RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 NUP93Q8N1F7 819 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 FBXO36Q8NEA4 188 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 CDCA5Q96FF9 252 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 FAM118BQ9BPY3 351 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 EFCAB1Q9HAE3 211 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 CYP3A43Q9HB55 503 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.64□□□□□ -0.39
DNMT1-202ENST00000359526 APPL1Q9UKG1 709 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 AP4S1Q9Y587 144 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 SLC30A1Q9Y6M5 507 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 PIK3C2AO00443 1686 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 VDRP11473 427 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 TPP2P29144 1249 aaPredicted RBP12.64□□□□□ -0.39
DNMT1-202ENST00000359526 RPS6P62753 249 aaKnown RBP12.64□□□□□ -0.39
DNMT1-202ENST00000359526 C6orf10Q5SRN2 563 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 KAZALD1Q96I82 304 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 TCRBV5S4A2TA0A5A2 114 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 SDR42E2A6NKP2 422 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 SERPINI2O75830 405 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 ZCCHC18P0CG32 403 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 KCNMA1Q12791 1236 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 DMC1Q14565 340 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 SMAD1Q15797 465 aaKnown RBP12.64□□□□□ -0.39
DNMT1-202ENST00000359526 AGAP9Q5VTM2 703 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 CLEC10AQ8IUN9 316 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 PI4K2AQ9BTU6 479 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.64□□□□□ -0.395e-6■■■□□ 17.4
DNMT1-202ENST00000359526 FBXO21O94952 628 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 RAP1GDS1P52306 607 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 GEMP55040 296 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 SMTNL2Q2TAL5 461 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 ANKS3Q6ZW76 656 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 SLC26A11Q86WA9 606 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 TBC1D19Q8N5T2 526 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 FBXO25Q8TCJ0 367 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 PACSIN1Q9BY11 444 aa12.64□□□□□ -0.39
DNMT1-202ENST00000359526 SRRM3A6NNA2 597 aaPredicted RBP12.63□□□□□ -0.39
DNMT1-202ENST00000359526 SUPT3HB4E1H0 165 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 OGTO15294 1046 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 RPL10AP62906 217 aaKnown RBP12.63□□□□□ -0.39
DNMT1-202ENST00000359526 DDR1Q08345 913 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 GNASQ5JWF2 1037 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 EFCAB12Q6NXP0 572 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 GANCQ8TET4 914 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 AENQ8WTP8 325 aaKnown RBP12.63□□□□□ -0.39
DNMT1-202ENST00000359526 CASP10Q92851 521 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 FAM162AQ96A26 154 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 UROC1Q96N76 676 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 CGRRF1Q99675 332 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 SIKE1Q9BRV8 207 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 AFF4Q9UHB7 1163 aaKnown RBP12.63□□□□□ -0.39
DNMT1-202ENST00000359526 HAO1Q9UJM8 370 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 NFASCO94856 1347 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 PDHXO00330 501 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 AP1G2O75843 785 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 SOAT2O75908 522 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 GLI1P08151 1106 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 SERPINB1P30740 379 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 ZNF720Q7Z2F6 126 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 DDHD1Q8NEL9 900 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 SH3KBP1Q96B97 665 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 GDF3Q9NR23 364 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 RRN3Q9NYV6 651 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 SLC39A10Q9ULF5 831 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 ADGRA3Q8IWK6 1321 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 RSPH10B2B2RC85 870 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 CA12O43570 354 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 RSPH10BP0C881 870 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 PSMA4P25789 261 aaKnown RBP12.63□□□□□ -0.39
DNMT1-202ENST00000359526 TCF7P36402 384 aaPredicted RBP12.63□□□□□ -0.39
DNMT1-202ENST00000359526 GNL1P36915 607 aaPredicted RBP12.63□□□□□ -0.39
DNMT1-202ENST00000359526 CPA2P48052 419 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 ZNF135P52742 658 aaPredicted RBP12.63□□□□□ -0.39
DNMT1-202ENST00000359526 CCDC85BQ15834 202 aaPredicted RBP12.63□□□□□ -0.39
DNMT1-202ENST00000359526 FOXR1Q6PIV2 292 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 TRIM69Q86WT6 500 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 SLC7A14Q8TBB6 771 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 FOPNLQ96NB1 174 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 SH2D3AQ9BRG2 576 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 DYRK4Q9NR20 520 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 CD274Q9NZQ7 290 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 MPP6Q9NZW5 540 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 C5orf58C9J3I9 102 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 M0R3G1 203 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 PKN1Q16512 942 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 CLEC16AQ2KHT3 1053 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 SPOCD1Q6ZMY3 1216 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 USP33Q8TEY7 942 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 CNDP1Q96KN2 507 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 PRPF18Q99633 342 aaKnown RBP12.63□□□□□ -0.39
DNMT1-202ENST00000359526 CNPY3Q9BT09 278 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 TARS2Q9BW92 718 aaKnown RBP12.63□□□□□ -0.39
DNMT1-202ENST00000359526 UBE2OQ9C0C9 1292 aaKnown RBP12.63□□□□□ -0.39
DNMT1-202ENST00000359526 GIMAP4Q9NUV9 329 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 SOX13Q9UN79 622 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 SHOC2Q9UQ13 582 aa12.63□□□□□ -0.39
DNMT1-202ENST00000359526 AAR2Q9Y312 384 aaKnown RBP12.63□□□□□ -0.39
DNMT1-202ENST00000359526 RIC1Q4ADV7 1423 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 LOC100653049A0A140TA62 436 aa12.62□□□□□ -0.39
DNMT1-202ENST00000359526 PIK3CDO00329 1044 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms