RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 FEZF2Q8TBJ5 459 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 TMEM176AQ96HP8 235 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 HNRNPABQ99729 332 aaKnown RBP4.21□□□□□ -1.74
CNOT4-202ENST00000356162 LPIN3Q9BQK8 851 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 CORO1BQ9BR76 489 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 TTLL2Q9BWV7 592 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 LRRC3Q9BY71 257 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 ZNF518BQ9C0D4 1074 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 DMAP1Q9NPF5 467 aaPredicted RBP4.21□□□□□ -1.74
CNOT4-202ENST00000356162 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.21□□□□□ -1.749e-8■■■■■ 98.4
CNOT4-202ENST00000356162 FANCLQ9NW38 375 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 HCFC1R1Q9NWW0 138 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 CEP72Q9P209 647 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 APEX2Q9UBZ4 518 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 CDH22Q9UJ99 828 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 CDH7Q9ULB5 785 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 ZNF638Q14966 1978 aaKnown RBP4.21□□□□□ -1.74
CNOT4-202ENST00000356162 COL4A2P08572 1712 aa4.21□□□□□ -1.74
CNOT4-202ENST00000356162 ANAPC1Q9H1A4 1944 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 BECN2A8MW95 431 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 SOAT2O75908 522 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 RTN3O95197 1032 aaPredicted RBP4.2□□□□□ -1.74
CNOT4-202ENST00000356162 FAM200BP0CF97 657 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 VDRP11473 427 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 CCDC130P13994 396 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 CEBPBP17676 345 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 PFKLP17858 780 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 ACO1P21399 889 aaKnown RBP4.2□□□□□ -1.74
CNOT4-202ENST00000356162 BDNFP23560 247 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 CYP2F1P24903 491 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 PON1P27169 355 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 GBP2P32456 591 aaPredicted RBP4.2□□□□□ -1.74
CNOT4-202ENST00000356162 GPR15P49685 360 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 ZNF165P49910 485 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 BCAT1P54687 386 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 RAD23BP54727 409 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 MFAP3P55082 362 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 LRMPQ12912 555 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 IQCB1Q15051 598 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 TAF12Q16514 161 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 MEA1Q16626 185 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 SLC5A9Q2M3M2 681 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 ARHGAP15Q53QZ3 475 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 SGO2Q562F6 1265 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 MTSS1LQ765P7 747 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 LYSMD3Q7Z3D4 306 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 CREBRFQ8IUR6 639 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 SCN4BQ8IWT1 228 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 FUKQ8N0W3 1084 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 RBBP8NLQ8NC74 664 aaPredicted RBP4.2□□□□□ -1.74
CNOT4-202ENST00000356162 SHKBP1Q8TBC3 707 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 OVCA2Q8WZ82 227 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 NXPE3Q969Y0 559 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 KREMEN1Q96MU8 473 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 MYADMQ96S97 322 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 LSM14BQ9BX40 385 aaKnown RBP4.2□□□□□ -1.74
CNOT4-202ENST00000356162 HSD3B7Q9H2F3 369 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 CBX8Q9HC52 389 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 ZNF334Q9HCZ1 680 aaPredicted RBP4.2□□□□□ -1.74
CNOT4-202ENST00000356162 PNPLA8Q9NP80 782 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 SIX2Q9NPC8 291 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 PLCB1Q9NQ66 1216 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 FAM49BQ9NUQ9 324 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.2□□□□□ -1.74
CNOT4-202ENST00000356162 GDE1Q9NZC3 331 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 KIAA1257Q9ULG3 409 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 CNTN6Q9UQ52 1028 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 MRPS23Q9Y3D9 190 aaKnown RBP4.2□□□□□ -1.74
CNOT4-202ENST00000356162 PCDHB4Q9Y5E5 795 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 MYH10P35580 1976 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 NCANO14594 1321 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 A0A1W2PRU2 124 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 CLDN5O00501 218 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 PES1O00541 588 aaKnown RBP4.2□□□□□ -1.74
CNOT4-202ENST00000356162 MOSPD3O75425 235 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 SETSIPP0DME0 302 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 MYL4P12829 197 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 HMGA1P17096 107 aaKnown RBP4.2□□□□□ -1.74
CNOT4-202ENST00000356162 NPR3P17342 541 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 SLC9A1P19634 815 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 ADORA2BP29275 332 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 WEE1P30291 646 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 GPC1P35052 558 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 GRIK1P39086 918 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 PDE6CP51160 858 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 ORC1Q13415 861 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 HTR4Q13639 388 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 GOLGA7BQ2TAP0 167 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 HSP90AA4PQ58FG1 418 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 PHLDB3Q6NSJ2 640 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 LRSAM1Q6UWE0 723 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 PAQR9Q6ZVX9 377 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 APTXQ7Z2E3 356 aaKnown RBP4.2□□□□□ -1.74
CNOT4-202ENST00000356162 CYP2U1Q7Z449 544 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 DNAJB7Q7Z6W7 309 aaPredicted RBP4.2□□□□□ -1.74
CNOT4-202ENST00000356162 GJD3Q8N144 294 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 PDZD8Q8NEN9 1154 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 ITFG1Q8TB96 612 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 SLC2A14Q8TDB8 520 aa4.2□□□□□ -1.74
CNOT4-202ENST00000356162 GIPC2Q8TF65 315 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms