RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 SLC26A6Q9BXS9 759 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 ADNPQ9H2P0 1102 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 LRWD1Q9UFC0 647 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 FNDC3AQ9Y2H6 1198 aaKnown RBP6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 GDAQ9Y2T3 454 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 ABCA7Q8IZY2 2146 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 A0A1W2PR77 199 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 LHX1P48742 406 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 RPL6Q02878 288 aaKnown RBP6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 CYP4F3Q08477 520 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 RESTQ13127 1097 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 CCDC82Q8N4S0 544 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 FAM181AQ8N9Y4 354 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 PRR11Q96HE9 360 aaPredicted RBP6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 PIWIL1Q96J94 861 aaKnown RBP6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 PSMG3-AS1Q96PY0 264 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 NUP58Q9BVL2 599 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 VRTNQ9H8Y1 702 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 TMLHEQ9NVH6 421 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 NUB1Q9Y5A7 615 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 TIMM44O43615 452 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 NEMFO60524 1076 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 USO1O60763 962 aaKnown RBP6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 ITGB6P18564 788 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 ATP2B1P20020 1258 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 LSSP48449 732 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 TAF6P49848 677 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 AFF3P51826 1226 aaKnown RBP6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 PCBP4P57723 403 aaKnown RBP6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 UAP1L1Q3KQV9 507 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 SMYD5Q6GMV2 418 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 FMNL3Q8IVF7 1028 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 FAM174AQ8TBP5 190 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 WDR35Q9P2L0 1181 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 BPTFQ12830 3046 aa6.42□□□□□ -1.38
CDC42SE2-201ENST00000360515 ITIH6Q6UXX5 1313 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 LACTBL1A8MY62 500 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 ENC1O14682 589 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 BCAT2O15382 392 aaPredicted RBP6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 TRAK2O60296 914 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 ATXN8OSP0DMR3 200 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 MAPK8P45983 427 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 INHBCP55103 352 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 VAC14Q08AM6 782 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 TMEM119Q4V9L6 283 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 GLRA4Q5JXX5 417 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 ANO7Q6IWH7 933 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 METTL23Q86XA0 190 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 CPXM2Q8N436 756 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 SYT2Q8N9I0 419 aaPredicted RBP6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 ZNF560Q96MR9 790 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 SLC22A12Q96S37 553 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 TPSD1Q9BZJ3 242 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 SGK2Q9HBY8 427 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 POLR3BQ9NW08 1133 aaPredicted RBP6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 CDH9Q9ULB4 789 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 ANKRD11Q6UB99 2663 aaPredicted RBP6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 KIAA0391O15091 583 aaKnown RBP6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 ZIC2O95409 532 aaPredicted RBP6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 CTDNEP1O95476 244 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 LATS1O95835 1130 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 PRB1P04280 392 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 MYBP10242 640 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 XBP1P17861 261 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 CD27P26842 260 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 KRT2P35908 639 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 PLEKHG6Q3KR16 790 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 SLC39A12Q504Y0 691 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 TXNDC8Q6A555 127 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 MAB21L3Q8N8X9 362 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 CRELD1Q96HD1 420 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 LRRC2Q9BYS8 371 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 ITGA11Q9UKX5 1188 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 ZNF510Q9Y2H8 683 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 SLC12A3P55017 1021 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 DMP1Q13316 513 aaPredicted RBP6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 LINC00303Q3SY05 128 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 C2orf27AQ580R0 203 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 RINT1Q6NUQ1 792 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 SLC39A4Q6P5W5 647 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 FILIP1Q7Z7B0 1213 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 CDR2LQ86X02 465 aaPredicted RBP6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 CCDC97Q96F63 343 aaPredicted RBP6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 KDM4CQ9H3R0 1056 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 CSNK1G1Q9HCP0 422 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 PNPLA8Q9NP80 782 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 WNT6Q9Y6F9 365 aa6.41□□□□□ -1.38
CDC42SE2-201ENST00000360515 ARHGEF35A5YM69 484 aa6.4□□□□□ -1.38
CDC42SE2-201ENST00000360515 FDPSP14324 419 aaKnown RBP6.4□□□□□ -1.38
CDC42SE2-201ENST00000360515 ATXN3P54252 364 aaPredicted RBP6.4□□□□□ -1.38
CDC42SE2-201ENST00000360515 ARL13BQ3SXY8 428 aa6.4□□□□□ -1.38
CDC42SE2-201ENST00000360515 CRELD2Q6UXH1 353 aaPredicted RBP6.4□□□□□ -1.38
CDC42SE2-201ENST00000360515 USP37Q86T82 979 aa6.4□□□□□ -1.38
CDC42SE2-201ENST00000360515 BRF1Q92994 677 aa6.4□□□□□ -1.38
CDC42SE2-201ENST00000360515 LMLNQ96KR4 655 aa6.4□□□□□ -1.38
CDC42SE2-201ENST00000360515 HSPA12BQ96MM6 686 aa6.4□□□□□ -1.38
CDC42SE2-201ENST00000360515 KLF16Q9BXK1 252 aaPredicted RBP6.4□□□□□ -1.38
CDC42SE2-201ENST00000360515 TMEM245Q9H330 911 aa6.4□□□□□ -1.38
CDC42SE2-201ENST00000360515 SPHK2Q9NRA0 654 aa6.4□□□□□ -1.38
CDC42SE2-201ENST00000360515 SLC27A5Q9Y2P5 690 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms