RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 SBK3P0C264 359 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 MYCLP12524 364 aaPredicted RBP0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 AMD1P17707 334 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 CDKN1AP38936 164 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 GLUD2P49448 558 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 HSD17B4P51659 736 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 COPB1P53618 953 aaKnown RBP0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 MANFP55145 182 aaKnown RBP0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 PHEXP78562 749 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 KCNA1Q09470 495 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 CAPRIN1Q14444 709 aaKnown RBP0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 LARS2Q15031 903 aaKnown RBP0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 DDR2Q16832 855 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 LONRF2Q1L5Z9 754 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 PABPC1LQ4VXU2 614 aaKnown RBP0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 ICE2Q659A1 982 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 KRTAP5-10Q6L8G5 202 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 FAM180AQ6UWF9 173 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 ADGRA1Q86SQ6 560 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 FGFRL1Q8N441 504 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 POC1AQ8NBT0 407 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 SPATA20Q8TB22 786 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 CCHCR1Q8TD31 782 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 LRRC8CQ8TDW0 803 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 VKORC1Q9BQB6 163 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 CDK19Q9BWU1 502 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 BACH2Q9BYV9 841 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 MMP28Q9H239 520 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 KCTD10Q9H3F6 313 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 GLOD4Q9HC38 313 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 ABCB10Q9NRK6 738 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 DNAJB11Q9UBS4 358 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 B4GALT6Q9UBX8 382 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 MAFFQ9ULX9 164 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 GABRQQ9UN88 632 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 EDARQ9UNE0 448 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 MRPS23Q9Y3D9 190 aaKnown RBP0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 PTGDR2Q9Y5Y4 395 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 RNF215Q9Y6U7 377 aa0.28□□□□□ -2.36
RNU6-340P-201ENST00000364005 COL16A1Q07092 1604 aaPredicted RBP0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 ZNF646O15015 1829 aaPredicted RBP0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 TRBV5-3A0A0A0MS03 114 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 A0A0G2JK05 382 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 KLLNB2CW77 178 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 AP4M1O00189 453 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 INPPL1O15357 1258 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 DNAJC8O75937 253 aaPredicted RBP0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 FGAP02671 866 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 WEE2P0C1S8 567 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 MTHFD1P11586 935 aaKnown RBP0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 FGF5P12034 268 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 ARSAP15289 507 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 PHKG2P15735 406 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 ZNF12P17014 697 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 CHRM3P20309 590 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 DDCP20711 480 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 TACR3P29371 465 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 HOXD3P31249 432 aaPredicted RBP0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 IARSP41252 1262 aaKnown RBP0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 SLC6A9P48067 706 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 DRG2P55039 364 aaKnown RBP0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 KRTAP10-10P60014 251 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 ABATP80404 500 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 ATP8B2P98198 1209 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 GRSF1Q12849 480 aaKnown RBP eCLIP0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 ATP2B3Q16720 1220 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 FLYWCH1Q4VC44 716 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 TRIM61Q5EBN2 209 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 GJC2Q5T442 439 aaPredicted RBP0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 C9orf139Q6ZV77 190 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 SPATC1Q76KD6 591 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 EXOC3L1Q86VI1 746 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 CHPFQ8IZ52 775 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 CBARPQ8N350 705 aaPredicted RBP0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 ZGPATQ8N5A5 531 aaKnown RBP0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 LINC00612Q8N6U2 182 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 DCBLD1Q8N8Z6 715 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 ENGASEQ8NFI3 743 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 ATG4AQ8WYN0 398 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 INPP5DQ92835 1189 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 CYFIP2Q96F07 1278 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 RBM12Q9NTZ6 932 aaKnown RBP0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 ETAA1Q9NY74 926 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 JKAMPQ9P055 326 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 COL20A1Q9P218 1284 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 SERTAD3Q9UJW9 196 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 TCF19Q9Y242 345 aa0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 SIRT4Q9Y6E7 314 aaPredicted RBP0.27□□□□□ -2.37
RNU6-340P-201ENST00000364005 BECN2A8MW95 431 aa0.26□□□□□ -2.37
RNU6-340P-201ENST00000364005 GRM6O15303 877 aa0.26□□□□□ -2.37
RNU6-340P-201ENST00000364005 AKAP10O43572 662 aa0.26□□□□□ -2.37
RNU6-340P-201ENST00000364005 VPS4BO75351 444 aa0.26□□□□□ -2.37
RNU6-340P-201ENST00000364005 SSBP05455 408 aaKnown RBP eCLIP0.26□□□□□ -2.37
RNU6-340P-201ENST00000364005 APEHP13798 732 aaKnown RBP0.26□□□□□ -2.37
RNU6-340P-201ENST00000364005 ATF7P17544 494 aaPredicted RBP0.26□□□□□ -2.37
RNU6-340P-201ENST00000364005 LUMP51884 338 aaPredicted RBP0.26□□□□□ -2.37
RNU6-340P-201ENST00000364005 CCT2P78371 535 aaKnown RBP0.26□□□□□ -2.37
RNU6-340P-201ENST00000364005 CDK17Q00537 523 aa0.26□□□□□ -2.37
RNU6-340P-201ENST00000364005 PSG6Q00889 435 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms