RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 TRIM49D1C9J1S8 452 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 ZWINTO95229 277 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 CALB1P05937 261 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 DLDP09622 509 aaKnown RBP11.04□□□□□ -0.64
SMC3-201ENST00000361804 GRIA1P42261 906 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 NEK3P51956 506 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 TRPC3Q13507 836 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 DPYSL3Q14195 570 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 DARS2Q6PI48 645 aaKnown RBP11.04□□□□□ -0.64
SMC3-201ENST00000361804 VPS52Q8N1B4 723 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 RNF149Q8NC42 400 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 CYTH2Q99418 400 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 TRIM55Q9BYV6 548 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 DHX33Q9H6R0 707 aaKnown RBP11.04□□□□□ -0.64
SMC3-201ENST00000361804 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.04□□□□□ -0.64
SMC3-201ENST00000361804 CNTN6Q9UQ52 1028 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 STYXL1Q9Y6J8 313 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 TRPM7Q96QT4 1865 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 FCHO1O14526 889 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 ARIH2O95376 493 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 TBXAS1P24557 533 aaPredicted RBP11.04□□□□□ -0.64
SMC3-201ENST00000361804 TRMT10BQ6PF06 316 aaKnown RBP11.04□□□□□ -0.64
SMC3-201ENST00000361804 PDIK1LQ8N165 341 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 SCG3Q8WXD2 468 aaKnown RBP11.04□□□□□ -0.64
SMC3-201ENST00000361804 MCUR1Q96AQ8 359 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 RAB6BQ9NRW1 208 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 MYO18AQ92614 2054 aaKnown RBP11.04□□□□□ -0.64
SMC3-201ENST00000361804 A6NHS1 94 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 CXCL8P10145 99 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 ARL2P36404 184 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 RGS7P49802 495 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 TMEM132AQ24JP5 1023 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 DALRD3Q5D0E6 543 aaKnown RBP11.04□□□□□ -0.64
SMC3-201ENST00000361804 ZC3H12AQ5D1E8 599 aaKnown RBP11.04□□□□□ -0.64
SMC3-201ENST00000361804 DRICH1Q6PGQ1 229 aaPredicted RBP11.04□□□□□ -0.64
SMC3-201ENST00000361804 ARID3BQ8IVW6 561 aaPredicted RBP11.04□□□□□ -0.64
SMC3-201ENST00000361804 MPP5Q8N3R9 675 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 ZNF483Q8TF39 744 aaPredicted RBP11.04□□□□□ -0.64
SMC3-201ENST00000361804 USP6NLQ92738 828 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 NLRP4Q96MN2 994 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 LPIN3Q9BQK8 851 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 BTBD10Q9BSF8 475 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 NIF3L1Q9GZT8 377 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 PLAC1Q9HBJ0 212 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 TXNRD2Q9NNW7 524 aa11.04□□□□□ -0.64
SMC3-201ENST00000361804 WFS1O76024 890 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 EDNRBP24530 442 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 ETV4P43268 484 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 CDH6P55285 790 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 CRADDP78560 199 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 MCL1Q07820 350 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 PEX6Q13608 980 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 PIGHQ14442 188 aaPredicted RBP11.03□□□□□ -0.64
SMC3-201ENST00000361804 LY6KQ17RY6 165 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 SCYL2Q6P3W7 929 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 FAM161BQ96MY7 647 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 EBF4Q9BQW3 602 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 DHRS4Q9BTZ2 278 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 BATF3Q9NR55 127 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 DOCK3Q8IZD9 2030 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 H7C0C1 242 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 NVLO15381 856 aaKnown RBP11.03□□□□□ -0.64
SMC3-201ENST00000361804 INHBAP08476 426 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 UBTFL6P0CB48 400 aaPredicted RBP11.03□□□□□ -0.64
SMC3-201ENST00000361804 ESRRAP11474 423 aaPredicted RBP11.03□□□□□ -0.64
SMC3-201ENST00000361804 ATP6V1C1P21283 382 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 NAMPTP43490 491 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 ATP5OP48047 213 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 ALDH18A1P54886 795 aaKnown RBP11.03□□□□□ -0.64
SMC3-201ENST00000361804 UBAP2LQ14157 1087 aaKnown RBP11.03□□□□□ -0.64
SMC3-201ENST00000361804 LRRC36Q1X8D7 754 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 CCDC110Q8TBZ0 833 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 SKA1Q96BD8 255 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 FAF2Q96CS3 445 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 WRNIP1Q96S55 665 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 SRPK1Q96SB4 655 aaKnown RBP11.03□□□□□ -0.64
SMC3-201ENST00000361804 XYLT2Q9H1B5 865 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 CORO1CQ9ULV4 474 aaPredicted RBP11.03□□□□□ -0.64
SMC3-201ENST00000361804 DNAH14Q0VDD8 3507 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 SOWAHBA6NEL2 793 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 DCAF8L1A6NGE4 600 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 SPATA31C2B4DYI2 1134 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 SERPINB4P48594 390 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 CCNG1P51959 295 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 TARBP2Q15633 366 aaKnown RBP11.03□□□□□ -0.64
SMC3-201ENST00000361804 MROH9Q5TGP6 573 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 C16orf46Q6P387 395 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 MAMDC4Q6UXC1 1216 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 XYLT1Q86Y38 959 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 BRSK2Q8IWQ3 736 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 C12orf29Q8N999 325 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 ZNF333Q96JL9 665 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 ACSS2Q9NR19 701 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 PCMTD2Q9NV79 361 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 SENP1Q9P0U3 644 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 PPARGC1AQ9UBK2 798 aaKnown RBP11.03□□□□□ -0.64
SMC3-201ENST00000361804 RALGAPA2Q2PPJ7 1873 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 MSCO60682 206 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 LYPLA1O75608 230 aaPredicted RBP11.03□□□□□ -0.64
SMC3-201ENST00000361804 ATP5HO75947 161 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms