RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 PFDN1O60925 122 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 DGKIO75912 1065 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 CCNE2O96020 404 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 TMTC4Q5T4D3 741 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 EXOC3L1Q86VI1 746 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 C12orf56Q8IXR9 622 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 SLC25A41Q8N5S1 370 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 URGCPQ8TCY9 931 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 PARK7Q99497 189 aaKnown RBP16.93■□□□□ 0.3
SCAF1-201ENST00000360565 SH3GL2Q99962 352 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 TMEM120AQ9BXJ8 343 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 ASB7Q9H672 318 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 NR2E1Q9Y466 385 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 DDX3YO15523 660 aaKnown RBP16.93■□□□□ 0.3
SCAF1-201ENST00000360565 GLRA3O75311 464 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 MMP14P50281 582 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 TAS2R40P59535 323 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 LRRC8EQ6NSJ5 796 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 KIRREL3Q8IZU9 778 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 TMEM237Q96Q45 408 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 SNTG2Q9NY99 539 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 COG5Q9UP83 839 aa16.93■□□□□ 0.3
SCAF1-201ENST00000360565 E5RI56 91 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 B3GAT3O94766 335 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 LYPLA2O95372 231 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 MCF2P10911 925 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 PPARGP37231 505 aaPredicted RBP16.92■□□□□ 0.3
SCAF1-201ENST00000360565 TMEM154Q6P9G4 183 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 NAT9Q9BTE0 207 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 KATNAL1Q9BW62 490 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 WDCPQ9H6R7 721 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 SETD4Q9NVD3 440 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 TJP2Q9UDY2 1190 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 E5RJQ4 531 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 TCN1P20061 433 aaPredicted RBP16.92■□□□□ 0.3
SCAF1-201ENST00000360565 KCNA3P22001 575 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 TNFSF9P41273 254 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 RASA2Q15283 850 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 CNGA3Q16281 694 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 ASTE1Q2TB18 679 aaPredicted RBP16.92■□□□□ 0.3
SCAF1-201ENST00000360565 TMEM259Q4ZIN3 620 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 CKAP2Q8WWK9 683 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 RMDN2Q96LZ7 410 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 SPON1Q9HCB6 807 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 PIH1D1Q9NWS0 290 aaKnown RBP16.92■□□□□ 0.3
SCAF1-201ENST00000360565 TCRBV7S2A1N4TA0A589 114 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 APOC4-APOC2K7ER74 178 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 PSMD3O43242 534 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 APOC2P02655 101 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 CETPP11597 493 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 DRD4P21917 467 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 COPAP53621 1224 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 FBXO47Q5MNV8 452 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 MFSD14CQ5VZR4 134 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 YTHDF3Q7Z739 585 aaKnown RBP16.92■□□□□ 0.3
SCAF1-201ENST00000360565 SLITRK1Q96PX8 696 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 TRIM15Q9C019 465 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 DLGAP2Q9P1A6 1054 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 COL1A1P02452 1464 aaPredicted RBP16.92■□□□□ 0.3
SCAF1-201ENST00000360565 PAEPP09466 180 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 KDELR1P24390 212 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 VHLP40337 213 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 RPL10AP62906 217 aaKnown RBP16.92■□□□□ 0.3
SCAF1-201ENST00000360565 CAPSQ13938 189 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 TEX9Q8N6V9 391 aa16.92■□□□□ 0.3
SCAF1-201ENST00000360565 ZNF75CPQ92670 426 aaPredicted RBP16.92■□□□□ 0.3
SCAF1-201ENST00000360565 TOPAZ1Q8N9V7 1692 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 PLIN4Q96Q06 1357 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 ENO4A6NNW6 628 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 CBX6O95503 412 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 FAAP100Q0VG06 881 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 MAPRE2Q15555 327 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 GTF3C2Q8WUA4 911 aaPredicted RBP16.91■□□□□ 0.3
SCAF1-201ENST00000360565 FHDC1Q9C0D6 1143 aaPredicted RBP16.91■□□□□ 0.3
SCAF1-201ENST00000360565 TMEM134Q9H6X4 195 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 DNAJC16Q9Y2G8 782 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 SRRM3A6NNA2 597 aaPredicted RBP16.91■□□□□ 0.3
SCAF1-201ENST00000360565 CYB561D2O14569 222 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 LIASO43766 372 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 DDNO94850 711 aaPredicted RBP16.91■□□□□ 0.3
SCAF1-201ENST00000360565 PTPN4P29074 926 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 TMEM132BQ14DG7 1078 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 PAN2Q504Q3 1202 aaKnown RBP16.91■□□□□ 0.3
SCAF1-201ENST00000360565 CNPY4Q8N129 248 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 MFSD14AQ96MC6 490 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 ZBTB18Q99592 522 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 BEGAINQ9BUH8 593 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 ASCC2Q9H1I8 757 aaPredicted RBP16.91■□□□□ 0.3
SCAF1-201ENST00000360565 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.91■□□□□ 0.3
SCAF1-201ENST00000360565 JAM2P57087 298 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 CCNJLQ8IV13 435 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 ADGRF2Q8IZF7 708 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 DCLRE1BQ9H816 532 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 ITGA11Q9UKX5 1188 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 ORC6Q9Y5N6 252 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 SLC4A7Q9Y6M7 1214 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 RGPD1P0DJD0 1748 aa16.91■□□□□ 0.3
SCAF1-201ENST00000360565 JCHAINP01591 159 aa16.9■□□□□ 0.3
SCAF1-201ENST00000360565 C15orf59Q2T9L4 293 aaPredicted RBP16.9■□□□□ 0.3
SCAF1-201ENST00000360565 ANO4Q32M45 955 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms