RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 WDR5BQ86VZ2 330 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 ELOA2Q8IYF1 753 aaPredicted RBP14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 SEMA4DQ92854 862 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 CD101Q93033 1021 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 FBXO32Q969P5 355 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 FAXDC2Q96IV6 333 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 TIGD1Q96MW7 591 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 HNRNPABQ99729 332 aaKnown RBP14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 MED10Q9BTT4 135 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 CHORDC1Q9UHD1 332 aaPredicted RBP14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 PCDHA5Q9Y5H7 936 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 ATP8B3O60423 1300 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 MYO16Q9Y6X6 1858 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 CCDC163A0A0D9SF12 145 aa14.48□□□□□ -0.09
TNFRSF1A-202ENST00000366159 ATG13O75143 517 aa14.48□□□□□ -0.09
TNFRSF1A-202ENST00000366159 RNF40O75150 1001 aa14.48□□□□□ -0.09
TNFRSF1A-202ENST00000366159 CILPO75339 1184 aa14.48□□□□□ -0.09
TNFRSF1A-202ENST00000366159 NFATC1O95644 943 aa14.48□□□□□ -0.09
TNFRSF1A-202ENST00000366159 CHRM1P11229 460 aaPredicted RBP14.48□□□□□ -0.09
TNFRSF1A-202ENST00000366159 ID4P47928 161 aa14.48□□□□□ -0.09
TNFRSF1A-202ENST00000366159 KRT39Q6A163 491 aa14.48□□□□□ -0.09
TNFRSF1A-202ENST00000366159 CLEC20AQ6ZU45 233 aa14.48□□□□□ -0.09
TNFRSF1A-202ENST00000366159 FILIP1Q7Z7B0 1213 aa14.48□□□□□ -0.09
TNFRSF1A-202ENST00000366159 RMDN1Q96DB5 314 aa14.48□□□□□ -0.09
TNFRSF1A-202ENST00000366159 EEF2KMTQ96G04 330 aa14.48□□□□□ -0.09
TNFRSF1A-202ENST00000366159 CCDC34Q96HJ3 373 aa14.48□□□□□ -0.09
TNFRSF1A-202ENST00000366159 NIF3L1Q9GZT8 377 aa14.48□□□□□ -0.09
TNFRSF1A-202ENST00000366159 KRT82Q9NSB4 513 aa14.48□□□□□ -0.09
TNFRSF1A-202ENST00000366159 RMND1Q9NWS8 449 aa14.48□□□□□ -0.09
TNFRSF1A-202ENST00000366159 CEP250Q9BV73 2442 aa14.48□□□□□ -0.09
TNFRSF1A-202ENST00000366159 ABCB7O75027 752 aa14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 ABL1P00519 1130 aa14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 CYP17A1P05093 508 aa14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 PMS1P54277 932 aaKnown RBP14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 MAP3K7CLP57077 242 aa14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 IFRD2Q12894 506 aaPredicted RBP14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 NR1H3Q13133 447 aa14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 SRSF5Q13243 272 aaKnown RBP14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 HECTD3Q5T447 861 aa14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 ANKRD40Q6AI12 368 aa14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 LAIR1Q6GTX8 287 aa14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 RHBDF2Q6PJF5 856 aa14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 DDX42Q86XP3 938 aaKnown RBP eCLIP14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 GPR161Q8N6U8 529 aaKnown RBP14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 ERCC4Q92889 916 aaPredicted RBP14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 NT5C1AQ9BXI3 368 aa14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 CCSER2Q9H7U1 834 aa14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.47□□□□□ -0.093e-10■■■■■ 130.4
TNFRSF1A-202ENST00000366159 FAM49BQ9NUQ9 324 aa14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 POLR3BQ9NW08 1133 aaPredicted RBP14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 SMPD4Q9NXE4 827 aa14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 DLL3Q9NYJ7 618 aa14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 GMIPQ9P107 970 aa14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 CFAP97Q9P2B7 532 aa14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 NCDNQ9UBB6 729 aa14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 COQ4Q9Y3A0 265 aa14.47□□□□□ -0.09
TNFRSF1A-202ENST00000366159 A0A0A0MRY4 1105 aa14.46□□□□□ -0.09
TNFRSF1A-202ENST00000366159 E2F8A0AVK6 867 aa14.46□□□□□ -0.09
TNFRSF1A-202ENST00000366159 K7EQS6 105 aa14.46□□□□□ -0.09
TNFRSF1A-202ENST00000366159 CETN3O15182 167 aa14.46□□□□□ -0.09
TNFRSF1A-202ENST00000366159 GREM1O60565 184 aa14.46□□□□□ -0.09
TNFRSF1A-202ENST00000366159 MBL2P11226 248 aaPredicted RBP14.46□□□□□ -0.09
TNFRSF1A-202ENST00000366159 DHCR24Q15392 516 aa14.46□□□□□ -0.09
TNFRSF1A-202ENST00000366159 SYT13Q7L8C5 426 aa14.46□□□□□ -0.09
TNFRSF1A-202ENST00000366159 GPRIN1Q7Z2K8 1008 aa14.46□□□□□ -0.09
TNFRSF1A-202ENST00000366159 CAMKK1Q8N5S9 505 aa14.46□□□□□ -0.09
TNFRSF1A-202ENST00000366159 FBXL13Q8NEE6 735 aa14.46□□□□□ -0.09
TNFRSF1A-202ENST00000366159 TTC16Q8NEE8 873 aa14.46□□□□□ -0.09
TNFRSF1A-202ENST00000366159 WBP2Q969T9 261 aa14.46□□□□□ -0.09
TNFRSF1A-202ENST00000366159 EXOC4Q96A65 974 aa14.46□□□□□ -0.09
TNFRSF1A-202ENST00000366159 CYFIP2Q96F07 1278 aa14.46□□□□□ -0.09
TNFRSF1A-202ENST00000366159 HINFPQ9BQA5 517 aa14.46□□□□□ -0.09
TNFRSF1A-202ENST00000366159 IMPG2Q9BZV3 1241 aa14.46□□□□□ -0.09
TNFRSF1A-202ENST00000366159 FBXO44Q9H4M3 255 aa14.46□□□□□ -0.09
TNFRSF1A-202ENST00000366159 FAM124BQ9H5Z6 455 aaPredicted RBP14.46□□□□□ -0.09
TNFRSF1A-202ENST00000366159 PNPLA8Q9NP80 782 aa14.46□□□□□ -0.09
TNFRSF1A-202ENST00000366159 PARD6AQ9NPB6 346 aa14.46□□□□□ -0.09
TNFRSF1A-202ENST00000366159 RAB20Q9NX57 234 aa14.46□□□□□ -0.09
TNFRSF1A-202ENST00000366159 ATG2BQ96BY7 2078 aa14.46□□□□□ -0.1
TNFRSF1A-202ENST00000366159 GOLGA6L4A6NEF3 574 aa14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 ANTXRLA6NF34 631 aa14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 SLC9A3R1O14745 358 aaPredicted RBP14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 SLC16A3O15427 465 aaKnown RBP14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 FAM200BP0CF97 657 aa14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 ADORA2BP29275 332 aa14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 EIF2DP41214 584 aaKnown RBP14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 MXI1P50539 228 aa14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 FKBP3Q00688 224 aaKnown RBP14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 MESP2Q0VG99 397 aa14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 SIM2Q14190 667 aaPredicted RBP14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 CBWD6Q4V339 395 aa14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 CBWD3Q5JTY5 395 aa14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 CBWD5Q5RIA9 395 aa14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 PPP1R26Q5T8A7 1209 aaPredicted RBP14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 HEATR6Q6AI08 1181 aaKnown RBP14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 RPLP0P6Q8NHW5 317 aa14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 OTUB2Q96DC9 234 aa14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 GTPBP4Q9BZE4 634 aaKnown RBP14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 MMRN2Q9H8L6 949 aa14.45□□□□□ -0.1
TNFRSF1A-202ENST00000366159 CYLDQ9NQC7 956 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms