RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 TRIM9Q9C026 710 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 WDR35Q9P2L0 1181 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 ASS1P00966 412 aaKnown RBP11.54□□□□□ -0.56
COL11A1-202ENST00000358392 PUDPQ08623 228 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 PLCL1Q15111 1095 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 NAPEPLDQ6IQ20 393 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 CAPSLQ8WWF8 208 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 RAD21L1Q9H4I0 556 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 UBP1Q9NZI7 540 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 PSMD11O00231 422 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 LTFP02788 710 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 IL6P05231 212 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 ITGA3P26006 1051 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 SV2CQ496J9 727 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 AGKQ53H12 422 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 WDR19Q8NEZ3 1342 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 ABCA5Q8WWZ7 1642 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 GPATCH2LQ9NWQ4 482 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 PCDHB7Q9Y5E2 793 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 ABCC2Q92887 1545 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 A0A087X0T9 212 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 ERI2A8K979 691 aaKnown RBP11.54□□□□□ -0.56
COL11A1-202ENST00000358392 DYNC1LI2O43237 492 aaPredicted RBP11.54□□□□□ -0.56
COL11A1-202ENST00000358392 MAPK9P45984 424 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 NPEPPSP55786 919 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 KCNB1Q14721 858 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 STARD3Q14849 445 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 STRA8Q7Z7C7 330 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 TMEM237Q96Q45 408 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 CENPXA8MT69 81 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 HS6ST1O60243 411 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 HALP42357 657 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 CSHL1Q14406 222 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 EFCAB12Q6NXP0 572 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 TAF2Q6P1X5 1199 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 EFL1Q7Z2Z2 1120 aaKnown RBP11.54□□□□□ -0.56
COL11A1-202ENST00000358392 PHF21BQ96EK2 531 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 SERPINB12Q96P63 405 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 VPS33BQ9H267 617 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 RIBC2Q9H4K1 309 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 PIH1D1Q9NWS0 290 aaKnown RBP11.54□□□□□ -0.56
COL11A1-202ENST00000358392 ERVV-1B6SEH8 477 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 SH3BGRLO75368 114 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 ATP6V1G2O95670 118 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 PIK3R1P27986 724 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 WEE1P30291 646 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 CCNG1P51959 295 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 CACNA2D1P54289 1103 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 GRIK3Q13003 919 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 DEFB107AQ8IZN7 70 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 TERB1Q8NA31 727 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 CEP44Q9C0F1 390 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 OSGEPL1Q9H4B0 414 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 VCPKMTQ9H867 229 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 ENTPD7Q9NQZ7 604 aa11.54□□□□□ -0.56
COL11A1-202ENST00000358392 PZPP20742 1482 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 GLRA3O75311 464 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 RPS6KA5O75582 802 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 KLRC1P26715 233 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 CENPCQ03188 943 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 POLD3Q15054 466 aaPredicted RBP11.53□□□□□ -0.56
COL11A1-202ENST00000358392 NDUFA5Q16718 116 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 KBTBD12Q3ZCT8 623 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 PHACTR4Q8IZ21 702 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 HPDLQ96IR7 371 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 TEX13BQ9BXU2 312 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 KDM5DQ9BY66 1539 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 GSG1L2A8MUP6 293 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 SPAG6O75602 509 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 GYPCP04921 128 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 ERVK-10P10266 1014 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 PEX5P50542 639 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 RALGDSQ12967 914 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 ITIH4Q14624 930 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 PKN2Q16513 984 aaKnown RBP11.53□□□□□ -0.56
COL11A1-202ENST00000358392 SPPL2AQ8TCT8 520 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 GDPD5Q8WTR4 605 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 CELF1Q92879 486 aaKnown RBP11.53□□□□□ -0.56
COL11A1-202ENST00000358392 RPAP1Q9BWH6 1393 aaPredicted RBP11.53□□□□□ -0.56
COL11A1-202ENST00000358392 SGPL1O95470 568 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 C6orf222P0C671 652 aaPredicted RBP11.53□□□□□ -0.56
COL11A1-202ENST00000358392 SLC2A4P14672 509 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 GTF2E2P29084 291 aaKnown RBP11.53□□□□□ -0.56
COL11A1-202ENST00000358392 POMGNT2Q8NAT1 580 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 KATNAL1Q9BW62 490 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 DGCR6LQ9BY27 220 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 RSPH9Q9H1X1 276 aaPredicted RBP11.53□□□□□ -0.56
COL11A1-202ENST00000358392 PIM2Q9P1W9 311 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 RRN3P2A6NIE6 340 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 FAM47E-STBD1D6RA91 191 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 TEX28O15482 410 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 MAP3K13O43283 966 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 CLTBP09497 229 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 CLVS1Q8IUQ0 354 aaPredicted RBP11.53□□□□□ -0.56
COL11A1-202ENST00000358392 CYP4Z2PQ8N1L4 340 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 ADI1Q9BV57 179 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 SH3BP4Q9P0V3 963 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 TBC1D12O60347 775 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 SERPINH1P50454 418 aaKnown RBP11.53□□□□□ -0.56
COL11A1-202ENST00000358392 STK4Q13043 487 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms