RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 RAB11FIP4Q86YS3 637 aa4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 TIFAQ96CG3 184 aa4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 ZBTB45Q96K62 511 aaPredicted RBP4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 ASB2Q96Q27 587 aa4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 VN1R3Q9BXE9 311 aa4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 SLC29A3Q9BZD2 475 aa4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 SEMA4CQ9C0C4 833 aa4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 CHST8Q9H2A9 424 aa4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 TFCP2L1Q9NZI6 479 aa4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 ARHGEF17Q96PE2 2063 aaPredicted RBP4.95□□□□□ -1.62
RNU6-553P-201ENST00000364047 WDR91A4D1P6 747 aa4.94□□□□□ -1.62
RNU6-553P-201ENST00000364047 FGAP02671 866 aa4.94□□□□□ -1.62
RNU6-553P-201ENST00000364047 TPH1P17752 444 aa4.94□□□□□ -1.62
RNU6-553P-201ENST00000364047 CERS1P27544 350 aa4.94□□□□□ -1.62
RNU6-553P-201ENST00000364047 MPGP29372 298 aa4.94□□□□□ -1.62
RNU6-553P-201ENST00000364047 CARSP49589 748 aaKnown RBP4.94□□□□□ -1.62
RNU6-553P-201ENST00000364047 ALDH5A1P51649 535 aaPredicted RBP4.94□□□□□ -1.62
RNU6-553P-201ENST00000364047 PGDP52209 483 aa4.94□□□□□ -1.62
RNU6-553P-201ENST00000364047 PSG6Q00889 435 aa4.94□□□□□ -1.62
RNU6-553P-201ENST00000364047 RNASE12Q5GAN4 147 aaKnown RBP4.94□□□□□ -1.62
RNU6-553P-201ENST00000364047 CYB5RLQ6IPT4 315 aa4.94□□□□□ -1.62
RNU6-553P-201ENST00000364047 KRTAP5-3Q6L8H2 238 aa4.94□□□□□ -1.62
RNU6-553P-201ENST00000364047 SFTPA1Q8IWL2 248 aa4.94□□□□□ -1.62
RNU6-553P-201ENST00000364047 IPCEF1Q8WWN9 437 aaPredicted RBP4.94□□□□□ -1.62
RNU6-553P-201ENST00000364047 RITA1Q96K30 269 aa4.94□□□□□ -1.62
RNU6-553P-201ENST00000364047 MSLNLQ96KJ4 702 aa4.94□□□□□ -1.62
RNU6-553P-201ENST00000364047 MMS19Q96T76 1030 aa4.94□□□□□ -1.62
RNU6-553P-201ENST00000364047 APOL5Q9BWW9 433 aa4.94□□□□□ -1.62
RNU6-553P-201ENST00000364047 INO80BQ9C086 356 aaPredicted RBP4.94□□□□□ -1.62
RNU6-553P-201ENST00000364047 AQP7P3A6NL99 342 aa4.93□□□□□ -1.62
RNU6-553P-201ENST00000364047 PPP6CO00743 305 aa4.93□□□□□ -1.62
RNU6-553P-201ENST00000364047 INMTO95050 263 aa4.93□□□□□ -1.62
RNU6-553P-201ENST00000364047 PRR35P0CG20 571 aa4.93□□□□□ -1.62
RNU6-553P-201ENST00000364047 RPL17P18621 184 aaKnown RBP4.93□□□□□ -1.62
RNU6-553P-201ENST00000364047 IL1R2P27930 398 aa4.93□□□□□ -1.62
RNU6-553P-201ENST00000364047 GATMP50440 423 aa4.93□□□□□ -1.62
RNU6-553P-201ENST00000364047 TIRAPP58753 221 aa4.93□□□□□ -1.62
RNU6-553P-201ENST00000364047 TIAL1Q01085 375 aaKnown RBP eCLIP4.93□□□□□ -1.62
RNU6-553P-201ENST00000364047 CERKLQ49MI3 558 aaPredicted RBP4.93□□□□□ -1.62
RNU6-553P-201ENST00000364047 MTX3Q5HYI7 312 aa4.93□□□□□ -1.62
RNU6-553P-201ENST00000364047 PTCHD4Q6ZW05 846 aa4.93□□□□□ -1.62
RNU6-553P-201ENST00000364047 BCDIN3DQ7Z5W3 292 aaKnown RBP4.93□□□□□ -1.62
RNU6-553P-201ENST00000364047 YTHDF3Q7Z739 585 aaKnown RBP4.93□□□□□ -1.62
RNU6-553P-201ENST00000364047 DGKHQ86XP1 1220 aa4.93□□□□□ -1.62
RNU6-553P-201ENST00000364047 SH2D3AQ9BRG2 576 aa4.93□□□□□ -1.62
RNU6-553P-201ENST00000364047 BTBD1Q9H0C5 482 aa4.93□□□□□ -1.62
RNU6-553P-201ENST00000364047 NUP62CLQ9H1M0 184 aa4.93□□□□□ -1.62
RNU6-553P-201ENST00000364047 FAM83DQ9H4H8 585 aa4.93□□□□□ -1.62
RNU6-553P-201ENST00000364047 RNF7Q9UBF6 113 aa4.93□□□□□ -1.62
RNU6-553P-201ENST00000364047 LPAR3Q9UBY5 353 aa4.93□□□□□ -1.62
RNU6-553P-201ENST00000364047 ZNF212Q9UDV6 495 aa4.93□□□□□ -1.62
RNU6-553P-201ENST00000364047 SNX13Q9Y5W8 968 aa4.93□□□□□ -1.62
RNU6-553P-201ENST00000364047 POC1B-GALNT4F8VUJ3 575 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 UBE2Q2LH0YL09 131 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 INO80B-WBP1J3KQ70 363 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 M0R3H8 397 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 GCATO75600 419 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 USP1O94782 785 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 MT-ND5P03915 603 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 TUBB4AP04350 444 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 CHRM5P08912 532 aaPredicted RBP4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 CREB1P16220 341 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 BTF3P20290 206 aaKnown RBP4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 KELP23276 732 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 ZNF81P51508 661 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 CEP78Q5JTW2 689 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 DENND2CQ68D51 928 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 ZNF626Q68DY1 528 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 PLAG1Q6DJT9 500 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 CATSPERGQ6ZRH7 1159 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 NEK8Q86SG6 692 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 GALNT4Q8N4A0 578 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 TTC17Q96AE7 1141 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 SNX22Q96L94 193 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 C5orf34Q96MH7 638 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 FYTTD1Q96QD9 318 aaKnown RBP4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 STRBPQ96SI9 672 aaKnown RBP4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 NRIP3Q9NQ35 241 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 SNX15Q9NRS6 342 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 DKK4Q9UBT3 224 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 ZNF70Q9UC06 446 aaPredicted RBP4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 RGS17Q9UGC6 210 aaPredicted RBP4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 CORO2BQ9UQ03 480 aa4.92□□□□□ -1.62
RNU6-553P-201ENST00000364047 TCRBV5S1A1TA0A578 114 aa4.91□□□□□ -1.62
RNU6-553P-201ENST00000364047 F8W8V4 182 aa4.91□□□□□ -1.62
RNU6-553P-201ENST00000364047 AGPSO00116 658 aa4.91□□□□□ -1.62
RNU6-553P-201ENST00000364047 EXOC5O00471 708 aa4.91□□□□□ -1.62
RNU6-553P-201ENST00000364047 ADAMTS3O15072 1205 aa4.91□□□□□ -1.62
RNU6-553P-201ENST00000364047 SPRY2O43597 315 aa4.91□□□□□ -1.62
RNU6-553P-201ENST00000364047 PQBP1O60828 265 aaKnown RBP4.91□□□□□ -1.62
RNU6-553P-201ENST00000364047 PARP1P09874 1014 aaKnown RBP4.91□□□□□ -1.62
RNU6-553P-201ENST00000364047 DIO1P49895 249 aa4.91□□□□□ -1.62
RNU6-553P-201ENST00000364047 COPB1P53618 953 aaKnown RBP4.91□□□□□ -1.62
RNU6-553P-201ENST00000364047 LMAN2Q12907 356 aa4.91□□□□□ -1.62
RNU6-553P-201ENST00000364047 KCNAB1Q14722 419 aa4.91□□□□□ -1.62
RNU6-553P-201ENST00000364047 FAM187BQ17R55 369 aa4.91□□□□□ -1.62
RNU6-553P-201ENST00000364047 SUPT20HL1Q3ZLR7 823 aa4.91□□□□□ -1.62
RNU6-553P-201ENST00000364047 SLC18B1Q6NT16 456 aa4.91□□□□□ -1.62
RNU6-553P-201ENST00000364047 KRT78Q8N1N4 520 aa4.91□□□□□ -1.62
RNU6-553P-201ENST00000364047 SDR16C5Q8N3Y7 309 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms