RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 IPCEF1Q8WWN9 437 aaPredicted RBP3.87□□□□□ -1.79
RNU4-48P-201ENST00000365559 NELL1Q92832 810 aa3.87□□□□□ -1.79
RNU4-48P-201ENST00000365559 RSPRY1Q96DX4 576 aa3.87□□□□□ -1.79
RNU4-48P-201ENST00000365559 IQCDQ96DY2 449 aa3.87□□□□□ -1.79
RNU4-48P-201ENST00000365559 THAP7Q9BT49 309 aaPredicted RBP3.87□□□□□ -1.79
RNU4-48P-201ENST00000365559 VN1R3Q9BXE9 311 aa3.87□□□□□ -1.79
RNU4-48P-201ENST00000365559 ARNT2Q9HBZ2 717 aa3.87□□□□□ -1.79
RNU4-48P-201ENST00000365559 SH3BP4Q9P0V3 963 aa3.87□□□□□ -1.79
RNU4-48P-201ENST00000365559 LPAR3Q9UBY5 353 aa3.87□□□□□ -1.79
RNU4-48P-201ENST00000365559 CAPN11Q9UMQ6 739 aa3.87□□□□□ -1.79
RNU4-48P-201ENST00000365559 USP22Q9UPT9 525 aa3.87□□□□□ -1.79
RNU4-48P-201ENST00000365559 FNDC1Q4ZHG4 1894 aaPredicted RBP3.87□□□□□ -1.79
RNU4-48P-201ENST00000365559 ANO9A1A5B4 782 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 MANSC4A6NHS7 340 aaPredicted RBP3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 AQP7P3A6NL99 342 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 MASP2O00187 686 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 PMPCBO75439 489 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 RBMXL2O75526 392 aaKnown RBP3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 INMTO95050 263 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 PRKCBP05771 671 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 KRT18P05783 430 aaKnown RBP3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 NHLRC4P0CG21 123 aaPredicted RBP3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 FGFR2P21802 821 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 GKP32189 559 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 STT3AP46977 705 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 GATMP50440 423 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 TIRAPP58753 221 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 PSG6Q00889 435 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 TFF2Q03403 129 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 TBC1D25Q3MII6 688 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 MANEALQ5VSG8 457 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 IL31Q6EBC2 164 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 CCDC33Q8N5R6 958 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 METTL25Q8N6Q8 603 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 VGLL2Q8N8G2 317 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 ABHD11Q8NFV4 315 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 SMCR8Q8TEV9 937 aaPredicted RBP3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 PARD3BQ8TEW8 1205 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 CTHRC1Q96CG8 243 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 WDYHV1Q96HA8 205 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 FAM83DQ9H4H8 585 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 VPS51Q9UID3 782 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 RIMKLBQ9ULI2 386 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 HPSEQ9Y251 543 aa3.86□□□□□ -1.79
RNU4-48P-201ENST00000365559 A0A1W2PPC4 97 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 WIPF3A6NGB9 483 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 SMIM22K7EJ46 135 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 PSMD9O00233 223 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 THAP12O43422 761 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 SPRY2O43597 315 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 NCK2O43639 380 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 JTBO76095 146 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 MYL1P05976 194 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 DLDP09622 509 aaKnown RBP3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 ZNF37AP17032 561 aaPredicted RBP3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 FBLP22087 321 aaKnown RBP3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 MTHFSP49914 203 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 NEK3P51956 506 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 IFIT5Q13325 482 aaKnown RBP3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 LONRF1Q17RB8 773 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 MAP9Q49MG5 647 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 TMEM119Q4V9L6 283 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 RNASE12Q5GAN4 147 aaKnown RBP3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 KIRREL2Q6UWL6 708 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 USP49Q70CQ1 688 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 ZNF804AQ7Z570 1209 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 SIRT6Q8N6T7 355 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 C11orf44Q8N8P7 122 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 CYP2W1Q8TAV3 490 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 DPF1Q92782 380 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 LRRC46Q96FV0 321 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 INO80BQ9C086 356 aaPredicted RBP3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 MYO1AQ9UBC5 1043 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 DNAJB11Q9UBS4 358 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 AMFRQ9UKV5 643 aa3.85□□□□□ -1.79
RNU4-48P-201ENST00000365559 CLCA1A8K7I4 914 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 EXOC5O00471 708 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 CES2O00748 559 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 APOL1O14791 398 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 AREL1O15033 823 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 EXOC3O60645 756 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 FGAP02671 866 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 NBPF7P0C2Y1 421 aaPredicted RBP3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 TNFSF4P23510 183 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 CD38P28907 300 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 ATICP31939 592 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 TM4SF4P48230 202 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 ALDH5A1P51649 535 aaPredicted RBP3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 C21orf58P58505 322 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 HOXA4Q00056 320 aaPredicted RBP3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 FHL3Q13643 280 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 PMS2P11Q13670 270 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 PROSER3Q2NL68 480 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 CCDC181Q5TID7 509 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 SUMO4Q6EEV6 95 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 HIBCHQ6NVY1 386 aaPredicted RBP3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 SYCE2Q6PIF2 218 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 MTHFD1LQ6UB35 978 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 CLEC9AQ6UXN8 241 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 TRIM72Q6ZMU5 477 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms