RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 PODXLO00592 558 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 PAPSS1O43252 624 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-202ENST00000359366 KPNA6O60684 536 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 HUS1O60921 280 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 LRCH4O75427 683 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 KRT14P02533 472 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 THP07101 528 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 ZSCAN5DPP0CG00 497 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 CKBP12277 381 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 GRK4P32298 578 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 COILP38432 576 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-202ENST00000359366 GATMP50440 423 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 CACNA2D1P54289 1103 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 EPHB4P54760 987 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 TUBB4BP68371 445 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 PITX1P78337 314 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-202ENST00000359366 DHX9Q08211 1270 aaKnown RBP5.33□□□□□ -1.56
ATXN3-202ENST00000359366 TRIM71Q2Q1W2 868 aaKnown RBP5.33□□□□□ -1.56
ATXN3-202ENST00000359366 MDH1BQ5I0G3 518 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 SCYL2Q6P3W7 929 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 LCLAT1Q6UWP7 414 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 SDCCAG8Q86SQ7 713 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-202ENST00000359366 RTN4RL1Q86UN2 441 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-202ENST00000359366 RXFP2Q8WXD0 754 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 VCPIP1Q96JH7 1222 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 SENP8Q96LD8 212 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 GLT1D1Q96MS3 346 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 TMEM209Q96SK2 561 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 OSBPL8Q9BZF1 889 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 LHX5Q9H2C1 402 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 TMPRSS4Q9NRS4 437 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 VPS18Q9P253 973 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 IP6K2Q9UHH9 426 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 TTC7AQ9ULT0 858 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-202ENST00000359366 FAN1Q9Y2M0 1017 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 TDRD15B5MCY1 1934 aaKnown RBP5.33□□□□□ -1.56
ATXN3-202ENST00000359366 CEP290O15078 2479 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 SCN5AQ14524 2016 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 A0A087WUV0 522 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-202ENST00000359366 MYBPHLA2RUH7 354 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 CCDC188H7C350 402 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 B3GAT3O94766 335 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 SYF2O95926 243 aaKnown RBP5.33□□□□□ -1.56
ATXN3-202ENST00000359366 CD4P01730 458 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 FAM163BP0C2L3 166 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 PDGFRAP16234 1089 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 MIPP30301 263 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 PBX3P40426 434 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 SLC1A1P43005 524 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 MNAT1P51948 309 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 KRT17Q04695 432 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 IFRD2Q12894 506 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-202ENST00000359366 PPP1R7Q15435 360 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 TIGD5Q53EQ6 642 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 GLE1Q53GS7 698 aaKnown RBP5.33□□□□□ -1.56
ATXN3-202ENST00000359366 XKR4Q5GH76 650 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 HP1BP3Q5SSJ5 553 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-202ENST00000359366 SYCP2LQ5T4T6 812 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 KCTD16Q68DU8 428 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 CCDC25Q86WR0 208 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 NT5DC4Q86YG4 428 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 ZNF280BQ86YH2 543 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 LRRC52Q8N7C0 313 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 PCSK9Q8NBP7 692 aaKnown RBP5.33□□□□□ -1.56
ATXN3-202ENST00000359366 FBXO25Q8TCJ0 367 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 MIPOL1Q8TD10 442 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 LINC01599Q8WXQ3 324 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 B3GALT6Q96L58 329 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 ZIM3Q96PE6 472 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 SLITRK1Q96PX8 696 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 KCNK16Q96T55 309 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 MED10Q9BTT4 135 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 CENPHQ9H3R5 247 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 SLITRK6Q9H5Y7 841 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 NGRNQ9NPE2 291 aaKnown RBP5.33□□□□□ -1.56
ATXN3-202ENST00000359366 CRTAC1Q9NQ79 661 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 STARD7Q9NQZ5 370 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 DERAQ9Y315 318 aa5.33□□□□□ -1.56
ATXN3-202ENST00000359366 UTP11Q9Y3A2 253 aaKnown RBP5.33□□□□□ -1.56
ATXN3-202ENST00000359366 MYO18AQ92614 2054 aaKnown RBP5.32□□□□□ -1.56
ATXN3-202ENST00000359366 FSCN2O14926 492 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 GPR182O15218 404 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 PQBP1O60828 265 aaKnown RBP5.32□□□□□ -1.56
ATXN3-202ENST00000359366 OR4Q2P0C623 313 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 NAT1P18440 290 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 MCM3P25205 808 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 HOXD10P28358 340 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 ACTN2P35609 894 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 MAP3K7CLP57077 242 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 SLC25A11Q02978 314 aaKnown RBP5.32□□□□□ -1.56
ATXN3-202ENST00000359366 CAMK2BQ13554 666 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 DSG2Q14126 1118 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 UAP1Q16222 522 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-202ENST00000359366 CA9Q16790 459 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 TCTN1Q2MV58 587 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 TBC1D25Q3MII6 688 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 CCDC14Q49A88 953 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 PKDCCQ504Y2 493 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 ODF2Q5BJF6 829 aa5.32□□□□□ -1.56
ATXN3-202ENST00000359366 DUPD1Q68J44 220 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms