RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 PABPC5Q96DU9 382 aaKnown RBP21.72■■□□□ 1.07
SHISA4-201ENST00000362011 KCNK16Q96T55 309 aa21.72■■□□□ 1.07
SHISA4-201ENST00000362011 NUP85Q9BW27 656 aa21.72■■□□□ 1.07
SHISA4-201ENST00000362011 LRRC4Q9HBW1 653 aa21.72■■□□□ 1.07
SHISA4-201ENST00000362011 MRPL47Q9HD33 250 aaKnown RBP21.72■■□□□ 1.07
SHISA4-201ENST00000362011 PARVAQ9NVD7 372 aa21.72■■□□□ 1.07
SHISA4-201ENST00000362011 AFF4Q9UHB7 1163 aaKnown RBP21.72■■□□□ 1.07
SHISA4-201ENST00000362011 PAXBP1Q9Y5B6 917 aa21.72■■□□□ 1.07
SHISA4-201ENST00000362011 OBSL1O75147 1896 aa21.71■■□□□ 1.07
SHISA4-201ENST00000362011 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.71■■□□□ 1.07
SHISA4-201ENST00000362011 HHLA1C9JL84 531 aa21.71■■□□□ 1.07
SHISA4-201ENST00000362011 PIK3R2O00459 728 aa21.71■■□□□ 1.07
SHISA4-201ENST00000362011 BUB1O43683 1085 aa21.71■■□□□ 1.07
SHISA4-201ENST00000362011 LCP1P13796 627 aa21.71■■□□□ 1.07
SHISA4-201ENST00000362011 ERVFC1P60507 584 aa21.71■■□□□ 1.07
SHISA4-201ENST00000362011 GPM6BQ13491 265 aa21.71■■□□□ 1.07
SHISA4-201ENST00000362011 PLPP4Q5VZY2 271 aa21.71■■□□□ 1.07
SHISA4-201ENST00000362011 LLGL2Q6P1M3 1020 aa21.71■■□□□ 1.07
SHISA4-201ENST00000362011 C3orf20Q8ND61 904 aa21.71■■□□□ 1.07
SHISA4-201ENST00000362011 ZNF564Q8TBZ8 553 aaPredicted RBP21.71■■□□□ 1.07
SHISA4-201ENST00000362011 MCRS1Q96EZ8 462 aa21.71■■□□□ 1.07
SHISA4-201ENST00000362011 CALR3Q96L12 384 aaKnown RBP21.71■■□□□ 1.07
SHISA4-201ENST00000362011 SELENOOQ9BVL4 669 aa21.71■■□□□ 1.07
SHISA4-201ENST00000362011 SALL4Q9UJQ4 1053 aa21.71■■□□□ 1.07
SHISA4-201ENST00000362011 IRAK3Q9Y616 596 aa21.71■■□□□ 1.07
SHISA4-201ENST00000362011 F8VP50 259 aa21.7■■□□□ 1.06
SHISA4-201ENST00000362011 GOLGA8SH3BPF8 625 aa21.7■■□□□ 1.06
SHISA4-201ENST00000362011 GRM6O15303 877 aa21.7■■□□□ 1.06
SHISA4-201ENST00000362011 TEX28O15482 410 aa21.7■■□□□ 1.06
SHISA4-201ENST00000362011 KIF5CO60282 957 aa21.7■■□□□ 1.06
SHISA4-201ENST00000362011 GABBR2O75899 941 aa21.7■■□□□ 1.06
SHISA4-201ENST00000362011 MTA2O94776 668 aa21.7■■□□□ 1.06
SHISA4-201ENST00000362011 ABLIM3O94929 683 aa21.7■■□□□ 1.06
SHISA4-201ENST00000362011 MOCS3O95396 460 aa21.7■■□□□ 1.06
SHISA4-201ENST00000362011 VNN2O95498 520 aa21.7■■□□□ 1.06
SHISA4-201ENST00000362011 HAPLN1P10915 354 aaPredicted RBP21.7■■□□□ 1.06
SHISA4-201ENST00000362011 DNAJB1P25685 340 aa21.7■■□□□ 1.06
SHISA4-201ENST00000362011 HADHBP55084 474 aaKnown RBP21.7■■□□□ 1.06
SHISA4-201ENST00000362011 ADCY1Q08828 1119 aa21.7■■□□□ 1.06
SHISA4-201ENST00000362011 ADIGQ0VDE8 80 aa21.7■■□□□ 1.06
SHISA4-201ENST00000362011 MGAT5BQ3V5L5 792 aa21.7■■□□□ 1.06
SHISA4-201ENST00000362011 FAM183BPQ6ZVS7 135 aa21.7■■□□□ 1.06
SHISA4-201ENST00000362011 ZDHHC17Q8IUH5 632 aa21.7■■□□□ 1.06
SHISA4-201ENST00000362011 TTC9BQ8N6N2 239 aa21.7■■□□□ 1.06
SHISA4-201ENST00000362011 ZNF461Q8TAF7 563 aa21.7■■□□□ 1.06
SHISA4-201ENST00000362011 C8orf48Q96LL4 319 aa21.7■■□□□ 1.06
SHISA4-201ENST00000362011 EMILIN2Q9BXX0 1053 aa21.7■■□□□ 1.06
SHISA4-201ENST00000362011 NGRNQ9NPE2 291 aaKnown RBP21.7■■□□□ 1.06
SHISA4-201ENST00000362011 OSGEPQ9NPF4 335 aa21.7■■□□□ 1.06
SHISA4-201ENST00000362011 HSFX1Q9UBD0 423 aa21.7■■□□□ 1.06
SHISA4-201ENST00000362011 TCRBV5S1A1TA0A578 114 aa21.69■■□□□ 1.06
SHISA4-201ENST00000362011 FSCN2O14926 492 aa21.69■■□□□ 1.06
SHISA4-201ENST00000362011 CNPP09543 421 aaKnown RBP21.69■■□□□ 1.06
SHISA4-201ENST00000362011 ALADP13716 330 aa21.69■■□□□ 1.06
SHISA4-201ENST00000362011 TKTL1P51854 596 aa21.69■■□□□ 1.06
SHISA4-201ENST00000362011 DUSP4Q13115 394 aa21.69■■□□□ 1.06
SHISA4-201ENST00000362011 RAB41Q5JT25 222 aa21.69■■□□□ 1.06
SHISA4-201ENST00000362011 PDE12Q6L8Q7 609 aaKnown RBP21.69■■□□□ 1.06
SHISA4-201ENST00000362011 SIX6OS1Q8N1H7 587 aa21.69■■□□□ 1.06
SHISA4-201ENST00000362011 KLHL5Q96PQ7 755 aa21.69■■□□□ 1.06
SHISA4-201ENST00000362011 SEPT5Q99719 369 aaPredicted RBP21.69■■□□□ 1.06
SHISA4-201ENST00000362011 CHORDC1Q9UHD1 332 aaPredicted RBP21.69■■□□□ 1.06
SHISA4-201ENST00000362011 SLC27A5Q9Y2P5 690 aa21.69■■□□□ 1.06
SHISA4-201ENST00000362011 ANAPC1Q9H1A4 1944 aa21.69■■□□□ 1.06
SHISA4-201ENST00000362011 C19orf67A6NJJ6 358 aa21.68■■□□□ 1.06
SHISA4-201ENST00000362011 PAPSS1O43252 624 aaPredicted RBP21.68■■□□□ 1.06
SHISA4-201ENST00000362011 FBXO21O94952 628 aa21.68■■□□□ 1.06
SHISA4-201ENST00000362011 ADH1AP07327 375 aa21.68■■□□□ 1.06
SHISA4-201ENST00000362011 ATF2P15336 505 aa21.68■■□□□ 1.06
SHISA4-201ENST00000362011 SCNN1AP37088 669 aa21.68■■□□□ 1.06
SHISA4-201ENST00000362011 TUFMP49411 452 aaKnown RBP21.68■■□□□ 1.06
SHISA4-201ENST00000362011 RPL10AP62906 217 aaKnown RBP21.68■■□□□ 1.06
SHISA4-201ENST00000362011 MAMLD1Q13495 774 aa21.68■■□□□ 1.06
SHISA4-201ENST00000362011 TCEAL5Q5H9L2 206 aa21.68■■□□□ 1.06
SHISA4-201ENST00000362011 FAM102AQ5T9C2 384 aaPredicted RBP21.68■■□□□ 1.06
SHISA4-201ENST00000362011 NYAP1Q6ZVC0 841 aa21.68■■□□□ 1.06
SHISA4-201ENST00000362011 GPRIN1Q7Z2K8 1008 aa21.68■■□□□ 1.06
SHISA4-201ENST00000362011 FEZF2Q8TBJ5 459 aa21.68■■□□□ 1.06
SHISA4-201ENST00000362011 C16orf45Q96MC5 204 aaPredicted RBP21.68■■□□□ 1.06
SHISA4-201ENST00000362011 ALS2CR12Q96Q35 445 aa21.68■■□□□ 1.06
SHISA4-201ENST00000362011 IRX2Q9BZI1 471 aaPredicted RBP21.68■■□□□ 1.06
SHISA4-201ENST00000362011 CRISPLD1Q9H336 500 aa21.68■■□□□ 1.06
SHISA4-201ENST00000362011 NSUN3Q9H649 340 aaKnown RBP21.68■■□□□ 1.06
SHISA4-201ENST00000362011 METTL5Q9NRN9 209 aaKnown RBP21.68■■□□□ 1.06
SHISA4-201ENST00000362011 PRKAG3Q9UGI9 489 aa21.68■■□□□ 1.06
SHISA4-201ENST00000362011 MAFFQ9ULX9 164 aa21.68■■□□□ 1.06
SHISA4-201ENST00000362011 CAPN6Q9Y6Q1 641 aa21.68■■□□□ 1.06
SHISA4-201ENST00000362011 C2orf71A6NGG8 1288 aa21.67■■□□□ 1.06
SHISA4-201ENST00000362011 SIGLEC16A6NMB1 481 aa21.67■■□□□ 1.06
SHISA4-201ENST00000362011 H3BQ06 376 aaPredicted RBP21.67■■□□□ 1.06
SHISA4-201ENST00000362011 CSPG5O95196 566 aa21.67■■□□□ 1.06
SHISA4-201ENST00000362011 ELF1P32519 619 aa21.67■■□□□ 1.06
SHISA4-201ENST00000362011 GPR15P49685 360 aa21.67■■□□□ 1.06
SHISA4-201ENST00000362011 SLC6A3Q01959 620 aa21.67■■□□□ 1.06
SHISA4-201ENST00000362011 DDR2Q16832 855 aa21.67■■□□□ 1.06
SHISA4-201ENST00000362011 CTC1Q2NKJ3 1217 aa21.67■■□□□ 1.06
SHISA4-201ENST00000362011 ZNF569Q5MCW4 686 aa21.67■■□□□ 1.06
SHISA4-201ENST00000362011 DCUN1D2Q6PH85 259 aa21.67■■□□□ 1.06
SHISA4-201ENST00000362011 OLFML1Q6UWY5 402 aa21.67■■□□□ 1.06
SHISA4-201ENST00000362011 SCUBE3Q8IX30 993 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms