RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 KLF1Q13351 362 aaPredicted RBP6.84□□□□□ -1.32
CSDE1-203ENST00000358528 SLC26A11Q86WA9 606 aa6.84□□□□□ -1.32
CSDE1-203ENST00000358528 CEP120Q8N960 986 aa6.84□□□□□ -1.32
CSDE1-203ENST00000358528 DNAAF3Q8N9W5 541 aa6.84□□□□□ -1.32
CSDE1-203ENST00000358528 ANKLE1Q8NAG6 615 aa6.84□□□□□ -1.32
CSDE1-203ENST00000358528 CEP70Q8NHQ1 597 aa6.84□□□□□ -1.32
CSDE1-203ENST00000358528 SREK1Q8WXA9 508 aaKnown RBP6.84□□□□□ -1.32
CSDE1-203ENST00000358528 CDKL2Q92772 493 aa6.84□□□□□ -1.32
CSDE1-203ENST00000358528 CGRRF1Q99675 332 aa6.84□□□□□ -1.32
CSDE1-203ENST00000358528 RPF1Q9H9Y2 349 aaKnown RBP6.84□□□□□ -1.32
CSDE1-203ENST00000358528 UGT1A7Q9HAW7 530 aa6.84□□□□□ -1.32
CSDE1-203ENST00000358528 UGT1A10Q9HAW8 530 aa6.84□□□□□ -1.32
CSDE1-203ENST00000358528 UGT1A8Q9HAW9 530 aa6.84□□□□□ -1.32
CSDE1-203ENST00000358528 RNF19AQ9NV58 838 aa6.84□□□□□ -1.32
CSDE1-203ENST00000358528 NR2E3Q9Y5X4 410 aa6.84□□□□□ -1.32
CSDE1-203ENST00000358528 DLEC1Q9Y238 1755 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 CLUHO75153 1309 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 PHLPP1O60346 1717 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 GOLGA8QA0A0J9YX86 632 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 GOLGA8OA6NCC3 632 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 GOLGA8NF8WBI6 632 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 WDR46O15213 610 aaKnown RBP6.83□□□□□ -1.32
CSDE1-203ENST00000358528 ADCY3O60266 1144 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 PEX10O60683 326 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 VNN1O95497 513 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 PRKCBP05771 671 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 C6orf222P0C671 652 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-203ENST00000358528 RBL1P28749 1068 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 MSX2P35548 267 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-203ENST00000358528 CDKN2BP42772 138 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 EFHC2Q5JST6 749 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 LPCAT4Q643R3 524 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 CIAPIN1Q6FI81 312 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.83□□□□□ -1.32
CSDE1-203ENST00000358528 TRIM50Q86XT4 487 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 TMPRSS6Q8IU80 811 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 HACE1Q8IYU2 909 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 GSDMBQ8TAX9 411 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 SH3TC2Q8TF17 1288 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 PRPF31Q8WWY3 499 aaKnown RBP6.83□□□□□ -1.32
CSDE1-203ENST00000358528 ZNF333Q96JL9 665 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 MMP19Q99542 508 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 FERMT1Q9BQL6 677 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 PRM3Q9NNZ6 103 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 IL1RAPL1Q9NZN1 696 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 COQ4Q9Y3A0 265 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 E7ENQ6 273 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 E9PBE3 544 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 TP73O15350 636 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 KLHL41O60662 606 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 TCEA3O75764 348 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 PGM3O95394 542 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 C4BPAP04003 597 aaKnown RBP6.83□□□□□ -1.32
CSDE1-203ENST00000358528 PROCP04070 461 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 CYP1A1P04798 512 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-203ENST00000358528 GSTT1P30711 240 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 PHF13Q86YI8 300 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-203ENST00000358528 TMEM130Q8N3G9 435 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 TFAP2BQ92481 460 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 PGBD4Q96DM1 585 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 MRPL4Q9BYD3 311 aaKnown RBP6.83□□□□□ -1.32
CSDE1-203ENST00000358528 TAGLN3Q9UI15 199 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 KCNG1Q9UIX4 513 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 ZNF541Q9H0D2 1346 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 APOL1O14791 398 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 RGL2O15211 777 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 ITGB3P05106 788 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 ITGAVP06756 1048 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 GJB1P08034 283 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 ANPEPP15144 967 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 LAMB3Q13751 1172 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 CYTH1Q15438 398 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 PTPN20Q4JDL3 420 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 DNAL1Q4LDG9 190 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 TNFAIP8L3Q5GJ75 292 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 SH3PXD2AQ5TCZ1 1133 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 OLFML2BQ68BL8 750 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 SCARA3Q6AZY7 606 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 PPP1R2P3Q6NXS1 205 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 RSBN1LQ6PCB5 846 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-203ENST00000358528 IGDCC3Q8IVU1 814 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 DCLK2Q8N568 766 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 ICA1LQ8NDH6 482 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 DENND1AQ8TEH3 1009 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 RXFP2Q8WXD0 754 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 WRNIP1Q96S55 665 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 ANLNQ9NQW6 1124 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 XPNPEP1Q9NQW7 623 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 MAN1C1Q9NR34 630 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 HESX1Q9UBX0 185 aa6.83□□□□□ -1.32
CSDE1-203ENST00000358528 TYROBPO43914 113 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 LRCH4O75427 683 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 F7P08709 466 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-203ENST00000358528 ENO3P13929 434 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-203ENST00000358528 IL1R2P27930 398 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 GCAP28676 217 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 SDC4P31431 198 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 STAT5BP51692 787 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 TAP1Q03518 808 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 AP1B1Q10567 949 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms