RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 ATG16L1Q676U5 607 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 TREML1Q86YW5 311 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 NETO2Q8NC67 525 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 DEPDC1BQ8WUY9 529 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 AKT1S1Q96B36 256 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 ANKRD27Q96NW4 1050 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 USP18Q9UMW8 372 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 A0A0B4J269 797 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 SNRPAP09012 282 aaKnown RBP13.9□□□□□ -0.18
NCDN-201ENST00000356090 CTC1Q2NKJ3 1217 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 RAB6CQ53S08 254 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 WDR78Q5VTH9 848 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 KRT27Q7Z3Y8 459 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 SH3TC2Q8TF17 1288 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 CPXM1Q96SM3 734 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 WDR83Q9BRX9 315 aaKnown RBP13.9□□□□□ -0.18
NCDN-201ENST00000356090 WWP1Q9H0M0 922 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 RAB6CQ9H0N0 254 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 PPCSQ9HAB8 311 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 STRIP2Q9ULQ0 834 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 CXorf49A8MYA2 514 aaPredicted RBP13.9□□□□□ -0.18
NCDN-201ENST00000356090 CCNG1P51959 295 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 ATXN3P54252 364 aaPredicted RBP13.9□□□□□ -0.18
NCDN-201ENST00000356090 BCAR1P56945 870 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 AP2B1P63010 937 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 PPP2R5DQ14738 602 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 GRAMD1BQ3KR37 738 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 SPDYE2Q495Y8 402 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 ZNF667Q5HYK9 610 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 POLNQ7Z5Q5 900 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 SLC26A11Q86WA9 606 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 RASSF3Q86WH2 238 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 PRPF31Q8WWY3 499 aaKnown RBP13.9□□□□□ -0.18
NCDN-201ENST00000356090 MMP19Q99542 508 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 LNPEPQ9UIQ6 1025 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 NR2E3Q9Y5X4 410 aa13.9□□□□□ -0.18
NCDN-201ENST00000356090 LYPLA1O75608 230 aaPredicted RBP13.89□□□□□ -0.19
NCDN-201ENST00000356090 DLDP09622 509 aaKnown RBP13.89□□□□□ -0.19
NCDN-201ENST00000356090 PDGFRAP16234 1089 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 RPL10AP62906 217 aaKnown RBP13.89□□□□□ -0.19
NCDN-201ENST00000356090 IGBP1P78318 339 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 CRADDP78560 199 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 BBS12Q6ZW61 710 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 KIAA0319LQ8IZA0 1049 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.89□□□□□ -0.19
NCDN-201ENST00000356090 GSTCDQ8NEC7 633 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 EBF4Q9BQW3 602 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 TAF1LQ8IZX4 1826 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 ZMPSTE24O75844 475 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 EDN1P05305 212 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 GJB1P08034 283 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 OSBPP22059 807 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 KCNA4P22459 653 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 PDE1BQ01064 536 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 STX3Q13277 289 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 PEX6Q13608 980 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 SGSM1Q2NKQ1 1148 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 TTC39BQ5VTQ0 682 aaPredicted RBP13.89□□□□□ -0.19
NCDN-201ENST00000356090 WDTC1Q8N5D0 677 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 PHC3Q8NDX5 983 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 PTCD3Q96EY7 689 aaKnown RBP13.89□□□□□ -0.19
NCDN-201ENST00000356090 ASCC2Q9H1I8 757 aaPredicted RBP13.89□□□□□ -0.19
NCDN-201ENST00000356090 FARP1Q9Y4F1 1045 aaPredicted RBP13.89□□□□□ -0.19
NCDN-201ENST00000356090 SYNJ2BP-COX16A0A087WUM0 186 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 MAGEA13PA6NCF6 341 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 VWA5AO00534 786 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 KIF3CO14782 793 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 STK10O94804 968 aaKnown RBP13.89□□□□□ -0.19
NCDN-201ENST00000356090 ASS1P00966 412 aaKnown RBP13.89□□□□□ -0.19
NCDN-201ENST00000356090 OATP04181 439 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 RBL1P28749 1068 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 YWHAEP62258 255 aaKnown RBP13.89□□□□□ -0.19
NCDN-201ENST00000356090 LRRC38Q5VT99 294 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 DRICH1Q6PGQ1 229 aaPredicted RBP13.89□□□□□ -0.19
NCDN-201ENST00000356090 TRIM50Q86XT4 487 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 ZNF398Q8TD17 642 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 ANKRD36BP1Q96IX9 119 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 IFT122Q9HBG6 1241 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 COX16Q9P0S2 106 aa13.89□□□□□ -0.19
NCDN-201ENST00000356090 DCAF8L1A6NGE4 600 aa13.88□□□□□ -0.19
NCDN-201ENST00000356090 KRT38O76015 456 aa13.88□□□□□ -0.19
NCDN-201ENST00000356090 SUPT20HL2P0C7V6 817 aa13.88□□□□□ -0.19
NCDN-201ENST00000356090 KCNA2P16389 499 aa13.88□□□□□ -0.19
NCDN-201ENST00000356090 PRKD1Q15139 912 aaPredicted RBP13.88□□□□□ -0.19
NCDN-201ENST00000356090 SUPT20HL1Q3ZLR7 823 aa13.88□□□□□ -0.19
NCDN-201ENST00000356090 TMPRSS6Q8IU80 811 aa13.88□□□□□ -0.19
NCDN-201ENST00000356090 KBTBD2Q8IY47 623 aa13.88□□□□□ -0.19
NCDN-201ENST00000356090 GPRASP2Q96D09 838 aa13.88□□□□□ -0.19
NCDN-201ENST00000356090 KCNK13Q9HB14 408 aa13.88□□□□□ -0.19
NCDN-201ENST00000356090 CYLDQ9NQC7 956 aa13.88□□□□□ -0.19
NCDN-201ENST00000356090 SEPT10Q9P0V9 454 aa13.88□□□□□ -0.19
NCDN-201ENST00000356090 TXNDC16Q9P2K2 825 aa13.88□□□□□ -0.19
NCDN-201ENST00000356090 SLC17A6Q9P2U8 582 aa13.88□□□□□ -0.19
NCDN-201ENST00000356090 AHCYL1O43865 530 aa13.88□□□□□ -0.19
NCDN-201ENST00000356090 C6orf222P0C671 652 aaPredicted RBP13.88□□□□□ -0.19
NCDN-201ENST00000356090 RARBP10826 455 aa13.88□□□□□ -0.19
NCDN-201ENST00000356090 ANPEPP15144 967 aa13.88□□□□□ -0.19
NCDN-201ENST00000356090 TGFB2P61812 414 aa13.88□□□□□ -0.19
NCDN-201ENST00000356090 TAP1Q03518 808 aa13.88□□□□□ -0.19
NCDN-201ENST00000356090 ASPHQ12797 758 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms