RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 ANKRD13BQ86YJ7 626 aa2.95□□□□□ -1.94
RNU4-42P-201ENST00000364738 RAB11FIP4Q86YS3 637 aa2.95□□□□□ -1.94
RNU4-42P-201ENST00000364738 DENND1CQ8IV53 801 aa2.95□□□□□ -1.94
RNU4-42P-201ENST00000364738 ACRBPQ8NEB7 543 aa2.95□□□□□ -1.94
RNU4-42P-201ENST00000364738 OR6B3Q8NGW1 331 aa2.95□□□□□ -1.94
RNU4-42P-201ENST00000364738 MAFAQ8NHW3 353 aaPredicted RBP2.95□□□□□ -1.94
RNU4-42P-201ENST00000364738 DNAJB14Q8TBM8 379 aa2.95□□□□□ -1.94
RNU4-42P-201ENST00000364738 DIS3LQ8TF46 1054 aaKnown RBP2.95□□□□□ -1.94
RNU4-42P-201ENST00000364738 KBTBD7Q8WVZ9 684 aa2.95□□□□□ -1.94
RNU4-42P-201ENST00000364738 MARK4Q96L34 752 aa2.95□□□□□ -1.94
RNU4-42P-201ENST00000364738 HS6ST2Q96MM7 605 aa2.95□□□□□ -1.94
RNU4-42P-201ENST00000364738 SLC12A5Q9H2X9 1139 aa2.95□□□□□ -1.94
RNU4-42P-201ENST00000364738 TCF7L1Q9HCS4 588 aa2.95□□□□□ -1.94
RNU4-42P-201ENST00000364738 HOMER2Q9NSB8 354 aa2.95□□□□□ -1.94
RNU4-42P-201ENST00000364738 POT1Q9NUX5 634 aa2.95□□□□□ -1.94
RNU4-42P-201ENST00000364738 TMEM184CQ9NVA4 438 aa2.95□□□□□ -1.94
RNU4-42P-201ENST00000364738 DRG1Q9Y295 367 aaKnown RBP2.95□□□□□ -1.94
RNU4-42P-201ENST00000364738 A0A088AWK7 358 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 CD8B2A6NJW9 211 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 TMEM233B4DJY2 109 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 M0R3H8 397 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 CRYABP02511 175 aaKnown RBP2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 ALPLP05186 524 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 PSG1P11464 419 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 HTR1BP28222 390 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 EPHA3P29320 983 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 THBS3P49746 956 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 NEK2P51955 445 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 CFHR1Q03591 330 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 SRSF1Q07955 248 aaKnown RBP eCLIP2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 SLC13A2Q13183 592 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 RAB32Q13637 225 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 KCNB1Q14721 858 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 SEC23BQ15437 767 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 BRDTQ58F21 947 aaPredicted RBP2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 CC2D1BQ5T0F9 858 aaKnown RBP2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 CACHD1Q5VU97 1274 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 C9orf47Q6ZRZ4 202 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 MEPCEQ7L2J0 689 aaKnown RBP2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 PIP4P1Q86T03 277 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 DAAM2Q86T65 1068 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 LINC01465Q8N7H1 131 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 NT5C1BQ96P26 610 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 VN1R3Q9BXE9 311 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 PCDH12Q9NPG4 1184 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 AASDHPPTQ9NRN7 309 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 HEY2Q9UBP5 337 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 USP22Q9UPT9 525 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 ANKRD6Q9Y2G4 727 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 CDY1Q9Y6F8 540 aa2.94□□□□□ -1.94
RNU4-42P-201ENST00000364738 PRR23D1E9PI22 279 aaPredicted RBP2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 H3BML4 177 aa2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 AP1G1O43747 822 aa2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 TMPRSS11DO60235 418 aa2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 TBC1D4O60343 1298 aa2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 TLR2O60603 784 aa2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 RASAL1O95294 804 aa2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 TOMM40O96008 361 aa2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 PRR23D2P0DMB1 279 aaPredicted RBP2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 KITP10721 976 aa2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 CREB1P16220 341 aa2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 NCLP19338 710 aaKnown RBP2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 THBS4P35443 961 aa2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 ME1P48163 572 aa2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 NANOS2P60321 138 aaKnown RBP2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 RPS13P62277 151 aaKnown RBP2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 LEXMQ3ZCV2 418 aa2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 TMEM63BQ5T3F8 832 aa2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 DCAF12L1Q5VU92 463 aa2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 VSTM1Q6UX27 236 aa2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 RANBP10Q6VN20 620 aa2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 DEF8Q6ZN54 512 aa2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 LIX1LQ8IVB5 337 aa2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 C16orf71Q8IYS4 520 aaPredicted RBP2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 ARFGAP1Q8N6T3 406 aa2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 ZNF548Q8NEK5 533 aaPredicted RBP2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 SPATA3Q8NHX4 192 aa2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 HOOK2Q96ED9 719 aa2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 PPP1R9BQ96SB3 815 aa2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 ZMAT3Q9HA38 289 aaKnown RBP2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 MAFFQ9ULX9 164 aa2.93□□□□□ -1.94
RNU4-42P-201ENST00000364738 FAM90A8PA6NJQ4 464 aa2.92□□□□□ -1.94
RNU4-42P-201ENST00000364738 B4DGG1 531 aa2.92□□□□□ -1.94
RNU4-42P-201ENST00000364738 SPRY2O43597 315 aa2.92□□□□□ -1.94
RNU4-42P-201ENST00000364738 RGS10O43665 173 aa2.92□□□□□ -1.94
RNU4-42P-201ENST00000364738 FAM90A13PP0C7W8 464 aa2.92□□□□□ -1.94
RNU4-42P-201ENST00000364738 FAM90A24PP0C7X0 464 aa2.92□□□□□ -1.94
RNU4-42P-201ENST00000364738 UQCRC1P31930 480 aa2.92□□□□□ -1.94
RNU4-42P-201ENST00000364738 YPEL5P62699 121 aa2.92□□□□□ -1.94
RNU4-42P-201ENST00000364738 SEMA3AQ14563 771 aa2.92□□□□□ -1.94
RNU4-42P-201ENST00000364738 SLC9C1Q4G0N8 1177 aa2.92□□□□□ -1.94
RNU4-42P-201ENST00000364738 COLCA1Q6ZS62 124 aa2.92□□□□□ -1.94
RNU4-42P-201ENST00000364738 PIM3Q86V86 326 aa2.92□□□□□ -1.94
RNU4-42P-201ENST00000364738 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.92□□□□□ -1.94
RNU4-42P-201ENST00000364738 SMRP1Q8NCR6 262 aa2.92□□□□□ -1.94
RNU4-42P-201ENST00000364738 CTHRC1Q96CG8 243 aa2.92□□□□□ -1.94
RNU4-42P-201ENST00000364738 WDYHV1Q96HA8 205 aa2.92□□□□□ -1.94
RNU4-42P-201ENST00000364738 LYZL4Q96KX0 146 aa2.92□□□□□ -1.94
RNU4-42P-201ENST00000364738 DPH1Q9BZG8 443 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms