RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 MRNIPQ6NTE8 343 aa19.24■□□□□ 0.67
CLIP2-202ENST00000361545 GPR142Q7Z601 462 aa19.24■□□□□ 0.67
CLIP2-202ENST00000361545 FBXL16Q8N461 479 aa19.24■□□□□ 0.67
CLIP2-202ENST00000361545 SRPK1Q96SB4 655 aaKnown RBP19.24■□□□□ 0.67
CLIP2-202ENST00000361545 TMEM121Q9BTD3 319 aa19.24■□□□□ 0.67
CLIP2-202ENST00000361545 SPATA16Q9BXB7 569 aa19.24■□□□□ 0.67
CLIP2-202ENST00000361545 C5orf58C9J3I9 102 aa19.24■□□□□ 0.67
CLIP2-202ENST00000361545 RECQL4O94761 1208 aa19.24■□□□□ 0.67
CLIP2-202ENST00000361545 AXLP30530 894 aa19.24■□□□□ 0.67
CLIP2-202ENST00000361545 IFNEQ86WN2 208 aa19.24■□□□□ 0.67
CLIP2-202ENST00000361545 DPP7Q9UHL4 492 aa19.24■□□□□ 0.67
CLIP2-202ENST00000361545 GRID1Q9ULK0 1009 aa19.24■□□□□ 0.67
CLIP2-202ENST00000361545 ANKRD63C9JTQ0 380 aa19.24■□□□□ 0.67
CLIP2-202ENST00000361545 PROSCO94903 275 aa19.24■□□□□ 0.67
CLIP2-202ENST00000361545 MDH1P40925 334 aaKnown RBP19.24■□□□□ 0.67
CLIP2-202ENST00000361545 RNF168Q8IYW5 571 aaPredicted RBP19.24■□□□□ 0.67
CLIP2-202ENST00000361545 ADAM32Q8TC27 787 aa19.24■□□□□ 0.67
CLIP2-202ENST00000361545 SLC2A14Q8TDB8 520 aa19.24■□□□□ 0.67
CLIP2-202ENST00000361545 BRD8Q9H0E9 1235 aa19.24■□□□□ 0.67
CLIP2-202ENST00000361545 IPPQ9Y573 584 aa19.24■□□□□ 0.67
CLIP2-202ENST00000361545 SCNN1BP51168 640 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 ABCE1P61221 599 aaKnown RBP19.23■□□□□ 0.67
CLIP2-202ENST00000361545 SLC39A12Q504Y0 691 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 LVRNQ6Q4G3 990 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 LRIG3Q6UXM1 1119 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 KCNV2Q8TDN2 545 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 OTULINQ96BN8 352 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 CCDC90BQ9GZT6 254 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 NFASCO94856 1347 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 A0A087X0B3 334 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 TMEM120BA0PK00 339 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 SYCE1LA8MT33 242 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 MAPK7Q13164 816 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 NFIL3Q16649 462 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 SPOCD1Q6ZMY3 1216 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 BRSK2Q8IWQ3 736 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 TAGAPQ8N103 731 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 MRPL9Q9BYD2 267 aaKnown RBP19.23■□□□□ 0.67
CLIP2-202ENST00000361545 BLOC1S4Q9NUP1 217 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 SYNCRIPO60506 623 aaKnown RBP19.23■□□□□ 0.67
CLIP2-202ENST00000361545 CYP3A4P08684 503 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 CCR1P32246 355 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 POU4F1Q01851 419 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 UBXN6Q9BZV1 441 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 TSPYL2Q9H2G4 693 aaPredicted RBP19.23■□□□□ 0.67
CLIP2-202ENST00000361545 WWOXQ9NZC7 414 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 PPP1R37O75864 691 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 ENO3P13929 434 aaPredicted RBP19.23■□□□□ 0.67
CLIP2-202ENST00000361545 PBLDP30039 288 aaPredicted RBP19.23■□□□□ 0.67
CLIP2-202ENST00000361545 GJC2Q5T442 439 aaPredicted RBP19.23■□□□□ 0.67
CLIP2-202ENST00000361545 SCUBE3Q8IX30 993 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 ARHGAP20Q9P2F6 1191 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 WARS2Q9UGM6 360 aaKnown RBP19.23■□□□□ 0.67
CLIP2-202ENST00000361545 TRAF3IP3Q9Y228 551 aa19.23■□□□□ 0.67
CLIP2-202ENST00000361545 SPTLC1O15269 473 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 EPB42P16452 691 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 EVX2Q03828 476 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 FICDQ9BVA6 458 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 PHF20L1A8MW92 1017 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 SLC12A3P55017 1021 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 GEMIN4P57678 1058 aaKnown RBP19.22■□□□□ 0.67
CLIP2-202ENST00000361545 FIGNQ5HY92 759 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 CDKAL1Q5VV42 579 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 FBXO44Q9H4M3 255 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 LRRIQ3A6PVS8 624 aaPredicted RBP19.22■□□□□ 0.67
CLIP2-202ENST00000361545 ST3GAL1Q11201 340 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 TTLL9Q3SXZ7 439 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 OOSP2Q86WS3 158 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 SMARCD1Q96GM5 515 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 SGSM3Q96HU1 749 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 SHCBP1LQ9BZQ2 653 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 MLH1P40692 756 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 SCNN1GP51170 649 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 CCL23P55773 120 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 SH3BGRP55822 239 aaPredicted RBP19.22■□□□□ 0.67
CLIP2-202ENST00000361545 TBX4P57082 545 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 DDX39BQ13838 428 aaKnown RBP19.22■□□□□ 0.67
CLIP2-202ENST00000361545 IKBKEQ14164 716 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 ARMC2Q8NEN0 867 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 LACRTQ9GZZ8 138 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 VPS9D1Q9Y2B5 631 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 HES2Q9Y543 173 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 NCF1BA6NI72 391 aaPredicted RBP19.22■□□□□ 0.67
CLIP2-202ENST00000361545 NCF1CA8MVU1 366 aaPredicted RBP19.22■□□□□ 0.67
CLIP2-202ENST00000361545 NCF1P14598 390 aaPredicted RBP19.22■□□□□ 0.67
CLIP2-202ENST00000361545 WASHC5Q12768 1159 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 FAM83EQ2M2I3 478 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 FBXO36Q8NEA4 188 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 CEP41Q9BYV8 373 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 PPCSQ9HAB8 311 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 NOP53Q9NZM5 478 aaKnown RBP19.22■□□□□ 0.67
CLIP2-202ENST00000361545 SYNPO2Q9UMS6 1093 aa19.22■□□□□ 0.67
CLIP2-202ENST00000361545 SLC15A5A6NIM6 579 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 MICAL2O94851 1124 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 MMGT1Q8N4V1 131 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 ZIM3Q96PE6 472 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 FRMD8Q9BZ67 464 aaPredicted RBP19.21■□□□□ 0.67
CLIP2-202ENST00000361545 PORCNQ9H237 461 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 NRCAMQ92823 1304 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 GTPBP10A4D1E9 387 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms