RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 ARHGEF19Q8IW93 802 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 MCEEQ96PE7 176 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 KLF6Q99612 283 aaPredicted RBP13.27□□□□□ -0.29
SMC4-202ENST00000357388 TRIM39Q9HCM9 518 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 CRNNQ9UBG3 495 aaPredicted RBP13.27□□□□□ -0.29
SMC4-202ENST00000357388 TSR3Q9UJK0 312 aaKnown RBP13.27□□□□□ -0.29
SMC4-202ENST00000357388 AGAP1Q9UPQ3 857 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 MEI4A8MW99 385 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 DYNC1LI2O43237 492 aaPredicted RBP13.27□□□□□ -0.29
SMC4-202ENST00000357388 PEX1O43933 1283 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 STAG3L1P0CL83 205 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 AKR1B1P15121 316 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 TKTP29401 623 aaKnown RBP13.27□□□□□ -0.29
SMC4-202ENST00000357388 PTPN7P35236 360 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 RFC5P40937 340 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 IL5RAQ01344 420 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 TMEM132DQ14C87 1099 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 SV2CQ496J9 727 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 TMEM63BQ5T3F8 832 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 EID3Q8N140 333 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 ACTRT1Q8TDG2 376 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 UCMAQ8WVF2 138 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 AGAP3Q96P47 875 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 ZSWIM1Q9BR11 485 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 C6orf62Q9GZU0 229 aaPredicted RBP13.27□□□□□ -0.29
SMC4-202ENST00000357388 VTI1BQ9UEU0 232 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 TBX3O15119 743 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 ALDH1A3P47895 512 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 SLC16A1P53985 500 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 MROH9Q5TGP6 573 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 IL31Q6EBC2 164 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 TSHZ1Q6ZSZ6 1077 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 SIRT2Q8IXJ6 389 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 KCTD14Q9BQ13 255 aaPredicted RBP13.26□□□□□ -0.29
SMC4-202ENST00000357388 METTL5Q9NRN9 209 aaKnown RBP13.26□□□□□ -0.29
SMC4-202ENST00000357388 BTBD3Q9Y2F9 522 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 IL18RAPO95256 599 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 RBP1P09455 135 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 ALOX12P18054 663 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 GPD1P21695 349 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 ROR2Q01974 943 aaKnown RBP13.26□□□□□ -0.29
SMC4-202ENST00000357388 SPDYCQ5MJ68 293 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 MTDHQ86UE4 582 aaKnown RBP13.26□□□□□ -0.29
SMC4-202ENST00000357388 ZNF669Q96BR6 464 aaPredicted RBP13.26□□□□□ -0.29
SMC4-202ENST00000357388 SRRM3A6NNA2 597 aaPredicted RBP13.26□□□□□ -0.29
SMC4-202ENST00000357388 CLOCKO15516 846 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 GYPCP04921 128 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 ALOX5P09917 674 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 RBP3P10745 1247 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 FMR1Q06787 632 aaKnown RBP eCLIP13.26□□□□□ -0.293e-7■□□□□ 10
SMC4-202ENST00000357388 WDR72Q3MJ13 1102 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 ATP6AP1LQ52LC2 224 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 PAPD7Q5XG87 772 aaKnown RBP13.26□□□□□ -0.29
SMC4-202ENST00000357388 MZT2AQ6P582 158 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 ZNF513Q8N8E2 541 aaPredicted RBP13.26□□□□□ -0.29
SMC4-202ENST00000357388 S100ZQ8WXG8 99 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 CELF4Q9BZC1 486 aaKnown RBP13.26□□□□□ -0.29
SMC4-202ENST00000357388 KLHL11Q9NVR0 708 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 GTF3C4Q9UKN8 822 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 FAM220BPB1ANY3 271 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 YWHABP31946 246 aaKnown RBP13.26□□□□□ -0.29
SMC4-202ENST00000357388 AQP5P55064 265 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 OVGP1Q12889 678 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 NFIL3Q16649 462 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 ARMCX6Q7L4S7 300 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 TPCN2Q8NHX9 752 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 FEZF2Q8TBJ5 459 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 USP33Q8TEY7 942 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 PNKPQ96T60 521 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 ZNF184Q99676 751 aaPredicted RBP13.26□□□□□ -0.29
SMC4-202ENST00000357388 AGPAT5Q9NUQ2 364 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 STX11O75558 287 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 ALOX15P16050 662 aaPredicted RBP13.26□□□□□ -0.29
SMC4-202ENST00000357388 GEMP55040 296 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 SLC22A9Q8IVM8 553 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 AHI1Q8N157 1196 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 ANKRD49Q8WVL7 239 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 USP13Q92995 863 aaPredicted RBP13.26□□□□□ -0.29
SMC4-202ENST00000357388 SLITRK1Q96PX8 696 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 DNAJC7Q99615 494 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 SPACA6W5XKT8 324 aa13.26□□□□□ -0.29
SMC4-202ENST00000357388 KDM5CP41229 1560 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 ALDH6A1Q02252 535 aaKnown RBP13.25□□□□□ -0.29
SMC4-202ENST00000357388 TRIM48Q8IWZ4 208 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 CCDC33Q8N5R6 958 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 ATG16L2Q8NAA4 619 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 UBASH3BQ8TF42 649 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 DDX20Q9UHI6 824 aaKnown RBP13.25□□□□□ -0.29
SMC4-202ENST00000357388 DNAJC16Q9Y2G8 782 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 SNX9Q9Y5X1 595 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 PRAMEF22A3QJZ6 481 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 RRN3P2A6NIE6 340 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 CD3EAPO15446 510 aaKnown RBP13.25□□□□□ -0.29
SMC4-202ENST00000357388 CYP2C8P10632 490 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 CETPP11597 493 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 HARS2P49590 506 aaKnown RBP13.25□□□□□ -0.29
SMC4-202ENST00000357388 ITGB3BPQ13352 177 aaPredicted RBP13.25□□□□□ -0.29
SMC4-202ENST00000357388 CRELD2Q6UXH1 353 aaPredicted RBP13.25□□□□□ -0.29
SMC4-202ENST00000357388 REXO1L1PQ8IX06 675 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 MOSPD2Q8NHP6 518 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms