBX3-203ENST00000366286 DUSP16Q9BY84 665 aa10.94□□□□□ -0.66
YBX3-203ENST00000366286 LINC00597Q9H2U6 94 aa10.94□□□□□ -0.66
YBX3-203ENST00000366286 CLSTN2Q9H4D0 955 aa10.94□□□□□ -0.66
YBX3-203ENST00000366286 TLR8Q9NR97 1041 aaKnown RBP10.94□□□□□ -0.66
YBX3-203ENST00000366286 SCML2Q9UQR0 700 aa10.94□□□□□ -0.66
YBX3-203ENST00000366286 A0A1W2PQH9 124 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 PMM2O15305 246 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 TLR5O60602 858 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 GNA14O95837 355 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 EGFP01133 1207 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 CYP17A1P05093 508 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 IRF1P10914 325 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 MARSP56192 900 aaKnown RBP10.93□□□□□ -0.66
YBX3-203ENST00000366286 AMPD2Q01433 879 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 GRSF1Q12849 480 aaKnown RBP eCLIP10.93□□□□□ -0.66
YBX3-203ENST00000366286 GOLGA7BQ2TAP0 167 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 ARHGAP17Q68EM7 881 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 PKN3Q6P5Z2 889 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 MAMSTRQ6ZN01 415 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 KIAA1958Q8N8K9 716 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 LMO3Q8TAP4 145 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 NELL1Q92832 810 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 NT5C1BQ96P26 610 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 P2RY13Q9BPV8 354 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 NACA2Q9H009 215 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 NMUR1Q9HB89 426 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 C2orf42Q9NWW7 574 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 OSER1Q9NX31 292 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 ZSCAN32Q9NX65 697 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 RWDD2AQ9UIY3 292 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 PCDHGA2Q9Y5H1 932 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 DMDP11532 3685 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 PIEZO1Q92508 2521 aa10.93□□□□□ -0.66
YBX3-203ENST00000366286 E2F8A0AVK6 867 aa10.92□□□□□ -0.66
YBX3-203ENST00000366286 SLC9A3R1O14745 358 aaPredicted RBP10.92□□□□□ -0.66
YBX3-203ENST00000366286 P4HA2O15460 535 aa10.92□□□□□ -0.66
YBX3-203ENST00000366286 LMNAP02545 664 aaKnown RBP10.92□□□□□ -0.66
YBX3-203ENST00000366286 AFPP02771 609 aaKnown RBP10.92□□□□□ -0.66
YBX3-203ENST00000366286 CD19P15391 556 aa10.92□□□□□ -0.66
YBX3-203ENST00000366286 GALK1P51570 392 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms